Cmc06g0165381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0165381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 17148521 .. 17150211 (+)
RNA-Seq Expression	Cmc06g0165381
Synteny	Cmc06g0165381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACTAGTAAACTACTCAGCCAGGGTACCTGGAGCATCTTGGCAAGCATAGTAGTTACAAGAGAACTAGAAGTTTCCCTGTCTTCTGAACCAGTGGTAAGGGAGTACCCTGATGTTTTCCCCGACAAGCTTCCAGGACTTCCATCTCCTAGGGAGATAGACTTCGCCATTGAGTTAGAGTCAGACACTGCTCCTATCTTGAGGATCCCTTACAGAATGGCCCCAGCTGAGCTAAAAGAGCTAAAGGTGCAATTGAAGGAGTTACTGGACAAGGGTTTTATTCGACCTAGTGTGTCACCTTGGAGAGCACCAGTGATGTTTGTGAAGAATAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAATCGCTATCCCTTGCCCAGGATTGATGATTTGTTCGATCAGTTGCAAGGAGCCACCGTCTTTTCTAAGATCGACCTGCGATCAGGCTACCACCAATTGAGGATCAGGGATAGTGATATTCCTAAGACTTCTTTTCGTACAAGATACAGACATTACGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTTTCATAGTTTTCATTGATGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCACCAGGTTTTGGAGACTCTTCGAGCTAATAAATTGTACGCCAAGTTCTCCAAGTGTGAGTTCTGGCTAAAGAAGGTGACTTTTCTCGGCCACGTGGTCTCCAGTTAGGGAGTTTCGTGGATCCAGAAAAGGTCGAAGCAGTTACCAGTTGGCCTCGACCGTCTACAGTTAGCGAGATTCATAGTTTTTTAGGTTTGGCAGGTTACTACAGGAGGTTTGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACCCAATTGACCAGGAAGGGGACTCCTTTTGTTTGGAGCCCAACTTGTGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTTGTGTCTGCACCAGTTCTAACAGTATCCGATGGATCTGGAAGTTTCGTGATCTATAGTGATGCCTCAAAGAAAGGACTGGATTGTGTTCTGATGCAGCAAGATAAGGTAGTTGCTTATACCTCTCGTCAGTTGAAGAGTCAAGAGCAAAACTACCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAGAGTACTGCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACAGCGAGATTTTATATCACCCAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGTTGCGCATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAATAGGGGAAGTGACCTCACAATTGGCTCAGGTTACCGTGCAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCTATTAGTAAAGGCAGGGCAAAGTGAGGATTTCTCCATATCCTCTGATGACGGACTTACTTTCGATGGACATTTGTGA

mRNA sequence

ATGAAGACTAGTAAACTACTCAGCCAGGGTACCTGGAGCATCTTGGCAAGCATAGTAGTTACAAGAGAACTAGAAGTTTCCCTGTCTTCTGAACCAGTGGTAAGGGAGTACCCTGATGTTTTCCCCGACAAGCTTCCAGGACTTCCATCTCCTAGGGAGATAGACTTCGCCATTGAGTTAGAGTCAGACACTGCTCCTATCTTGAGGATCCCTTACAGAATGGCCCCAGCTGAGCTAAAAGAGCTAAAGGTGCAATTGAAGGAGTTACTGGACAAGGGTTTTATTCGACCTAGTGTGTCACCTTGGAGAGCACCAGTGATGTTTGTGAAGAATAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAATCGCTATCCCTTGCCCAGGATTGATGATTTGTTCGATCAGTTGCAAGGAGCCACCGTCTTTTCTAAGATCGACCTGCGATCAGGCTACCACCAATTGAGGATCAGGGATAGTGATATTCCTAAGACTTCTTTTCGTACAAGATACAGACATTACGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTTTCATAGTTTTCATTGATGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCACCAGTTAGGGAGTTTCGTGGATCCAGAAAAGGTCGAAGCAGTTACCAGTTGGCCTCGACCGTCTACAGTTAGCGAGATTCATAGTTTTTTAGGTTTGGCAGGTTACTACAGGAGGTTTGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACCCAATTGACCAGGAAGGGGACTCCTTTTGTTTGGAGCCCAACTTGTGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTTGTGTCTGCACCAGTTCTAACAGTATCCGATGGATCTGGAAGTTTCGTGATCTATAGTGATGCCTCAAAGAAAGGACTGGATTGTGTTCTGATGCAGCAAGATAAGGTAGTTGCTTATACCTCTCGTCAGTTGAAGAGTCAAGAGCAAAACTACCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAGAGTACTGCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACAGCGAGATTTTATATCACCCAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGTTGCGCATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAATAGGGGAAGTGACCTCACAATTGGCTCAGGTTACCGTGCAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCTATTAGTAAAGGCAGGGCAAAGTGAGGATTTCTCCATATCCTCTGATGACGGACTTACTTTCGATGGACATTTGTGA

Coding sequence (CDS)

ATGAAGACTAGTAAACTACTCAGCCAGGGTACCTGGAGCATCTTGGCAAGCATAGTAGTTACAAGAGAACTAGAAGTTTCCCTGTCTTCTGAACCAGTGGTAAGGGAGTACCCTGATGTTTTCCCCGACAAGCTTCCAGGACTTCCATCTCCTAGGGAGATAGACTTCGCCATTGAGTTAGAGTCAGACACTGCTCCTATCTTGAGGATCCCTTACAGAATGGCCCCAGCTGAGCTAAAAGAGCTAAAGGTGCAATTGAAGGAGTTACTGGACAAGGGTTTTATTCGACCTAGTGTGTCACCTTGGAGAGCACCAGTGATGTTTGTGAAGAATAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAATCGCTATCCCTTGCCCAGGATTGATGATTTGTTCGATCAGTTGCAAGGAGCCACCGTCTTTTCTAAGATCGACCTGCGATCAGGCTACCACCAATTGAGGATCAGGGATAGTGATATTCCTAAGACTTCTTTTCGTACAAGATACAGACATTACGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTTTCATAGTTTTCATTGATGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCACCAGTTAGGGAGTTTCGTGGATCCAGAAAAGGTCGAAGCAGTTACCAGTTGGCCTCGACCGTCTACAGTTAGCGAGATTCATAGTTTTTTAGGTTTGGCAGGTTACTACAGGAGGTTTGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACCCAATTGACCAGGAAGGGGACTCCTTTTGTTTGGAGCCCAACTTGTGAGAGTAGCTTTCAGGAGCTCAAGCAGAAGCTTGTGTCTGCACCAGTTCTAACAGTATCCGATGGATCTGGAAGTTTCGTGATCTATAGTGATGCCTCAAAGAAAGGACTGGATTGTGTTCTGATGCAGCAAGATAAGGTAGTTGCTTATACCTCTCGTCAGTTGAAGAGTCAAGAGCAAAACTACCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTAGAGTACTGCTTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACAGCGAGATTTTATATCACCCAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGTTGCGCATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAATAGGGGAAGTGACCTCACAATTGGCTCAGGTTACCGTGCAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCTATTAGTAAAGGCAGGGCAAAGTGAGGATTTCTCCATATCCTCTGATGACGGACTTACTTTCGATGGACATTTGTGA

Protein sequence

MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIELESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQLGSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGLTFDGHL

Homology

[Close]

BLAST of Cmc06g0165381 vs. NCBI nr
Match: KAA0063403.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK11661.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 936.0 bits (2418), Expect = 1.4e-268
Identity = 483/536 (90.11%), Postives = 499/536 (93.10%), Query Frame = 0


Query: 1   MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
           MKTSKLLSQGTWSILASIV TREL+VSLSSEPVVREYPDVF D+LPGLPSPREIDFAIEL
Sbjct: 9   MKTSKLLSQGTWSILASIVDTRELKVSLSSEPVVREYPDVFSDELPGLPSPREIDFAIEL 68

Query: 61  ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
           E DTAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPWRAPV+FVK KDGSMR+CI
Sbjct: 69  EPDTAPISRTPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPVLFVKKKDGSMRICI 128

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFR RY
Sbjct: 129 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRIRY 188

Query: 181 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEE------ 240
           RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTF+ +F      +SK E   ++      
Sbjct: 189 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFWRLFELINCKFSKCEFWMKKVTFLGH 248

Query: 241 HLHQLGSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 300
            +   G  VDP+KVEAVTSWPRPSTVSEI SFLGLAGYYRRFVEDFSRIASPLTQLTRKG
Sbjct: 249 VVSSEGVSVDPKKVEAVTSWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 308

Query: 301 TPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQDKVVAYT 360
           TPFVWSP CESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGL CVLMQQ KVVAY 
Sbjct: 309 TPFVWSPACESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 368

Query: 361 SRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLEYCFTQKELNMRQR 420
           SRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS+EYCFTQKELNMRQR
Sbjct: 369 SRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSMEYCFTQKELNMRQR 428

Query: 421 RWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEV 480
           RWL+LVKDYD EILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEV
Sbjct: 429 RWLKLVKDYDYEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEV 488

Query: 481 TSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGLTFDGHL 531
           TSQLAQ+TVQPTLRQRIIVAQLNDPYLVEKRLLV+AGQSEDFSISSDDGLTFDG L
Sbjct: 489 TSQLAQLTVQPTLRQRIIVAQLNDPYLVEKRLLVEAGQSEDFSISSDDGLTFDGRL 544

[Close]

BLAST of Cmc06g0165381 vs. NCBI nr
Match: KAA0050011.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 923.7 bits (2386), Expect = 7.2e-265
Identity = 468/540 (86.67%), Postives = 491/540 (90.93%), Query Frame = 0


Query: 1   MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
           MK SKLLSQGTW ILAS+V TRE EVSLSSEPVVREYPDVFPD+LPGLP PREIDF IEL
Sbjct: 244 MKASKLLSQGTWGILASVVDTRESEVSLSSEPVVREYPDVFPDELPGLPPPREIDFTIEL 303

Query: 61  ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
           ES TA I R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 304 ESGTASISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 363

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
           DY+ELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FR+RY
Sbjct: 364 DYKELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 423

Query: 181 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
            HYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTE EHEEHL Q+ 
Sbjct: 424 EHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEPEHEEHLRQVL 483

Query: 241 ---------GSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQL 300
                    G  VDP K+EAVT+WPRPST+SEI SFL L GYYRRFV DFSRIA+PLTQL
Sbjct: 484 ETLRANRLEGVSVDPAKIEAVTNWPRPSTISEIRSFLDLVGYYRRFVTDFSRIANPLTQL 543

Query: 301 TRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQDKV 360
           T+KGTPFVWSP CESSFQELKQKLV APVL V DGSGSFVIYSDASKKGL CVLMQQ +V
Sbjct: 544 TKKGTPFVWSPACESSFQELKQKLVIAPVLIVPDGSGSFVIYSDASKKGLSCVLMQQGRV 603

Query: 361 VAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLEYCFTQKELN 420
           VAY SRQLKS EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL+Y FTQKELN
Sbjct: 604 VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIITDHKSLKYFFTQKELN 663

Query: 421 MRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVS 480
           MRQRRWLELVKDYD E+LYHPGKANVVADALSRKVAHSAALITKQAPLLRD ERAEIAVS
Sbjct: 664 MRQRRWLELVKDYDCEMLYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 723

Query: 481 IGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGLTFDGHL 531
           +GEVTSQLAQ++VQPTLRQRIIVAQLNDPYLVEKR LV+ GQ EDFSISSDDGLTF+G L
Sbjct: 724 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRL 783

[Close]

BLAST of Cmc06g0165381 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 917.5 bits (2370), Expect = 5.1e-263
Identity = 468/563 (83.13%), Postives = 491/563 (87.21%), Query Frame = 0


Query: 1    MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
            MK SKLLSQGTW ILAS+V  RE EVSLSSEPVVREYPDVF D+LPGLP PRE+DFAIEL
Sbjct: 533  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFSDELPGLPPPREVDFAIEL 592

Query: 61   ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
            E  TAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 593  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 652

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FR+RY
Sbjct: 653  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 712

Query: 181  RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
             HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTEAEHEEHLHQ+ 
Sbjct: 713  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 772

Query: 241  --------------------------------GSFVDPEKVEAVTSWPRPSTVSEIHSFL 300
                                            G  VDP K+EAVT+WPRPSTVSEI SFL
Sbjct: 773  ETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFL 832

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CESSFQELKQKLV+APVLTV DGSG
Sbjct: 833  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 892

Query: 361  SFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLY 420
            +FVIYSDASKKGL CVLMQQ KVVAY SRQLK  EQNYPTHDLEL AVVFALKIWRHYLY
Sbjct: 893  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLY 952

Query: 421  GEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAH 480
            GEKIQI+TDHKSL+Y FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVAH
Sbjct: 953  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1012

Query: 481  SAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLL 531
            SA LITKQ PLLRD ERAEIAVS+GEVTSQLAQ++VQPTLRQ+II AQLNDPYLVEKR +
Sbjct: 1013 SAVLITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRM 1072

[Close]

BLAST of Cmc06g0165381 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 917.1 bits (2369), Expect = 6.7e-263
Identity = 468/563 (83.13%), Postives = 490/563 (87.03%), Query Frame = 0


Query: 1   MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
           MK SKLLS GTW ILAS+V  RE EVSLSSEPVVREYPDVFPDKLPGLP PRE+DFAIEL
Sbjct: 64  MKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFAIEL 123

Query: 61  ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
           E  TAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 124 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FR+RY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
            HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTEAEHEEHLHQ+ 
Sbjct: 244 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 --------------------------------GSFVDPEKVEAVTSWPRPSTVSEIHSFL 300
                                           G  VDP K+EAVT+WPRPSTVSEI SFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE SFQELKQKLV+APVLTV DGSG
Sbjct: 364 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 SFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLY 420
           +FVIYSDASKKGL CVLMQQ KVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAH 480
           GEKIQI+TDHKSL+Y FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 543

Query: 481 SAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLL 531
           SAALITKQ PLLRD ERAEIAVS+GEVT+QLAQ+TVQPTLRQ+II AQLNDPYL EKR +
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 603

[Close]

BLAST of Cmc06g0165381 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 916.8 bits (2368), Expect = 8.8e-263
Identity = 467/563 (82.95%), Postives = 491/563 (87.21%), Query Frame = 0


Query: 1    MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
            MK SKLLSQGTW ILAS+V  RE EVSLSSEPVVREYPDVFPD+LPGLP PRE+DFAIEL
Sbjct: 498  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61   ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
            E  TAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 558  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
            DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FR+RY
Sbjct: 618  DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181  RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
             HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTEAEHEEHLHQ+ 
Sbjct: 678  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241  --------------------------------GSFVDPEKVEAVTSWPRPSTVSEIHSFL 300
                                            G  VDP K+EAVT+WPRPSTVSEI SFL
Sbjct: 738  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CESSFQELKQKLV APVLTV DGSG
Sbjct: 798  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361  SFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLY 420
            +FVIYSDASKKGL CVLMQQ KVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 858  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421  GEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAH 480
            GEKIQI+TDHKSL+Y FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVAH
Sbjct: 918  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

Query: 481  SAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLL 531
            SAALITKQ PLLRD ERAEIAVS+GEVT+QLAQ++VQPTLRQ+II AQLNDPYL EKR +
Sbjct: 978  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 1037

[Close]

BLAST of Cmc06g0165381 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-71
Identity = 148/411 (36.01%), Postives = 234/411 (56.93%), Query Frame = 0


Query: 72  YRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFV-KNKDGS----MRLCIDYRELN 131
           Y    A  +E++ Q++++L++G IR S SP+ +P+  V K +D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 132 KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRYRHYEFI 191
           ++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +    + KT+F T++ HYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 192 VMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHE------------- 251
            M FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH              
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 252 ---------EHLHQLGSFV-----------DPEKVEAVTSWPRPSTVSEIHSFLGLAGYY 311
                    E L Q  +F+           +PEK+EA+  +P P+   EI +FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 312 RRFVEDFSRIASPLTQLTRKGTPF-VWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIY 371
           R+F+ +F+ IA P+T+  +K       +P  +S+F++LK  +   P+L V D +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 372 SDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 431
           +DAS   L  VL Q    ++Y SR L   E NY T + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 432 IFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSR 444
           I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc06g0165381 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.7e-71
Identity = 154/465 (33.12%), Postives = 248/465 (53.33%), Query Frame = 0


Query: 36  EYPDVFPDKLPGLPSPREIDFAIELESDT---APILRIPYRMAPAELKELKVQLKELLDK 95
           E+P +F   L G+     ++ A++ E  T    PI    Y        E++ Q+ ELL  
Sbjct: 94  EFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 153

Query: 96  GFIRPSVSPWRAPVMFVKNK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 155
           G IRPS SP+ +P+  V  K     +   R+ +D++ LN VT+ + YP+P I+     L 
Sbjct: 154 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 213

Query: 156 GATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRYRHYEFIVMSFGLTNAPAVFMDLMNRVF 215
            A  F+ +DL SG+HQ+ +++SDIPKT+F T    YEF+ + FGL NAPA+F  +++ + 
Sbjct: 214 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDIL 273

Query: 216 KDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL---------------------------- 275
           ++ +     V+IDDI+++S+    H ++L  +                            
Sbjct: 274 REHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGY 333

Query: 276 -----GSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTR-- 335
                G   DP+KV A++  P P++V E+  FLG+  YYR+F++D++++A PLT LTR  
Sbjct: 334 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGL 393

Query: 336 ---------KGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCV 395
                       P     T   SF +LK  L S+ +L     +  F + +DAS   +  V
Sbjct: 394 YANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAV 453

Query: 396 LMQ----QDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHK 444
           L Q    +D+ +AY SR L   E+NY T + E+ A++++L   R YLYG   I+++TDH+
Sbjct: 454 LSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQ 513

[Close]

BLAST of Cmc06g0165381 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-68
Identity = 165/536 (30.78%), Postives = 276/536 (51.49%), Query Frame = 0


Query: 33  VVREYPDVFPD-KLPGLPSP-REIDFAIELESDTAPILRIPYRMAPAELKELKVQLKELL 92
           + +E+ D+  +     LP P + ++F +EL  +   +    Y + P +++ +  ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436

Query: 93  DKGFIRPSVSPWRAPVMFVKNKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 152
             G IR S +    PVMFV  K+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496

Query: 153 VFSKIDLRSGYHQLRIRDSDIPKTSFRTRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDF 212
           +F+K+DL+S YH +R+R  D  K +FR     +E++VM +G++ APA F   +N +  + 
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 213 LDTFFIVFIDDILIYSKTEAEHEEHL---------------------HQ-----LGSFVD 272
            ++  + ++DDILI+SK+E+EH +H+                     HQ     +G  + 
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 273 -------PEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF 332
                   E ++ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 333 VWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQ---DKV--VA 392
            W+PT   + + +KQ LVS PVL   D S   ++ +DAS   +  VL Q+   DK   V 
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 393 YTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLEYCFTQKE-- 452
           Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +   
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796

Query: 453 LNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIA 512
            N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I 
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI- 856

Query: 513 VSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGL 525
                  + + Q+++    + +++    ND  L+   LL    +  + +I   DGL
Sbjct: 857 -------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGL 895

[Close]

BLAST of Cmc06g0165381 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-68
Identity = 165/536 (30.78%), Postives = 276/536 (51.49%), Query Frame = 0


Query: 33  VVREYPDVFPD-KLPGLPSP-REIDFAIELESDTAPILRIPYRMAPAELKELKVQLKELL 92
           + +E+ D+  +     LP P + ++F +EL  +   +    Y + P +++ +  ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436

Query: 93  DKGFIRPSVSPWRAPVMFVKNKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 152
             G IR S +    PVMFV  K+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496

Query: 153 VFSKIDLRSGYHQLRIRDSDIPKTSFRTRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDF 212
           +F+K+DL+S YH +R+R  D  K +FR     +E++VM +G++ APA F   +N +  + 
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 213 LDTFFIVFIDDILIYSKTEAEHEEHL---------------------HQ-----LGSFVD 272
            ++  + ++DDILI+SK+E+EH +H+                     HQ     +G  + 
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 273 -------PEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF 332
                   E ++ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 333 VWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQ---DKV--VA 392
            W+PT   + + +KQ LVS PVL   D S   ++ +DAS   +  VL Q+   DK   V 
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 393 YTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLEYCFTQKE-- 452
           Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +   
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796

Query: 453 LNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIA 512
            N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I 
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI- 856

Query: 513 VSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGL 525
                  + + Q+++    + +++    ND  L+   LL    +  + +I   DGL
Sbjct: 857 -------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGL 895

[Close]

BLAST of Cmc06g0165381 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-68
Identity = 165/536 (30.78%), Postives = 276/536 (51.49%), Query Frame = 0


Query: 33  VVREYPDVFPD-KLPGLPSP-REIDFAIELESDTAPILRIPYRMAPAELKELKVQLKELL 92
           + +E+ D+  +     LP P + ++F +EL  +   +    Y + P +++ +  ++ + L
Sbjct: 377 IYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGL 436

Query: 93  DKGFIRPSVSPWRAPVMFVKNKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAT 152
             G IR S +    PVMFV  K+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T
Sbjct: 437 KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 496

Query: 153 VFSKIDLRSGYHQLRIRDSDIPKTSFRTRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDF 212
           +F+K+DL+S YH +R+R  D  K +FR     +E++VM +G++ APA F   +N +  + 
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556

Query: 213 LDTFFIVFIDDILIYSKTEAEHEEHL---------------------HQ-----LGSFVD 272
            ++  + ++DDILI+SK+E+EH +H+                     HQ     +G  + 
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 616

Query: 273 -------PEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPF 332
                   E ++ V  W +P    E+  FLG   Y R+F+   S++  PL  L +K   +
Sbjct: 617 EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 676

Query: 333 VWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQ---DKV--VA 392
            W+PT   + + +KQ LVS PVL   D S   ++ +DAS   +  VL Q+   DK   V 
Sbjct: 677 KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 736

Query: 393 YTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLEYCFTQKE-- 452
           Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +   
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 796

Query: 453 LNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIA 512
            N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I 
Sbjct: 797 ENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI- 856

Query: 513 VSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGL 525
                  + + Q+++    + +++    ND  L+   LL    +  + +I   DGL
Sbjct: 857 -------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGL 895

[Close]

BLAST of Cmc06g0165381 vs. ExPASy TrEMBL
Match: A0A5A7V5N1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00330 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 6.8e-269
Identity = 483/536 (90.11%), Postives = 499/536 (93.10%), Query Frame = 0


Query: 1   MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
           MKTSKLLSQGTWSILASIV TREL+VSLSSEPVVREYPDVF D+LPGLPSPREIDFAIEL
Sbjct: 9   MKTSKLLSQGTWSILASIVDTRELKVSLSSEPVVREYPDVFSDELPGLPSPREIDFAIEL 68

Query: 61  ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
           E DTAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPWRAPV+FVK KDGSMR+CI
Sbjct: 69  EPDTAPISRTPYRMAPAELKELKVQLQELLDKGFIRPSVSPWRAPVLFVKKKDGSMRICI 128

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFR RY
Sbjct: 129 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRIRY 188

Query: 181 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEE------ 240
           RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTF+ +F      +SK E   ++      
Sbjct: 189 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFWRLFELINCKFSKCEFWMKKVTFLGH 248

Query: 241 HLHQLGSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 300
            +   G  VDP+KVEAVTSWPRPSTVSEI SFLGLAGYYRRFVEDFSRIASPLTQLTRKG
Sbjct: 249 VVSSEGVSVDPKKVEAVTSWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 308

Query: 301 TPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQDKVVAYT 360
           TPFVWSP CESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGL CVLMQQ KVVAY 
Sbjct: 309 TPFVWSPACESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLGCVLMQQGKVVAYA 368

Query: 361 SRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLEYCFTQKELNMRQR 420
           SRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS+EYCFTQKELNMRQR
Sbjct: 369 SRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSMEYCFTQKELNMRQR 428

Query: 421 RWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEV 480
           RWL+LVKDYD EILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEV
Sbjct: 429 RWLKLVKDYDYEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVSIGEV 488

Query: 481 TSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGLTFDGHL 531
           TSQLAQ+TVQPTLRQRIIVAQLNDPYLVEKRLLV+AGQSEDFSISSDDGLTFDG L
Sbjct: 489 TSQLAQLTVQPTLRQRIIVAQLNDPYLVEKRLLVEAGQSEDFSISSDDGLTFDGRL 544

[Close]

BLAST of Cmc06g0165381 vs. ExPASy TrEMBL
Match: A0A5A7U8T4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001960 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 3.5e-265
Identity = 468/540 (86.67%), Postives = 491/540 (90.93%), Query Frame = 0


Query: 1   MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
           MK SKLLSQGTW ILAS+V TRE EVSLSSEPVVREYPDVFPD+LPGLP PREIDF IEL
Sbjct: 244 MKASKLLSQGTWGILASVVDTRESEVSLSSEPVVREYPDVFPDELPGLPPPREIDFTIEL 303

Query: 61  ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
           ES TA I R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 304 ESGTASISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 363

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
           DY+ELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FR+RY
Sbjct: 364 DYKELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 423

Query: 181 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
            HYEFIVMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTE EHEEHL Q+ 
Sbjct: 424 EHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEPEHEEHLRQVL 483

Query: 241 ---------GSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQL 300
                    G  VDP K+EAVT+WPRPST+SEI SFL L GYYRRFV DFSRIA+PLTQL
Sbjct: 484 ETLRANRLEGVSVDPAKIEAVTNWPRPSTISEIRSFLDLVGYYRRFVTDFSRIANPLTQL 543

Query: 301 TRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFVIYSDASKKGLDCVLMQQDKV 360
           T+KGTPFVWSP CESSFQELKQKLV APVL V DGSGSFVIYSDASKKGL CVLMQQ +V
Sbjct: 544 TKKGTPFVWSPACESSFQELKQKLVIAPVLIVPDGSGSFVIYSDASKKGLSCVLMQQGRV 603

Query: 361 VAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLEYCFTQKELN 420
           VAY SRQLKS EQNYPTHDLELAAVVFALKIWRHYLYGEKIQI TDHKSL+Y FTQKELN
Sbjct: 604 VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIITDHKSLKYFFTQKELN 663

Query: 421 MRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDLERAEIAVS 480
           MRQRRWLELVKDYD E+LYHPGKANVVADALSRKVAHSAALITKQAPLLRD ERAEIAVS
Sbjct: 664 MRQRRWLELVKDYDCEMLYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 723

Query: 481 IGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLLVKAGQSEDFSISSDDGLTFDGHL 531
           +GEVTSQLAQ++VQPTLRQRIIVAQLNDPYLVEKR LV+ GQ EDFSISSDDGLTF+G L
Sbjct: 724 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRL 783

[Close]

BLAST of Cmc06g0165381 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 917.5 bits (2370), Expect = 2.5e-263
Identity = 468/563 (83.13%), Postives = 491/563 (87.21%), Query Frame = 0


Query: 1    MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
            MK SKLLSQGTW ILAS+V  RE EVSLSSEPVVREYPDVF D+LPGLP PRE+DFAIEL
Sbjct: 533  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFSDELPGLPPPREVDFAIEL 592

Query: 61   ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
            E  TAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 593  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 652

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FR+RY
Sbjct: 653  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 712

Query: 181  RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
             HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTEAEHEEHLHQ+ 
Sbjct: 713  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 772

Query: 241  --------------------------------GSFVDPEKVEAVTSWPRPSTVSEIHSFL 300
                                            G  VDP K+EAVT+WPRPSTVSEI SFL
Sbjct: 773  ETLRANNLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFL 832

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CESSFQELKQKLV+APVLTV DGSG
Sbjct: 833  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 892

Query: 361  SFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLY 420
            +FVIYSDASKKGL CVLMQQ KVVAY SRQLK  EQNYPTHDLEL AVVFALKIWRHYLY
Sbjct: 893  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLY 952

Query: 421  GEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAH 480
            GEKIQI+TDHKSL+Y FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVAH
Sbjct: 953  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1012

Query: 481  SAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLL 531
            SA LITKQ PLLRD ERAEIAVS+GEVTSQLAQ++VQPTLRQ+II AQLNDPYLVEKR +
Sbjct: 1013 SAVLITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRM 1072

[Close]

BLAST of Cmc06g0165381 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 3.3e-263
Identity = 468/563 (83.13%), Postives = 490/563 (87.03%), Query Frame = 0


Query: 1   MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
           MK SKLLS GTW ILAS+V  RE EVSLSSEPVVREYPDVFPDKLPGLP PRE+DFAIEL
Sbjct: 64  MKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFAIEL 123

Query: 61  ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
           E  TAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 124 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 183

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FR+RY
Sbjct: 184 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 243

Query: 181 RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
            HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTEAEHEEHLHQ+ 
Sbjct: 244 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 303

Query: 241 --------------------------------GSFVDPEKVEAVTSWPRPSTVSEIHSFL 300
                                           G  VDP K+EAVT+WPRPSTVSEI SFL
Sbjct: 304 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 363

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CE SFQELKQKLV+APVLTV DGSG
Sbjct: 364 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 423

Query: 361 SFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLY 420
           +FVIYSDASKKGL CVLMQQ KVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 424 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 483

Query: 421 GEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAH 480
           GEKIQI+TDHKSL+Y FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVAH
Sbjct: 484 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 543

Query: 481 SAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLL 531
           SAALITKQ PLLRD ERAEIAVS+GEVT+QLAQ+TVQPTLRQ+II AQLNDPYL EKR +
Sbjct: 544 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 603

[Close]

BLAST of Cmc06g0165381 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 916.8 bits (2368), Expect = 4.3e-263
Identity = 467/563 (82.95%), Postives = 491/563 (87.21%), Query Frame = 0


Query: 1    MKTSKLLSQGTWSILASIVVTRELEVSLSSEPVVREYPDVFPDKLPGLPSPREIDFAIEL 60
            MK SKLLSQGTW ILAS+V  RE EVSLSSEPVVREYPDVFPD+LPGLP PRE+DFAIEL
Sbjct: 498  MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61   ESDTAPILRIPYRMAPAELKELKVQLKELLDKGFIRPSVSPWRAPVMFVKNKDGSMRLCI 120
            E  TAPI R PYRMAPAELKELKVQL+ELLDKGFIRPSVSPW APV+FVK KDGSMRLCI
Sbjct: 558  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRTRY 180
            DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FR+RY
Sbjct: 618  DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181  RHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFFIVFIDDILIYSKTEAEHEEHLHQL- 240
             HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+F IVFIDDILIYSKTEAEHEEHLHQ+ 
Sbjct: 678  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241  --------------------------------GSFVDPEKVEAVTSWPRPSTVSEIHSFL 300
                                            G  VDP K+EAVT+WPRPSTVSEI SFL
Sbjct: 738  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSP CESSFQELKQKLV APVLTV DGSG
Sbjct: 798  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361  SFVIYSDASKKGLDCVLMQQDKVVAYTSRQLKSQEQNYPTHDLELAAVVFALKIWRHYLY 420
            +FVIYSDASKKGL CVLMQQ KVVAY SRQLK  EQNYPTHDLELAAVVFALKIWRHYLY
Sbjct: 858  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

Query: 421  GEKIQIFTDHKSLEYCFTQKELNMRQRRWLELVKDYDSEILYHPGKANVVADALSRKVAH 480
            GEKIQI+TDHKSL+Y FTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVAH
Sbjct: 918  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 977

Query: 481  SAALITKQAPLLRDLERAEIAVSIGEVTSQLAQVTVQPTLRQRIIVAQLNDPYLVEKRLL 531
            SAALITKQ PLLRD ERAEIAVS+GEVT+QLAQ++VQPTLRQ+II AQLNDPYL EKR +
Sbjct: 978  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRM 1037

[Close]

BLAST of Cmc06g0165381 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-15
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 232 HEEHLHQLGSFVDPEKVEAVTSWPRPSTVSEIHSFLGLAGYYRRFVEDFSRIASPLTQLT 291
           H   +   G   DP K+EA+  WP P   +E+  FLGL GYYRRFV+++ +I  PLT+L 
Sbjct: 35  HRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELL 94

Query: 292 RKGTPFVWSPTCESSFQELKQKLVSAPVLTVSDGSGSFV 331
           +K +   W+     +F+ LK  + + PVL + D    FV
Sbjct: 95  KKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc06g0165381 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063403.1	1.4e-268	90.11	reverse transcriptase [Cucumis melo var. makuwa] >TYK11661.1 reverse transcripta...	[more]
KAA0050011.1	7.2e-265	86.67	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	5.1e-263	83.13	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	6.7e-263	83.13	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	8.8e-263	82.95	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0165381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	1.9e-71	36.01	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	5.7e-71	33.12	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	2.6e-68	30.78	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.6e-68	30.78	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.6e-68	30.78	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0165381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5N1	6.8e-269	90.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7U8T4	3.5e-265	86.67	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001960 PE...	[more]
A0A5A7TG62	2.5e-263	83.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7V6R2	3.3e-263	83.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7V4E4	4.3e-263	82.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]

BLAST of Cmc06g0165381 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.9e-15	38.38	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 329..394 e-value: 4.2E-8 score: 35.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..194 e-value: 1.1E-75 score: 255.6
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 241..449 coord: 2..183
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 241..449 coord: 2..183
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 330..445 e-value: 5.15956E-54 score: 176.529
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..247 e-value: 3.18793E-77 score: 239.034
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 110..243 e-value: 1.7E-20 score: 73.5
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 327..423 e-value: 3.8E-32 score: 110.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..239 e-value: 1.1E-75 score: 255.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 249..328 e-value: 5.7E-31 score: 108.4
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0165381.1	Cmc06g0165381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding