Cmc06g0163931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0163931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	double-stranded RNA-binding protein 4-like isoform X3
Location	CMiso1.1chr06: 14051433 .. 14064843 (-)
RNA-Seq Expression	Cmc06g0163931
Synteny	Cmc06g0163931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCATAATCCATCCTCCAAATAGATACTATGGCACCCCATCATTGTCTAATCTTATAATTATTGTAATCATTTTTGTCCGATAACTCATTCTCTCCCCAAACACATAGTTGTCAATATTAAAAGACCCTCACCGTGAAGAGAACGAAAATATCACCGGACATTCATTCATTCATTCATAGCCATTGGCTGGTCGTTCCCATTTCACCAATTTGTTCTCCTCCAATTCCATTACCCTCGATAATAATCGACGATTATGGAAGCATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCGGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTACAAAACTTCCATACTCTTCAGTCTCAACCAAATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCTGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCCCCTAATCTCTCTGATCCTACTCGTAAGTGTAAGGCATTGTTGCCCGTCGTTCCGTTGAGGATGCGTTTTTGTTCTTGGTGTTTGGTTATAATTGTTTAGTGTTTTCATTTCAGCAAATATCTGCTATATTAGATGGATTTCCTCTACATTTCGTGTAGTTAAATTCTCTATCTGTTTTTGTTTTCTGTTAGAGAGAGAAGCAAATACGAGCCATTTGTGTGTGTTGAAAGAATTATTTTGTTCTCAGTATGTGTCTATGAGGTCCTGAGAATTCAATCATAAGTTGCTATGTTTTACTTCCATTTCCATCTTCTTTCCACAAATTTTGGATGGTAGGTTATTTTGTAAGTTAGAATACTGGTAGTTGTGTGGCGATGATCTAGATATTCCTTCCTTGTTCGGTCTTTAGAAAACAATTTGGAGAATTCTCTTGAAAAAAATTTCTACCGGGTTTAATTCTGGCCTAGCTTCTTAACCATAATGAATTGCCTTAATGGTAAAAAAAGAAGACTTAATATCAAAAAATGGCTAAGAACTTATGGGTTCAATTCATGGGAACCACCTATCTAGAAATTAATTTACTACGAGTTTCTTTGACACCAAAATGTTGTAGGGTCAGACGGATTGTTTCGTGGATTAGTCGAAGTGTGCATAAGCTGACCCACACCCACATATATAAAAAAAAGTTCTAGCCTATCATCTTGCCCTCGATCCTTAGTGGTGTGTTCTTCGCAAGAAGAATAGTGAGACTATTTATTCACCTTCACCTCATAAGGCTGCTTTTTCTACATTCTGCTGTGTGCCTTTTGGGAGATGGAGAAACTAAAGATTAGTCGCTTCAGGCATTGGTGGATTTGACTTATAATGGGGATGCTATCTTTGCAGACCAGTTTCTTGACAATTCTTTGGTGGATTTGATATTATTTCTTTTTTCTCACGTGATTTTTCTTTCTCTATAATTAAAGATGTGGGATCCTTTTCTTATAGTTTCTTTTGCCAGATTTGCTTGTTGGTTAGGCACTCAGGGCTATGCTTTTGTATGGTCTTTTTGTTCTTCCATTTCCCTCAATGACCATAACAGAAATGAAAGGCAAAAAGAATAGTTGTTAACTGAAGTGGAGGGTTTTGCATTGGGTTTTTCTGAGTACTTGTAACCTGACGTTGCAAATTGAGAAACCTGTAATTTTCTACCGTCGTTCGTACACGTGGACTCTTCTAATGTTCCTCCTTTCACTTTTGGGCTTCAATTTGTTTGAGTATTACTTCAATGCCTCCATCTTTATGTATCACACTCTCATCACACAAACAGAGAGAATTAAAATATTTCAAAAATGGTGTTAGAAGAATTTGGTGGGGTGTACACAGATAGCTGTTTTTCTAGATGCACATGAGTATTTTTTTTATTCATATTTTGTTCTAGTTGTGTAATACAAGACAAAGGTCCCCTCGGTTCTATTGTGCACAAATTTGTTATTTGGTGGATTTTTGTTCTTTATAAGAATGGAAGAGAAACCAATGTTATGGTTTTGCAGAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAGGATTGCAGTACCAGTATACCAGACTATTGATGAGGGGTCCCCAGGTCTGCCTAAATTCAGGTCAACTGTGTTGCTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAATTGCTTTTGAGTACATATCAAAAAAGACAAAGGACGATGCCTTTCTTCTACTTCGTGAGGTACAAGTTATATAGTGATATTGAAAATTGATTTGTGGCCTTTAATTTTCAATATGCGTATAACTGTGCTTCTTTCTTTCTTTCTTTATTTCATTTCTTAAAATTTTAGTACAACATATGTGGTGGAAACTTTAGATTTAAGCCTTCTGACCGTAATGGAAGGAATAGATGCCTTCACCACTATATTATGCTCACGTGGCCATAATTTTGCTTGCTTAGTTGATTATAAATGCAATTCTACGATGAGATTTCCTATATGGATTGGTGGTTTGTTACAAATAAGATTTTCTGCATGGAAAAAACTTTTGTTGTAACAATAACTTATTTGAAGCAAACAGAAGCATTCATTTCCTTCCGCCTGATATATCTTCTTCTTGTTCTTGGATGAAGAATTCTTTTTAATAGTCGCATTGCATTTAATCACTTAAGTTGGGTAAGATTTCTCATTGTCGTAGTCATAAGTCATAGACCTCAAAGGTTGGAATTTATGTAATTGATTTTAGTGATAAAGCATTTAGTTTGCCTGAATAAGAAGTTTGGAAATGATGCCCTCGGAAATTTGGTCGTTGGAAGCTGAATGCTTTTGTTTGTACTTTGTGGTGAATAGGGATAGGATTCAAATGTACGAGAATGAAAGAATAGTTTAGTTTTATTTATTTTATTAGAAAAATCTGAGCTTTCTTTCAGAATTATGACAGTGCATACAAATAAGTAGCCTCGATAGGAATGGAAGAACTACAAGGTTTCAAATCCAAAAGAATAAGGCCCTAACCAAGCTATTATGTAATATCCTCCCACGACTCCTCTTCGAAGGTCTCCTCTCCCTCTAAAAATTCTACTATTTCTTTCGAGCTACATATCACAAATAATTGAAAAAGGAAACAAAAAAAAAAGAAAAGAAAAAGAAAAAAAGAAAAAAGAAAAACGTATTAAACGTGAGTTTCCATCTCAAAATCTACCAACAATAAGAGGAGTAACTCCTACCATAGCACCAATGATCTTAAAAGAATATTTCCTAATCTCTCTCGATGTTGCTCCTTCCTACCCTTTCTCCCAGTCTTACTAGACCCTTTCTCCAACACAACGATGAGGCCTCTCTGATCACCACATATGCATCACAGCCCCCAGATAATCGAGAGAAAAATTCATTATGGCAGTAGATTCTATGTATAGAGACTCATATATTTTTTTTAAGTAGAAACAAGTTTCGTTTATTAATAAATTAATAATATAGGGACAAAAGCTCATGGTACAAAAGGATTGCAGTGAGCGAAAAGAGAGACATATCAATTGATGCACCGGACATCTCGACTAGGTCGTCTTTTTTACGGAGGCTGACACGTTAAAATACCTAAAGCTACGAGAAAAATTCTTTTAAAAATTTACTGTTGGTTATTATTGTATTTATTTATTTACTTTCTTATGAAATCAACAACTTTTATTAAGAAAAGAATACAAGGACGTCAAAAAAAAAAAAAAAAAAGAAAAGAAAACCAAGCTCACAAAAAGGAAGCTCTCCCTGAGAAATGGGCTTGAGTTACTTGAAATGGTACTTATAGAATAATTATAAAAGATCCTCAAAACTAGAACAAATAAAGTGACATGAAAAGTACCAGGAGAACAAACATCACTAGAGGTCCCTCTCCAATCCTAAAAAAACTTTGTTATTTTGTTTGCCCCAAAGATCCCATAATATAGTGCACATCCCAGAAAACCATGAGAACCAACTTTTCGAAAACCATGAGAACCAACTTTTCTTTCGAAGGACGAATGGAGGAGGAACTTCTTAATTATATCATTGGTGTCTTTTTGTCGAGCAAGTGAGAGGCCAAATGTTGGGAGAAAAACAAAGATTCATCGTGGCTTTGATGTTTTCCCTTGAGTCCAGCTCTCTACCATATATATTAATTATGGATGGGCTTTTGTGGAAGAAGTCTTTGCTAGTGGGACCTTTTTGTTGTATTCTTTGTTGAAATGAAGACTCGAATCACATTCTTTAGAGTTGCATCTTTTAGGAGTTTGATTTCGAGCTTGCTCGTCGGGGAGATGTTTGGGAGACAATCGGGGAGTTCCTTCTCCATTCACCTTTTAGAGAGAAACCAATTTCTTTTGTTAGTTGAGTTATATGCTATTTTGTAGGATATTGGGGTGGGGGAGGGGAGGGTGTGGAGCGGTACACTCTTTACATAGTTTGTAGTTTAAAATCATATTCTATTTAATAAAGTTGTTATTGAAGAATTATTAGTGAAGTTGATAGTACAAACGATTTGATTCTAAACCGTTCATGTACATGAAAGTGGGGACATCCCATGTAAAGAGTGTTACATAAGACTGAATAGTGAAATAGTCACTTTTACGTCATAACATCGTTTACTGTGTAAAACTAGCTATTTTGATTATTGATGACCTAGGTAATTTAATTTTAATCTTGACCTAACAAGGAACTCTTGTTCACACGGGATTATCCTTAGATTTGCATAGCTGAAGGCAACTCATCAGCGTTGGTCCAATAAGCCTTCCATTTCAGGGGTAAGATCGGGTAGATAGCTGGGGACATAGGATGCAAGATAGAATTCTTTTTTGACCACTTTAGAGTTAGTAGATAGGTTGTTCCCTTATGCACTAAGTCCATGTTTATGATTCGAATTATTCGAACTAGGTAAGGAGAGAAAAATCGACAAGTAAATGTGATATAATTGTCGGTTATCAGTTTAGAGATGAAGTTTTATGTTTAAATGTGATTTAAATATAAAAAATATGAATGCATATTCATATTTAGAAGCTCGAAAATGATGGAAATGGTCAAAATTGAAAAAAGTCAAAGGGTTGACTTTTGACTTTGAAAAGTCAAACTTTAACCGGCGATATATTCAAATGTTATTTGAATTTCGAGAAAATGAATGTGTATTCATGTTCGGAAAGTTGAAATTAGTCAAGACAAACAAAATCGTAAAAAGTCAAAATGTTGACTTTTTGGTCATAGTTTGACTACGACTAATTTTAAGAAAAAACCATTTTGCTCTTAGTGGGAAAATCCAACAAATTTGTTAGTAGGCTATGTGTTGTTGGACTTTGTTGAAGAACAAACATGCATATTGCATGGCTTTTTCTTATAATTTGTGTTTTCAAAATGATTTTTGGGTTGGCCCTTTTGGTTACTCTCTGAAGTGGGCTGGATTTTCCACTTTTGGTTTGTAAAATTCAATTTTTCTTCGCCAAGGTATCTCTAAACCCTAAGCCCATATCCTCAATTTCCATCTCTTTCTCTCTTGGTTCCATCATCCATTGGGTTCCAAAATCCCGTTTTTAGATCGGAGAATAGTAGGTCAACTTTAGTGGTGGTCTGGTTCGTCTTTGGATGGAGAATCGAGCGATTACAGAGCTACAAAGGTGACATTTCACTTAACCCTACTTTTGGTTTTATTTAGGGAATCTACATGTTAATTTAGTGCAATTAGAGTAAAATTGATCCAGTTTTCGTTGTGCTTGTCTTATGTTTCCATTACCTGGTGATGTTTGGTTCTTGGTAGGGATGCAATCGGTTCGACTTAGCTCGGCTTGGGTCTCGAACTGAAACCGAACTGCCTTATATTACTATGGAAATGGGAAAATCTCACCGAACTGCCTATGAATACTAATCGAACTGATGAGAACTAGTTTCTTTAGTTCGGTTTCTGGTTCTCATTAATAATGACTGGTTTTGTCCCTCCAAGCGAGGGCCCATAAGCCCATTTCATGTTATTGGATCAGGCCCAAAGAAAGTCAAGGAAATTTGTGGAACTCGTGTGTAAGCATATTAAAAAATAAAAAATTTGTGTTCACCCAGACTCGAACATGCGCATAAGAGCATTTAATTGAATGGCACTGCTACTAGAGATGCGTCTTTGCATTGGTTAAAATATTGATTTTTAATATAGTTATAGTTTTTCAGTCAGCTTGGTTATGGTTTATTTGGCCAGAACCAAACCTTTATCGGTTTTTATTGGTTTTCAATTTGTCCTTGCACTCTAGTCCTTGGTGAGGTTTGATGTTTCTTTTTGGGCTTGATCTCAAATACTTATTTGTAAGTATCCTCTAAGTAGCATTTTACATGGAAACTCTTTCTTTAGAGGGGGTTTGTCGACTTGCTTTTTTTTGTTGCTCTTGTGTTCTTTCATATTTTTTCTCTCAATGAAAGCAATTTTTAGATCAAAATTTATATATTTTATTAGTACAGCTCACTTGCAATGTCTTATGTTGCCTCTTGCATAAAGGCGATTATGAAACTTGTCACCTTAAGGTGTGCCCTTTGTTAATTGATTCTTGTTATTAATTGTCATTAATATGGTAGGATTGGTTACTTTGGGTAAGAATTAGTGGGCTTAGTCCATTGGGGAGATTTACCCTAAATATTCTTTCCTTTTTTTTTTATCTCTTTATACTTTTCTATTTATTTCCCCTCTTGTACCTATTGTATGATTATCAAAAAATAATAAAATAAAAACATCGTGGTTTTTCTCCCGGTTCTCAGGTTTCCATGTAAGCTTGGTTTTGTGTTTATTGCTTTCAATACTTTGTTATCAAGTTGTTAGGTTAGTTATATGCTTCAAATTTATTTGTCCATCGGCCTAAAGTTGACTTAAGAGCTCATCTAGCATATTTGTTGGGTATCCTCGGGTAATAATAGGATATGAGCTCTATGATATGACTAAGAATTCTTTCTTTGTATCCAAAGATGTCCTATTCTTCGTAGATTTGTTTCCCTTCCACAAATTTGGAGACACTACCCGTCTTACCTGGGTCTACCTGTGTTTACCTTTCATTGATGATCATACTCGTTATACCTCGGTCTACCTTATCACCGATAAATCTAAAGTTTCCTCTCTTTTTCAAAACTTATATCACATCATTGAAACACAATTCCATAAAAAAAATTGCTATTTTTCGAAGTGATAATTGTCGAGAATTCCAAAACCATAACTTAGTGAATTTCTAGCCTCCAAGGGGATTGTTCATCAAAACTCGTGCGCCTACACTCCTTTACAAAATGGAGTGGCCGAGCGAAAAAACCGTCACCTTCTGTAAGTAGCCGTTCCCTTATGCTTTCCACTTACTTTCTTTCATGCCTGTGGGGAGATGCTATTCTTATACTAGCTCGTTTAATCAATAGAATGCCTTCTCGTATCCTCCACCTTTACCCCTTATAATGTCTTAAGGAGTCCTATCCCTCTACTCGTCTTGGTTTTTCAGTGGGGTAGGAACCTCGAGTGTCAGGTCGCCTTTGATGGTTTGAAGCAAGCCACGATTGAGGGGCCAAGTCTTGGGATCGCCGATGCGACCAAGCCTCCCAAAGTTGAAGCCGAGCAATTCAACTATATGCTTGGAGAATATTTGCATCATTTTGTTGATGGTAGACAATGGAATGGGGTTCAGCTACTGAATGTAGTCCAATTCAGTCACAGTACTCAGATAGATTCGTTGATCAGAAGAATTCAATTTGAGATTAATGGTAGTAGGCATTCTGTATTGTCGCCACTCGCTGATGGCCCTTATATAGGGAACAACCCTCAAGTTCACAGAGTTGAAAAGGAATGGGAACCGATGGCTGACATCGCTCGAGTGTGCCTAGAAGATGCCCTCTTGAGTTCGAGTGGATGGCCAAGCTTCCTATCAAGGGTGCAACAACGTTGTACGGTTATCTGTCAACCTGGAACAGGAAGAAGATAGAGAAGTCAAGGAAGTCCTTGCTAACAGAGTAAGGAAAGGTAGAAGGCCCACGAGAGAGATACATAAATTCCTAGTGAAGTGGAAGAACCCCCTCATGGAGGTAACAAGCGGAGAACATGTCGAAGATTTTTGAAGCGTGGAAGCAGAAGACCGAAGAGCTCCAGCTTTGCCAGTTGACAGGGACGTCAACCGTTTAAGTGGGGGAGAATGTCCCGGGCATACTTGTCCAAAGTGTTGTTTACCTATGGCCCTATGCCCGAATAACCCTAAATCACTTTGTCTTTATGTCTTATAAGTAGTTTAGTCTATTTCTTTCGTTTTCGTGTCGTCGAGCCACAGTGTGACATTTCGGTTTTTTCATATGCAAGCCTGCCAAGGCCAAAAATCTTAATATATACTGTAGAGGGTAGCACACTACTTGAACCCCCGTCTAAGCCTTGTCGCACCCTTTGCAATCTAAGCTATTTTCTTTGCAATTGACAGTCTTCAATGTTTTCTTTTATGAAGTTTTTAACAATTTATTTTCTCTCTCCCGTTTTATAAAACAATTTTCCCAAGAACGTGGAGGGAGGCTACATCATACCGCGAGTATGTCTGCGGATTTCGAATATTGAACGGCTGACTTGTTGATCGAGCATAACAAGTGCCGCACAATTGTGTTTGAAAGGTTACGATTGTGACACCCAGCGCCGTGAGACCCACCATCGAATTCATAGATAACTCCACAATGGGACTGAAACTGACTTCCAGCTTGGCTCCCTGGTTCACTATACCTTCCATCTCAGTGTCTTCAAAGTTTTCGGATACCACATAGAATCAAAGTTCCTTGTTTTTGCAGCGATGTCCCTTACTAAATGGTTCGTCACATCTATAGCACAAGCCTTTATCTCGTCTCGCCTGAAGTTCCGAATCTGTCCATCGTCGAAAAGGCTGCTGGCGTCGGCCTCCTCCTTCGATTACGTTAGATTGTAACGCATTTGAATTGTTTTGATAGGGGGAGATTTTCTTGGCAATTGTTACCATTTTTGAGGTAGGGTTTTTCGAAATTTTTGGTGTAGGTTTTTGGGCCATTTCCATCTCTCATACACAGGCTTTGACTGCTTTTGGCCATCTCATTTTTTTCCTCTGCTAACTAGGCTGCCTCCATCATATCCTCAAGGCCCACGGCCCACATGGAGAACACTTCTGTCTTAATTATTGGATCCAACCCATTTGTAAAAGTTCCCTCCAATACATCTTCCGCTATCTCCGGCAATGGTGCCGATAATTCTTCAAATCGCTGCAAATACTCCTTCACCGTCCCTTCCTGTTTGATCTCAAGGAATCTCGCGCACGTCGTTTCGTGTTCTCTACTCCGAAACCGGTTATACATTCTTTCCTTCAACTCCTTCCATGATTTGAATTGCTTCCGATTTTCTGCCCACCTAGACCAGCTTTGGCCCTTTCCCTCCAAACTCACAACAGCGATTTTCAACTTCTCAAGTTCATTCAGAATATGCATTTGGAAATAATGCTCTGCTCTATGGAACCAACCATCCGGGTCTTCCCCATTGAAAATGGGTATCTCCAGTTTTTTAAACTTGATTCGATCCTGTCTGGCCCTATTTCTATGCTCATAGATGTTTCTCCCTCATCCGCGTCCTCTTCGACAACTTCTTCAGTTCAGACCTTCCTCTTTCCGGTGCTTATCTCGGTTAGTTCCGATCCTCCCAGTTGCCTCTGACGGTCTTCGTACATCGCTGTCAACATTGTGTGCATTTTCTCCACGTTTTTCTCCAAGATCGGCAGCCTTTGAACCTCTTGTTTAATCGCTTCAATCTCGGCTTCTGAAGCGGTCAAACGTTCCTCTATCAGTTTTTGCGTCATTTTCTTCCACCTCCCCAGATCATAACCAATGTTATGTTTCAGGTTCCTGCTATAAATATATCTAACACGCTAACAGAACACAGAACAGTATAACTGCCACACACACAATTTAGTTATGAGAGGAGAAGAGATATAGATATATATACTCAATTTGGATAATCAAACCACAAAAAGAGTTCCAAAATAGTTATCAGCCAAATAAGAGGGTTGCTCTCTCCCCAATGAACAACATTTATTAAAAATACCAAAATATTTTGGTGATCAACCCTAGCACCAAAAACCTAAATATATACCCTCTTCTGCTGCTGCCACGTATAGTTAGGACCGCTAGTCATCCTAACAACCATGTTGTTTAGGTTGAAATACCCTTTTTACCCCTCCTTTGGTAAACTTGGGTGATTGGAGGCCCAGCAGGGGCATGCCTTGACACTTGACAATCCATTTCAGGCTATTGTATTTTCTTACGAAACTCATTAGTTTTATGGAAATGAAGAAGCAAGTCACTGCTTTGAGATCATTTGCAGAGGCAAAATATAGAGCCTTGGCATCTGTAACGAGTGAACTTATATGGCTTTCTCAACTTCTAATTGATCTACACATTCAGCATATGTTACCAAAAACTATAAACAACTATGTTTTGTGACAACCAAGCTGCCATTGCTATTGCATCCAATCCTACCTTCCATGATCAGACAAAGCACATAGAAATTGATTGCCACTTTGTAAGAGACAAGATCGTTTGATGGCTTCTTGAAAGTATTGCCAATTTGATCATCCTTACAACTCGTTGTCATGTTTACCAAGGCATTACCAGACGCTGTTTTGTCAAAACTTTTATTCAAGTTGGGTTTCCTTGATGTCTATATTCCAACTTGAGGAGTATTAAAATGATGCCTTGTAAATAATCGATTCTTTTCATTAATTGTCGTTAATCTGGTAGGATTGGTTAATTTGTGATTAAGTTGTTCATATTAGTTATCAAGATCAGTTTTTCTCTCTCCACCCTATATATACGGCTTTATCCTTGTATTTAAATTTAAGTGGAAATTAAGACATTTAATGAGAAGTAACTCCATTTATGAGAAATAGCCCCTTTTATATTCAGCGTATATTAATATTACCCCTTGCAGTTTGAAAACATTGTTAAATACTAGCATTTTACCAATACTGAGGTTAAATATTGACACGTTGAAAAGAAAACGTATATATTGGGATGTTGAAGTACTTTTTGATTTGATTGGCTTCATATCTCATATACAAACTAACTTCATATCTCATATACATACTATGTCACTTGTTCTTTTTTCAGGATTTGATATTATGTAAGTCCATTTTGTCTGAATATACGGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACCATAAAGGCTCGGTTCCATTGTTCCAGTCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTAGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGGTATTTAATTGTTGTAAACTAGTACTAAATTATTTCGAAATATTTGGTGCCTTGAATAAGTTTATTATTTTTTTTAAAAAAAAACAACTATAAGGATAACAATTATTATTATTTTGTAGAAGATGCAATAAATATTAAATCACAAAAAACTCTTGCGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATACCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGATAAAAATGTTAAAGATGCTGTTTCAGACAGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCTATTTCGACCTGAATTTAGTTCAACAAAACCGGAAGGATCATCCCCTCTAGTGAGACTCCCAATAGAATTTGTGCCTTCAACTTTAGAGGTGCCTGTTGGTGATCATGCAACAACTGGGTCTAAAAGGAGATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGTAATTTTCTTTTCATGAAACTTCATCCAACATGTATATTTTCATTGGTTGGGGGTTTTGTTGTCGTTGTAATTATAAATTTTGATAATTTACAGTTAAGAACTCCACTGCGCATTTATTTTATGGTTTTTATTACATAATTGTTTACAATAAACACCAGTCTTGTTACAACTAGAGCTAATCAATTTGCATGTTCATGGAAACAAGAAAATCAATCTAAATTTCTGTGGTAGGACTACTAGGCTGCAATTTACTTCAATGAAAAAGTGAAGTGATTGATATCCTTTCAAGGTAAGGTGTGGATTTAAATCATGATGGTAGTCACCTAAGATACTATAATATCTTACAACTTTCTTAATTCTCAATGTAGTATCAAGTAAGATTTGATAGTTGTGCCTATGATTAATATAGATTTGTTTAACTTATTCTGGTGCCCACAGTTGTTAAAAATGCACAAAAACTGAGGGGCCTTTGTTTTGTCTACAATATGATGTGTGGTATGGATAGTAAATGAATTCAAATGTGTGATTAGTTGGAGAGAAGTTACTCTTGTATTATTGGGCTATATGATAGGAGAGATGGCATGTCCCCTCAAGACTTCTGCTATTGCTGTGTTCTTAAATTATATTAACTTAGGTTCCATATGTGTAAGTTATTTCCATCGTATAACTAAATCTCCTTTTTGCTAAAAATGACCAGGGTGGCTACCGAAACGAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCAATGACTGTGAAGTGACCTGTACTATAAGTACTCATCTGCTTCAAAGGTAACATTTTAGAGTAGTTCTTGGGCATAAATACCATGAATTCAAGATCACATTTTTGTAGTAGGTCCATGTTTTCTACAAGACTTTAGGTTAAGTTGGTCTCGTCATTCATATAATTCTCTGACACTGGCCGTGCGAGTATACAACCAGTCAGTTCAAATGTTAATACTAAAGGTAGCTTTGTAGGTTGTCCTTGGATAATCATACTATTAACATTAAGCTTTCTCCTCGCTGTTTCGTTATTAATATGATGCTTCAAATTCATTGCTTTAGTATCTGTCAATGCAGGGGTTTGAAATAATATCGCATTGGGCTTTTTGGCCGGAAAAGCGATTTTGGCATTAGAAGAGAGAATGCAATTGCTTTGGGAATGTCAAATGATAGCTCCACTAGAAAGGTTCTTGTAATTGCGTTCACAAAAACTAAGCATGTTTATTAACGACTTGAATAAGGGTTTAGGCAGTCTAGGTTTTTTAAAAACCTGTTTCTGGTGCAGCTCTAGGTTTAGAAGTCTGTTTTTATTGCAGACTTGGGAAGCTTTAGAAGCGAAGGCAAGAAATGTTGGGTTGTGAAAGATTTAGTTGTATTCAAGTAATGGTTGGATTTTAGGTTAGCTTAAATTTTGTTGACCATTTCGGTTGGGTTTGGTGTAGTCAGTTTTTAACTTTAGTTTTTGAAAATTTTATGAACATTTCTTCTGCATTCAAATTTAAATTTCCTTATTTCTTTTATCTATTTGCTTTTCCT

mRNA sequence

TGTCATAATCCATCCTCCAAATAGATACTATGGCACCCCATCATTGTCTAATCTTATAATTATTGTAATCATTTTTGTCCGATAACTCATTCTCTCCCCAAACACATAGTTGTCAATATTAAAAGACCCTCACCGTGAAGAGAACGAAAATATCACCGGACATTCATTCATTCATTCATAGCCATTGGCTGGTCGTTCCCATTTCACCAATTTGTTCTCCTCCAATTCCATTACCCTCGATAATAATCGACGATTATGGAAGCATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCGGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTACAAAACTTCCATACTCTTCAGTCTCAACCAAATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCTGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCCCCTAATCTCTCTGATCCTACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAGGATTGCAGTACCAGTATACCAGACTATTGATGAGGGGTCCCCAGGTCTGCCTAAATTCAGGTCAACTGTGTTGCTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAATTGCTTTTGAGTACATATCAAAAAAGACAAAGGACGATGCCTTTCTTCTACTTCGTGAGGATTTGATATTATGTAAGTCCATTTTGTCTGAATATACGGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACCATAAAGGCTCGGTTCCATTGTTCCAGTCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTAGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGATGCAATAAATATTAAATCACAAAAAACTCTTGCGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATACCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGATAAAAATGTTAAAGATGCTGTTTCAGACAGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCTATTTCGACCTGAATTTAGTTCAACAAAACCGGAAGGATCATCCCCTCTAGTGAGACTCCCAATAGAATTTGTGCCTTCAACTTTAGAGGTGCCTGTTGGTGATCATGCAACAACTGGGTCTAAAAGGAGATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGGTGGCTACCGAAACGAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCAATGACTGTGAAGTGACCTGTACTATAAGTACTCATCTGCTTCAAAGGGGTTTGAAATAATATCGCATTGGGCTTTTTGGCCGGAAAAGCGATTTTGGCATTAGAAGAGAGAATGCAATTGCTTTGGGAATGTCAAATGATAGCTCCACTAGAAAGGTTCTTGTAATTGCGTTCACAAAAACTAAGCATGTTTATTAACGACTTGAATAAGGGTTTAGGCAGTCTAGGTTTTTTAAAAACCTGTTTCTGGTGCAGCTCTAGGTTTAGAAGTCTGTTTTTATTGCAGACTTGGGAAGCTTTAGAAGCGAAGGCAAGAAATGTTGGGTTGTGAAAGATTTAGTTGTATTCAAGTAATGGTTGGATTTTAGGTTAGCTTAAATTTTGTTGACCATTTCGGTTGGGTTTGGTGTAGTCAGTTTTTAACTTTAGTTTTTGAAAATTTTATGAACATTTCTTCTGCATTCAAATTTAAATTTCCTTATTTCTTTTATCTATTTGCTTTTCCT

Coding sequence (CDS)

ATGGAAGCATCCGGTACAGTTGAAGCAGGTGCACCGCAACAATCTCCATTCCGGTCCGACTCAGTTCCAACTGTTGTTACCCCTCCTATTCCGGTACAAAACTTCCATACTCTTCAGTCTCAACCAAATATTCATCCTCCATCTGTTTTACCGGACTTAGTTCTGATTCCAAGTGCGGCTCCAGCTCCGATTCCGTCCCCTAATCTCTCTGATCCTACTCAAATCTTCGTGTACAAAAATCATTTGCACGAGTATGCTCAAAAGGCAAGGATTGCAGTACCAGTATACCAGACTATTGATGAGGGGTCCCCAGGTCTGCCTAAATTCAGGTCAACTGTGTTGCTTGATGAGGTACATTATGTGTCTCCTAATACCTTCCGTAATCGAAGGGCGGCTGAGCAAGATGCTGCGAGAATTGCTTTTGAGTACATATCAAAAAAGACAAAGGACGATGCCTTTCTTCTACTTCGTGAGGATTTGATATTATGTAAGTCCATTTTGTCTGAATATACGGACAAAATGGGTTTGGAAAGACCTATATACACAACTAAACACCATAAAGGCTCGGTTCCATTGTTCCAGTCCACCTTGGTTTTTGATGGTGTGGTTTATACTAGTGATCTTAGTAGGACTAAGAAAGAGGCAGAGCAATTGGCAGCACGTGCAGCTATTCTTTCACTTCATGATGCAATAAATATTAAATCACAAAAAACTCTTGCGGACATCATTGCATCTAAAGTCAGATTCCATGCAATGTTGCAAAAGGTTAAAGATTCACATTTTTCTCAAATTCAACCGAAATCCATACCTGAAAATACAGTGGAACGTGTTGCAATGACAGTTAATGAAGATAAAAATGTTAAAGATGCTGTTTCAGACAGTGGAGTGGTATGTGGTGCAATTTCAGAGGCTTGTCCAACTTCTCTATTTCGACCTGAATTTAGTTCAACAAAACCGGAAGGATCATCCCCTCTAGTGAGACTCCCAATAGAATTTGTGCCTTCAACTTTAGAGGTGCCTGTTGGTGATCATGCAACAACTGGGTCTAAAAGGAGATCTAAGAACAAGAGAAAGGCACGTAAGAAACTGTGTATGGAGAACCGGGTGGCTACCGAAACGAGTCAAACTGCTGCTCCTTGCTCCGTAGCTCAATGA

Protein sequence

MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLADIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKARKKLCMENRVATETSQTAAPCSVAQ

Homology

[Close]

BLAST of Cmc06g0163931 vs. NCBI nr
Match: XP_008457067.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo])

HSP 1 Score: 740.7 bits (1911), Expect = 6.2e-210
Identity = 382/384 (99.48%), Postives = 383/384 (99.74%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
           DIIASKVRFHAMLQKVKDSHFSQIQPKS+PENTVERVAMTVNEDKNVKDAVSDSGVVCGA
Sbjct: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300

Query: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360
           ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR
Sbjct: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360

Query: 361 KKLCMENRVATETSQTAAPCSVAQ 385
           KKLCMEN VATETSQTAAPCSVAQ
Sbjct: 361 KKLCMENGVATETSQTAAPCSVAQ 384

[Close]

BLAST of Cmc06g0163931 vs. NCBI nr
Match: XP_008457066.1 (PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo])

HSP 1 Score: 736.1 bits (1899), Expect = 1.5e-208
Identity = 382/385 (99.22%), Postives = 383/385 (99.48%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH DAINIKSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKS+PENTVERVAMTVNEDKNVKDAVSDSGVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCMENRVATETSQTAAPCSVAQ 385
           RKKLCMEN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 385

[Close]

BLAST of Cmc06g0163931 vs. NCBI nr
Match: XP_011651405.1 (double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 655.2 bits (1689), Expect = 3.5e-184
Identity = 337/384 (87.76%), Postives = 358/384 (93.23%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLHDA N KSQK L 
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHDATNPKSQKALG 240

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
           DIIASKVRFHAMLQKVKDS+FSQ QPKS+PENTVERVAMTVNE K +KDAV D G+VCGA
Sbjct: 241 DIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCGA 300

Query: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360
           ISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKAR
Sbjct: 301 ISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKAR 360

Query: 361 KKLCMENRVATETSQTAAPCSVAQ 385
           KKLCMENRVATETSQTAAPCSVA+
Sbjct: 361 KKLCMENRVATETSQTAAPCSVAR 384

[Close]

BLAST of Cmc06g0163931 vs. NCBI nr
Match: XP_004149792.1 (uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus] >KAE8650625.1 hypothetical protein Csa_011062 [Cucumis sativus])

HSP 1 Score: 650.6 bits (1677), Expect = 8.5e-183
Identity = 337/385 (87.53%), Postives = 358/385 (92.99%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           ME SGTVEAGAPQQSPF SDSVPTVVTPPIPV+N +T Q QP+IHPPSVLPDLV IPSAA
Sbjct: 1   MEESGTVEAGAPQQSPFPSDSVPTVVTPPIPVENSNTFQPQPDIHPPSVLPDLVPIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSD TQIFVYKNHLHEY QKA+IAVPVYQTIDEGSP LPK+RSTV++DEVHY
Sbjct: 61  PAPIPSPNLSDHTQIFVYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAAR+AFEYISKKTKDDAFLLLREDL+LCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240
           YTTKH++GSV  FQSTLVFDGVVYTSDL RTKKEAEQLAARAAILSLH DA N KSQK L
Sbjct: 181 YTTKHNQGSVAFFQSTLVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKAL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
            DIIASKVRFHAMLQKVKDS+FSQ QPKS+PENTVERVAMTVNE K +KDAV D G+VCG
Sbjct: 241 GDIIASKVRFHAMLQKVKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGMVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTS F+PEFS+TKP+GSSPL+RLPIEFV STLE PVG HAT GSKR+SKNKRKA
Sbjct: 301 AISEACPTSQFQPEFSATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKRKSKNKRKA 360

Query: 361 RKKLCMENRVATETSQTAAPCSVAQ 385
           RKKLCMENRVATETSQTAAPCSVA+
Sbjct: 361 RKKLCMENRVATETSQTAAPCSVAR 385

[Close]

BLAST of Cmc06g0163931 vs. NCBI nr
Match: XP_008457068.1 (PREDICTED: double-stranded RNA-binding protein 4-like isoform X3 [Cucumis melo])

HSP 1 Score: 620.9 bits (1600), Expect = 7.2e-174
Identity = 331/384 (86.20%), Postives = 331/384 (86.20%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH------------ 240

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
                                                   VNEDKNVKDAVSDSGVVCGA
Sbjct: 241 ----------------------------------------VNEDKNVKDAVSDSGVVCGA 300

Query: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360
           ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR
Sbjct: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 332

Query: 361 KKLCMENRVATETSQTAAPCSVAQ 385
           KKLCMEN VATETSQTAAPCSVAQ
Sbjct: 361 KKLCMENGVATETSQTAAPCSVAQ 332

[Close]

BLAST of Cmc06g0163931 vs. ExPASy Swiss-Prot
Match: Q6YW64 (Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB4 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-23
Identity = 74/194 (38.14%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 58  SAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDE 117
           S AP P P P+ +       YK+ L EY Q+A   +P+Y T  +G     KF+STV++D 
Sbjct: 26  SPAPLPPPPPHCN-------YKSKLQEYLQQANKQLPIYCTKCKGEHHQLKFKSTVMVDG 85

Query: 118 VHYVSPNTFRNRRAAEQDAARIAFEYISKKTK-----DDAFLLLREDLILCKSILSEYTD 177
             + S    R  + AEQDAA++A++ + ++ +      D F L+ +D++  KSIL EYT 
Sbjct: 86  EEFSSTFCHRRVKDAEQDAAKVAYDTLLERKETETDDTDVFELIDQDVVFSKSILHEYTT 145

Query: 178 KMGLERPIYTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAIN 237
           K   ++P Y+    +GSV  + S++ F G  YT   +R KK+AEQ AARAA+ SL  A N
Sbjct: 146 KTKTDQPEYSVTKTEGSVTPYVSSVSFAGHTYTGGAARNKKDAEQKAARAAVKSLL-ATN 205

Query: 238 IKSQKTLADIIASK 247
             S   +A I+ SK
Sbjct: 206 YTS---MAKIVRSK 208

[Close]

BLAST of Cmc06g0163931 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.6e-22
Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 0


Query: 58  SAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDE 117
           + +PAPI +         +V+K+ L EYAQKA +  P Y T  EG    P F+STV+++ 
Sbjct: 16  NTSPAPIGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTSKEGPSHEPVFKSTVVINN 75

Query: 118 VHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLE 177
             Y S   F NR+AAEQ AA +A   I K    +A +   ++  LCK++L EY  KM   
Sbjct: 76  TSYGSLPGFSNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKNLLQEYAQKMNYA 135

Query: 178 RPIY-TTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSL 228
            P Y  TK   G  P F  T+   G+ Y    +RTKK+AE  AAR A+L++
Sbjct: 136 IPSYICTKPASGLAP-FLCTVEIGGIQYIGAAARTKKDAEIKAARTALLAI 185

[Close]

BLAST of Cmc06g0163931 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.0e-21
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 70  SDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNR 129
           S  +  +V+K+ L EYAQK ++  PVY+ + EG      F+STV+LD V Y S   F NR
Sbjct: 8   SGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR 67

Query: 130 RAAEQDAARIAFEYISKKTK-DDAFLLLREDLILCKSILSEYTDKMGLERPIYTTKHHK- 189
           +AAEQ AA +A   ++K ++          +  LCK++L EY  KM    P+Y  +  + 
Sbjct: 68  KAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVET 127

Query: 190 -GSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSL 228
            G V  F  T+   G+ YT   +RTKK+AE  A R A+L++
Sbjct: 128 LGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAI 168

[Close]

BLAST of Cmc06g0163931 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.0e-21
Identity = 70/183 (38.25%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 46  PPSVLPDLVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPG 105
           PP+ LP      + +PAP  +         +V+K+ L EYAQKA +  P Y T  EG   
Sbjct: 4   PPTPLPPET--ANTSPAPNGATAGIRVENCYVFKSRLQEYAQKAGLQTPEYHTFKEGPSH 63

Query: 106 LPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKS 165
            P F+STV+++   Y S   F NR+AAEQ AA +A   I K    +A +   ++  LCK+
Sbjct: 64  EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKN 123

Query: 166 ILSEYTDKMGLERPIY-TTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAI 225
           +L EY  KM    P Y  TK   G  P F  T+   G+ Y    +RTKK+AE  AAR A+
Sbjct: 124 LLQEYAQKMNYAIPSYICTKSASGLAP-FICTVEIGGIQYIGAAARTKKDAEIKAARTAL 183

Query: 226 LSL 228
           L++
Sbjct: 184 LAI 183

[Close]

BLAST of Cmc06g0163931 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.7e-21
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 0


Query: 46  PPSVLPDLVLIPSAAPAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPG 105
           PP+ LP      + +PAP  +         +V+K+ L EYAQK  +  P Y T  EG   
Sbjct: 4   PPTPLPPET--ANTSPAPNGATAGIRVENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPSH 63

Query: 106 LPKFRSTVLLDEVHYVSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKS 165
            P F+STV+++   Y S   F NR+AAEQ AA +A   I K    +A +   ++  LCK+
Sbjct: 64  EPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCKN 123

Query: 166 ILSEYTDKMGLERPIY-TTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAI 225
           +L EY  KM    P Y  TK   G  P F  T+   G+ Y    +RTKK+AE  AAR A+
Sbjct: 124 LLQEYAQKMNYAIPSYICTKSASGLAP-FICTVEIGGIQYIGAAARTKKDAEIKAARTAL 183

Query: 226 LSL 228
           L++
Sbjct: 184 LAI 183

[Close]

BLAST of Cmc06g0163931 vs. ExPASy TrEMBL
Match: A0A1S3C4R2 (uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 3.0e-210
Identity = 382/384 (99.48%), Postives = 383/384 (99.74%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
           DIIASKVRFHAMLQKVKDSHFSQIQPKS+PENTVERVAMTVNEDKNVKDAVSDSGVVCGA
Sbjct: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300

Query: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360
           ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR
Sbjct: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360

Query: 361 KKLCMENRVATETSQTAAPCSVAQ 385
           KKLCMEN VATETSQTAAPCSVAQ
Sbjct: 361 KKLCMENGVATETSQTAAPCSVAQ 384

[Close]

BLAST of Cmc06g0163931 vs. ExPASy TrEMBL
Match: A0A1S3C485 (uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 736.1 bits (1899), Expect = 7.4e-209
Identity = 382/385 (99.22%), Postives = 383/385 (99.48%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH-DAINIKSQKTL 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH DAINIKSQKTL
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHEDAINIKSQKTL 240

Query: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300
           ADIIASKVRFHAMLQKVKDSHFSQIQPKS+PENTVERVAMTVNEDKNVKDAVSDSGVVCG
Sbjct: 241 ADIIASKVRFHAMLQKVKDSHFSQIQPKSMPENTVERVAMTVNEDKNVKDAVSDSGVVCG 300

Query: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA
Sbjct: 301 AISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360

Query: 361 RKKLCMENRVATETSQTAAPCSVAQ 385
           RKKLCMEN VATETSQTAAPCSVAQ
Sbjct: 361 RKKLCMENGVATETSQTAAPCSVAQ 385

[Close]

BLAST of Cmc06g0163931 vs. ExPASy TrEMBL
Match: A0A1S3C4M5 (double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496837 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.5e-174
Identity = 331/384 (86.20%), Postives = 331/384 (86.20%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH------------ 240

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
                                                   VNEDKNVKDAVSDSGVVCGA
Sbjct: 241 ----------------------------------------VNEDKNVKDAVSDSGVVCGA 300

Query: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360
           ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR
Sbjct: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 332

Query: 361 KKLCMENRVATETSQTAAPCSVAQ 385
           KKLCMEN VATETSQTAAPCSVAQ
Sbjct: 361 KKLCMENGVATETSQTAAPCSVAQ 332

[Close]

BLAST of Cmc06g0163931 vs. ExPASy TrEMBL
Match: A0A5A7V1Q3 (Double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00670 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 6.2e-171
Identity = 323/368 (87.77%), Postives = 323/368 (87.77%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA
Sbjct: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
           PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY
Sbjct: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI
Sbjct: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH            
Sbjct: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLH------------ 240

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
                                            VERVAMTVNEDKNVKDAVSDSGVVCGA
Sbjct: 241 ---------------------------------VERVAMTVNEDKNVKDAVSDSGVVCGA 300

Query: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 360
           ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR
Sbjct: 301 ISEACPTSLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKAR 323

Query: 361 KKLCMENR 369
           KKLCMENR
Sbjct: 361 KKLCMENR 323

[Close]

BLAST of Cmc06g0163931 vs. ExPASy TrEMBL
Match: A0A6J1F5U3 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442377 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 1.2e-145
Identity = 283/385 (73.51%), Postives = 316/385 (82.08%), Query Frame = 0


Query: 1   MEASGTVEAGAPQQSPFRSDSVPTVVTPPIPVQNFHTLQSQPNIHPPSVLPDLVLIPSAA 60
           +E SGTVEA   QQS F  DS   VV   IPV+N +T Q + +  PP VLPD +LIPS+A
Sbjct: 2   VEESGTVEAVPQQQSSFPPDSASAVVPAVIPVENSNTPQLESDTRPPPVLPDAILIPSSA 61

Query: 61  PAPIPSPNLSDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHY 120
            AP+ SP  SD TQ+F+YKNHLHEY QK+RI +PVYQT DEGS G+PK+RSTV++DEVHY
Sbjct: 62  SAPVSSPKPSDLTQLFLYKNHLHEYTQKSRIPLPVYQTFDEGSQGIPKYRSTVVVDEVHY 121

Query: 121 VSPNTFRNRRAAEQDAARIAFEYISKKTKDDAFLLLREDLILCKSILSEYTDKMGLERPI 180
           VSPNTFRNRRAAEQDAARIA EYISKK KDD F+LL EDL+LCKSILSEYT KM L+RP+
Sbjct: 122 VSPNTFRNRRAAEQDAARIALEYISKKAKDDGFVLLHEDLMLCKSILSEYTVKMSLKRPM 181

Query: 181 YTTKHHKGSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLA 240
           YTTK H+GSVP+FQSTLVFDGVVYT D+SR+KKEAEQLAARAAILSLHDA N KSQKTLA
Sbjct: 182 YTTKQHEGSVPIFQSTLVFDGVVYTGDISRSKKEAEQLAARAAILSLHDAGNPKSQKTLA 241

Query: 241 DIIASKVRFHAMLQKVKDSHFSQIQPKSIPENTVERVAMTVNEDKNVKDAVSDSGVVCGA 300
           +IIASKVR HAM+QKVKDSH SQIQPK +P+NTVE V  TVNEDK V  A+ D+ V CGA
Sbjct: 242 EIIASKVRLHAMMQKVKDSHPSQIQPKYMPDNTVEHVTTTVNEDKEVNGAILDNVVACGA 301

Query: 301 ISEACPT-SLFRPEFSSTKPEGSSPLVRLPIEFVPSTLEVPVGDHATTGSKRRSKNKRKA 360
           ISE CPT S   PEF S KPE SSP  RLPIE VPST E PVGD A TGSK+RSKNKRKA
Sbjct: 302 ISEICPTISHLGPEFRSIKPEASSPSERLPIESVPSTSEEPVGDRA-TGSKKRSKNKRKA 361

Query: 361 RKKLCMENRVATETSQTAAPCSVAQ 385
           RKKLCMEN+VAT TSQT APCS+AQ
Sbjct: 362 RKKLCMENQVATGTSQT-APCSIAQ 384

[Close]

BLAST of Cmc06g0163931 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-22
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 70  SDPTQIFVYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNR 129
           S  +  +V+K+ L EYAQK ++  PVY+ + EG      F+STV+LD V Y S   F NR
Sbjct: 8   SGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNR 67

Query: 130 RAAEQDAARIAFEYISKKTK-DDAFLLLREDLILCKSILSEYTDKMGLERPIYTTKHHK- 189
           +AAEQ AA +A   ++K ++          +  LCK++L EY  KM    P+Y  +  + 
Sbjct: 68  KAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVET 127

Query: 190 -GSVPLFQSTLVFDGVVYTSDLSRTKKEAEQLAARAAILSL 228
            G V  F  T+   G+ YT   +RTKK+AE  A R A+L++
Sbjct: 128 LGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAI 168

[Close]

BLAST of Cmc06g0163931 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-15
Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++   +P Y  I EG    P+F++TV  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A +A   +S +    +    + ++  + K++L E   ++G   P YTT +   G  P+F 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSL 228
            T+   G+ +T D ++ KK+AE+ AA AA  SL
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSL 153

[Close]

BLAST of Cmc06g0163931 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 79.7 bits (195), Expect = 5.6e-15
Identity = 61/249 (24.50%), Postives = 111/249 (44.58%), Query Frame = 0


Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++  ++P Y    EG    P+F+++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A +A   +S K    +    + ++  + K++L E   + GL+ P+YT+ +   G +P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLADIIASKVRFHAMLQ 256
            T+   G+ +  + ++TKK+AE+ AA AA  SL     +             +R     Q
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPRL-----------DPLRGEEKEQ 180

Query: 257 KVKDSHFSQIQPKSI----PENTVERVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLF 316
           ++     S+ +PK +    P  +  R  +            +   ++C  +      +L+
Sbjct: 181 EIVARVLSRFRPKEVKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEKLRS---INLY 235

Query: 317 RPEFSSTKP 320
             E SS+ P
Sbjct: 241 TNEASSSSP 235

[Close]

BLAST of Cmc06g0163931 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 79.7 bits (195), Expect = 5.6e-15
Identity = 61/249 (24.50%), Postives = 111/249 (44.58%), Query Frame = 0


Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++  ++P Y    EG    P+F+++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A +A   +S K    +    + ++  + K++L E   + GL+ P+YT+ +   G +P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQKTLADIIASKVRFHAMLQ 256
            T+   G+ +  + ++TKK+AE+ AA AA  SL     +             +R     Q
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPRL-----------DPLRGEEKEQ 180

Query: 257 KVKDSHFSQIQPKSI----PENTVERVAMTVNEDKNVKDAVSDSGVVCGAISEACPTSLF 316
           ++     S+ +PK +    P  +  R  +            +   ++C  +      +L+
Sbjct: 181 EIVARVLSRFRPKEVKRREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEKLRS---INLY 235

Query: 317 RPEFSSTKP 320
             E SS+ P
Sbjct: 241 TNEASSSSP 235

[Close]

BLAST of Cmc06g0163931 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-14
Identity = 49/162 (30.25%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 77  VYKNHLHEYAQKARIAVPVYQTIDEGSPGLPKFRSTVLLDEVHYVSPNTFRNRRAAEQDA 136
           +YKN L E AQ++   +P Y  I EG    P+F+++V  +   + SP      R AE  A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 137 ARIAFEYISKKTKDDAFLL-LREDLILCKSILSEYTDKMGLERPIYTT-KHHKGSVPLFQ 196
           A ++   +S +    +    + ++  + K++L E   + GL+ P+YT+ +      P F 
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 197 STLVFDGVVYTSDLSRTKKEAEQLAARAAILSLHDAINIKSQ 237
            T+   G+ +T + ++TKK+AE+ AA AA  SL    ++ SQ
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMSSLDSQ 162

The following BLAST results are available for this feature:

BLAST of Cmc06g0163931 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457067.1	6.2e-210	99.48	PREDICTED: uncharacterized protein LOC103496837 isoform X2 [Cucumis melo]	[more]
XP_008457066.1	1.5e-208	99.22	PREDICTED: uncharacterized protein LOC103496837 isoform X1 [Cucumis melo]	[more]
XP_011651405.1	3.5e-184	87.76	double-stranded RNA-binding protein 4 isoform X2 [Cucumis sativus]	[more]
XP_004149792.1	8.5e-183	87.53	uncharacterized protein LOC101213863 isoform X1 [Cucumis sativus] >KAE8650625.1 ...	[more]
XP_008457068.1	7.2e-174	86.20	PREDICTED: double-stranded RNA-binding protein 4-like isoform X3 [Cucumis melo]	[more]

BLAST of Cmc06g0163931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YW64	1.9e-23	38.14	Double-stranded RNA-binding protein 4 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DJA3	4.6e-22	39.18	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
O04492	3.0e-21	37.89	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
Q0IV63	3.0e-21	38.25	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IQN6	8.7e-21	37.70	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Cmc06g0163931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C4R2	3.0e-210	99.48	uncharacterized protein LOC103496837 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C485	7.4e-209	99.22	uncharacterized protein LOC103496837 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C4M5	3.5e-174	86.20	double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V1Q3	6.2e-171	87.77	Double-stranded RNA-binding protein 4-like isoform X3 OS=Cucumis melo var. makuw...	[more]
A0A6J1F5U3	1.2e-145	73.51	double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of Cmc06g0163931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09700.1	2.1e-22	37.89	dsRNA-binding domain-like superfamily protein	[more]
AT2G28380.1	1.9e-15	32.68	dsRNA-binding protein 2	[more]
AT3G26932.1	5.6e-15	24.50	dsRNA-binding protein 3	[more]
AT3G26932.2	5.6e-15	24.50	dsRNA-binding protein 3	[more]
AT5G41070.1	1.6e-14	30.25	dsRNA-binding protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 163..228 e-value: 1.4E-7 score: 41.2 coord: 78..145 e-value: 2.0E-10 score: 50.6
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 164..227 e-value: 4.6E-11 score: 43.3 coord: 78..143 e-value: 2.2E-9 score: 37.9
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 77..146 score: 11.941103
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 193..229 score: 8.566698
None	No IPR available	GENE3D	3.30.160.20		coord: 66..150 e-value: 9.0E-18 score: 65.7 coord: 154..231 e-value: 5.2E-18 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..367
None	No IPR available	PANTHER	PTHR11207:SF26	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	coord: 63..360
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 161..227
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 78..150
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 63..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0163931.1	Cmc06g0163931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding