Cmc06g0165671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0165671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 17640877 .. 17641845 (-)
RNA-Seq Expression	Cmc06g0165671
Synteny	Cmc06g0165671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGACCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAACGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACTAAGACGACACGATTTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATATTGATAAGATTGTGGGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCTGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATAGGAATATGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAAAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGTGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATAAGAGAAAATCTAAAGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTTGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCACATGTGTTGCAAGAGCAACCTGTTGAATTAAAAGAAGATTTGAGTTAA

mRNA sequence

ATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGACCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAACGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACTAAGACGACACGATTTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATATTGATAAGATTGTGGGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCTGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATAGGAATATGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAAAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGTGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATAAGAGAAAATCTAAAGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTTGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCACATGTGTTGCAAGAGCAACCTGTTGAATTAAAAGAAGATTTGAGTTAA

Coding sequence (CDS)

ATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGACAGAGACCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAACGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACTAAGACGACACGATTTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATATTGATAAGATTGTGGGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCTGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATAGGAATATGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAAAGCATGTGTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGTGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATAAGAGAAAATCTAAAGATAGCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGAAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTTGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCACATGTGTTGCAAGAGCAACCTGTTGAATTAAAAGAAGATTTGAGTTAA

Protein sequence

MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQKAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQSSRTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS

Homology

[Close]

BLAST of Cmc06g0165671 vs. NCBI nr
Match: TYK05214.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 8.4e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1   MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
           MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 625 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 684

Query: 61  WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
           WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 685 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 744

Query: 121 KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
           KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 745 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 804

Query: 181 S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
           S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 805 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 864

Query: 241 DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
           DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 865 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 924

Query: 301 LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
           LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 925 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 960

[Close]

BLAST of Cmc06g0165671 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 8.4e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1   MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
           MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 230 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 289

Query: 61  WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
           WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 290 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 349

Query: 121 KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
           KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 350 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 409

Query: 181 S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
           S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 410 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 469

Query: 241 DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
           DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 470 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 529

Query: 301 LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
           LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 530 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 565

[Close]

BLAST of Cmc06g0165671 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 8.4e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 752  MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 811

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 812  WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 871

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 872  KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 931

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 932  SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 991

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 992  DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1051

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1052 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1087

[Close]

BLAST of Cmc06g0165671 vs. NCBI nr
Match: KAA0059912.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 8.4e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1   MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
           MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 420 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 479

Query: 61  WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
           WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 480 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 539

Query: 121 KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
           KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 540 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 599

Query: 181 S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
           S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 600 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 659

Query: 241 DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
           DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 660 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 719

Query: 301 LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
           LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 720 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 755

[Close]

BLAST of Cmc06g0165671 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 627.1 bits (1616), Expect = 8.4e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 859  MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 918

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 919  WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 978

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 979  KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1038

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 1039 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1098

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1099 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1158

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1159 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1194

[Close]

BLAST of Cmc06g0165671 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-42
Identity = 101/319 (31.66%), Postives = 165/319 (51.72%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C  CQ  K    +P G L P+P  E   E ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            +V+VDR +K    +P   + T +Q AR++  +++  +G P  I++D D  FTS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNN---- 180
                  +KFS  + PQTDGQ+ERT QT+E +L+        +W  H+ L++ +YNN    
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  -----------NYQSSRTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSY 240
                        Y  + +P+   E+  +     E  Q T    + ++E+L     + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKRRRNL-EFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELP 300
             D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1245

Query: 301  IELARI-HDVFHVSMLRKY 303
              +  +    FHVS L KY
Sbjct: 1246 DSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc06g0165671 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-42
Identity = 101/319 (31.66%), Postives = 165/319 (51.72%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C  CQ  K    +P G L P+P  E   E ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            +V+VDR +K    +P   + T +Q AR++  +++  +G P  I++D D  FTS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNN---- 180
                  +KFS  + PQTDGQ+ERT QT+E +L+        +W  H+ L++ +YNN    
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  -----------NYQSSRTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSY 240
                        Y  + +P+   E+  +     E  Q T    + ++E+L     + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKRRRNL-EFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELP 300
             D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1245

Query: 301  IELARI-HDVFHVSMLRKY 303
              +  +    FHVS L KY
Sbjct: 1246 DSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc06g0165671 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-42
Identity = 101/319 (31.66%), Postives = 165/319 (51.72%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C  CQ  K    +P G L P+P  E   E ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            +V+VDR +K    +P   + T +Q AR++  +++  +G P  I++D D  FTS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNN---- 180
                  +KFS  + PQTDGQ+ERT QT+E +L+        +W  H+ L++ +YNN    
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  -----------NYQSSRTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSY 240
                        Y  + +P+   E+  +     E  Q T    + ++E+L     + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKRRRNL-EFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELP 300
             D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1245

Query: 301  IELARI-HDVFHVSMLRKY 303
              +  +    FHVS L KY
Sbjct: 1246 DSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc06g0165671 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-42
Identity = 101/319 (31.66%), Postives = 165/319 (51.72%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C  CQ  K    +P G L P+P  E   E ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            +V+VDR +K    +P   + T +Q AR++  +++  +G P  I++D D  FTS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNN---- 180
                  +KFS  + PQTDGQ+ERT QT+E +L+        +W  H+ L++ +YNN    
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  -----------NYQSSRTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSY 240
                        Y  + +P+   E+  +     E  Q T    + ++E+L     + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKRRRNL-EFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELP 300
             D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1245

Query: 301  IELARI-HDVFHVSMLRKY 303
              +  +    FHVS L KY
Sbjct: 1246 DSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc06g0165671 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-42
Identity = 101/319 (31.66%), Postives = 165/319 (51.72%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            ++++I EYV  C  CQ  K    +P G L P+P  E   E ++MDF+  LP  SSG++ +
Sbjct: 946  IRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNAL 1005

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            +V+VDR +K    +P   + T +Q AR++  +++  +G P  I++D D  FTS+ W    
Sbjct: 1006 FVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFA 1065

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNN---- 180
                  +KFS  + PQTDGQ+ERT QT+E +L+        +W  H+ L++ +YNN    
Sbjct: 1066 HKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHS 1125

Query: 181  -----------NYQSSRTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSY 240
                        Y  + +P+   E+  +     E  Q T    + ++E+L     + K Y
Sbjct: 1126 ATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKY 1185

Query: 241  ADKRRRNL-EFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELP 300
             D + + + EFQ GD V +K +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Sbjct: 1186 FDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1245

Query: 301  IELARI-HDVFHVSMLRKY 303
              +  +    FHVS L KY
Sbjct: 1246 DSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc06g0165671 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.1e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 1160 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1219

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 1220 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1279

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 1280 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1339

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 1340 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1399

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1400 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1459

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1460 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1495

[Close]

BLAST of Cmc06g0165671 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.1e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 1198 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1257

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 1258 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1317

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 1318 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1377

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 1378 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1437

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1438 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1497

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1498 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1533

[Close]

BLAST of Cmc06g0165671 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.1e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 1198 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1257

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 1258 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1317

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 1318 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1377

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 1378 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1437

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1438 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1497

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1498 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1533

[Close]

BLAST of Cmc06g0165671 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.1e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 1198 MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 1257

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 1258 WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1317

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 1318 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1377

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 1378 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1437

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1438 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1497

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1498 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1533

[Close]

BLAST of Cmc06g0165671 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.1e-176
Identity = 309/336 (91.96%), Postives = 314/336 (93.45%), Query Frame = 0


Query: 1    MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKREHITMDFLFGLPRTSSGHDGI 60
            MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWK EHITMDFLFGLPRTSSGHDGI
Sbjct: 830  MKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGI 889

Query: 61   WVIVDRLTKTTRFIPIKMTSTLDQLARLYIDKIVGQYGVPVSIVSDRDLRFTSKFWPSLQ 120
            WVIVDRLTKTTRFIPIKMTSTLDQLARLY+DKIV QYGVPVSIVSDRD RFTSKFWPSLQ
Sbjct: 890  WVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 949

Query: 121  KAIGIWLKFSTSFHPQTDGQSERTIQTLEDMLKACVLQLKGSWDTHLPLMEFAYNNNYQS 180
            KA+G  LKFSTSFHPQTDGQSERTIQTLEDML+ACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 950  KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1009

Query: 181  S--------------RTPVCWNEVGEWKLVGPELVQITTNNIKLIRENLKIAQDRQKSYA 240
            S              RTPVCWNEVGE KLVGPELVQITTNNIKLIRENL+ AQDRQKSYA
Sbjct: 1010 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1069

Query: 241  DKRRRNLEFQVGDQVFLKLSPWRGVIRFERKGKLSPRYIGPYQITERVGPAAYRLELPIE 300
            DKRRRNLEFQVGDQVFLKLSPWRGVIRF RKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1070 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1129

Query: 301  LARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDLS 323
            LARIHDVFHVSMLRKYIPDPSHVLQ+QPVELKEDLS
Sbjct: 1130 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1165

[Close]

BLAST of Cmc06g0165671 vs. TAIR 10
Match: AT1G42190.1 (GAG/POL/ENV polyprotein )

HSP 1 Score: 42.4 bits (98), Expect = 8.3e-04
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 279 YRLELPIELARIHDVFHVSMLRKYIPDPSHVLQEQPVELKEDL 322
           Y+L+LP  +   H VFHVSMLRK I    +V+ E P +L E++
Sbjct: 2   YKLDLPTLMDAFHKVFHVSMLRKCITHQENVISEPPPDLLENM 44

The following BLAST results are available for this feature:

BLAST of Cmc06g0165671 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05214.1	8.4e-176	91.96	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053246.1	8.4e-176	91.96	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050493.1	8.4e-176	91.96	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0059912.1	8.4e-176	91.96	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0050527.1	8.4e-176	91.96	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0165671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.3e-42	31.66	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.3e-42	31.66	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.3e-42	31.66	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.3e-42	31.66	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.3e-42	31.66	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0165671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	4.1e-176	91.96	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	4.1e-176	91.96	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	4.1e-176	91.96	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	4.1e-176	91.96	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	4.1e-176	91.96	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of Cmc06g0165671 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42190.1	8.3e-04	46.51	GAG/POL/ENV polyprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 30..207 e-value: 2.0E-35 score: 123.9
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 6..180
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 29..192 score: 16.174978
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 30..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0165671.1	Cmc06g0165671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding