Cmc06g0163641 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0163641
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase domain-containing protein
Location	CMiso1.1chr06: 13514313 .. 13514741 (+)
RNA-Seq Expression	Cmc06g0163641
Synteny	Cmc06g0163641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTGGCCTTGGAAATCTCCCTGTTCGCTATCTTGGGCTTCCTTTACTTACTGGTAGGTTACGTTCTAATGATTGTGCTCCTCTTATTCAGCGTATCACTAGTTGGATTCGTTCTTGGACTGCTCGAGTTCTATCTTTTTTTGGTACATTGCAGCTTGTTCGTTCTGTGCTCCACAGCCTTCAAGTTTACTGGGCTAGTATGTTTGTTCTTCCTGCGTATGTGCATAATGAGGTGGATAAGATACTGAGGTCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGAGGGGGTTTTAAGGTGGCATGGGTGGAAGTGTGTCTCCCCTTTGAGGAGGGTGAACTTGCAATTCAAGATGGGCCTTCTTGGAATATTGCGAGTACTTTGAAGATTCTGTGGTTGCTGTTGACGAGTTCGAGTTCTCTTTAG

mRNA sequence

ATGGGTTTTGGCCTTGGAAATCTCCCTGTTCGCTATCTTGGGCTTCCTTTACTTACTGGTAGGTTACGTTCTAATGATTGTGCTCCTCTTATTCAGCGTATCACTAGTTGGATTCGTTCTTGGACTGCTCGAGTTCTATCTTTTTTTGGTACATTGCAGCTTGTTCGTTCTGTGCTCCACAGCCTTCAAGTTTACTGGGCTAGTATGTTTGTTCTTCCTGCGTATGTGCATAATGAGGTGGATAAGATACTGAGGTCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGAGGGGGTTTTAAGGTGGCATGGGTGGAAGTGTGTCTCCCCTTTGAGGAGGGTGAACTTGCAATTCAAGATGGGCCTTCTTGGAATATTGCGAGTACTTTGAAGATTCTGTGGTTGCTGTTGACGAGTTCGAGTTCTCTTTAG

Coding sequence (CDS)

ATGGGTTTTGGCCTTGGAAATCTCCCTGTTCGCTATCTTGGGCTTCCTTTACTTACTGGTAGGTTACGTTCTAATGATTGTGCTCCTCTTATTCAGCGTATCACTAGTTGGATTCGTTCTTGGACTGCTCGAGTTCTATCTTTTTTTGGTACATTGCAGCTTGTTCGTTCTGTGCTCCACAGCCTTCAAGTTTACTGGGCTAGTATGTTTGTTCTTCCTGCGTATGTGCATAATGAGGTGGATAAGATACTGAGGTCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGAGGGGGTTTTAAGGTGGCATGGGTGGAAGTGTGTCTCCCCTTTGAGGAGGGTGAACTTGCAATTCAAGATGGGCCTTCTTGGAATATTGCGAGTACTTTGAAGATTCTGTGGTTGCTGTTGACGAGTTCGAGTTCTCTTTAG

Protein sequence

MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLHSLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDGPSWNIASTLKILWLLLTSSSSL

Homology

[Close]

BLAST of Cmc06g0163641 vs. NCBI nr
Match: XP_016902060.1 (PREDICTED: uncharacterized protein LOC103496880 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
           MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH
Sbjct: 323 MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 382

Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG
Sbjct: 383 SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 442

Query: 121 PSWNIA 127
           PSWNIA
Sbjct: 443 PSWNIA 448

[Close]

BLAST of Cmc06g0163641 vs. NCBI nr
Match: KAA0060725.1 (uncharacterized protein E6C27_scaffold72G00120 [Cucumis melo var. makuwa] >TYK01467.1 uncharacterized protein E5676_scaffold451G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
           MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH
Sbjct: 327 MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 386

Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG
Sbjct: 387 SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 446

Query: 121 PSWNIA 127
           PSWNIA
Sbjct: 447 PSWNIA 452

[Close]

BLAST of Cmc06g0163641 vs. NCBI nr
Match: KAA0065355.1 (F17F8.5 [Cucumis melo var. makuwa] >TYK20852.1 F17F8.5 [Cucumis melo var. makuwa])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 127/142 (89.44%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
           MGF  GNLPVRYLGLPLL GRLRSNDCAPLIQR+TS IRSWTA+VLSF G LQLVRSVL 
Sbjct: 661 MGFVFGNLPVRYLGLPLLIGRLRSNDCAPLIQRMTSRIRSWTAQVLSFVGRLQLVRSVLR 720

Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           SLQVYW S+FVLPAYVHNEVDKILRSYLWRGKEEGRGG KVAWVEVCLPFEEG LAI+DG
Sbjct: 721 SLQVYWPSVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVEVCLPFEEGGLAIRDG 780

Query: 121 PSWNIASTLKILWLLLTSSSSL 143
           PSWNIASTLKILWLLLTSS SL
Sbjct: 781 PSWNIASTLKILWLLLTSSGSL 802

[Close]

BLAST of Cmc06g0163641 vs. NCBI nr
Match: TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 7.7e-65
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1    MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
            MGF  GNLPVRYLGLPLLTGRLRSNDCAPLIQRITS IRSW ARVLSF G LQLVRSVL 
Sbjct: 1014 MGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARVLSFAGRLQLVRSVLR 1073

Query: 61   SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
            SLQVYWAS+FVLPAYVHNEVDKILRSYLWRGKEEGRGG KVAWV+VCLPFEEG   I+DG
Sbjct: 1074 SLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGFGIRDG 1133

Query: 121  PSWNIASTLKILWLLLTSSSSL 143
            PSWNIASTLKILWL+LT+S SL
Sbjct: 1134 PSWNIASTLKILWLMLTNSGSL 1155

[Close]

BLAST of Cmc06g0163641 vs. NCBI nr
Match: KAA0026071.1 (uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 7.7e-65
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1    MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
            MGF  GNLPVRYLGLPLLTGRLRSNDCAPLIQRITS IRSW ARVLSF G LQLVRSVL 
Sbjct: 1014 MGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARVLSFAGRLQLVRSVLR 1073

Query: 61   SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
            SLQVYWAS+FVLPAYVHNEVDKILRSYLWRGKEEGRGG KVAWV+VCLPFEEG   I+DG
Sbjct: 1074 SLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGFGIRDG 1133

Query: 121  PSWNIASTLKILWLLLTSSSSL 143
            PSWNIASTLKILWL+LT+S SL
Sbjct: 1134 PSWNIASTLKILWLMLTNSGSL 1155

[Close]

BLAST of Cmc06g0163641 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-15
Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 15  LPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLHSLQVYWASMFVLPA 74
           +P+L  R+  +    +++R++S +  W  + LSF G L L ++VL S+ V+  S  +LP 
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 75  YVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDGPSWNIASTLKILWL 134
            + N +D++ R++LW    E +    V W +VC P +EG L ++   S N A   K+ W 
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 135 LLTSSSSL 143
           LL   +SL
Sbjct: 121 LLQEKNSL 128

[Close]

BLAST of Cmc06g0163641 vs. ExPASy TrEMBL
Match: A0A5A7V4C1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00110 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
           MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH
Sbjct: 327 MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 386

Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG
Sbjct: 387 SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 446

Query: 121 PSWNIA 127
           PSWNIA
Sbjct: 447 PSWNIA 452

[Close]

BLAST of Cmc06g0163641 vs. ExPASy TrEMBL
Match: A0A1S4E258 (uncharacterized protein LOC103496880 OS=Cucumis melo OX=3656 GN=LOC103496880 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
           MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH
Sbjct: 323 MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 382

Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG
Sbjct: 383 SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 442

Query: 121 PSWNIA 127
           PSWNIA
Sbjct: 443 PSWNIA 448

[Close]

BLAST of Cmc06g0163641 vs. ExPASy TrEMBL
Match: A0A5A7VHU9 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00030 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 127/142 (89.44%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
           MGF  GNLPVRYLGLPLL GRLRSNDCAPLIQR+TS IRSWTA+VLSF G LQLVRSVL 
Sbjct: 661 MGFVFGNLPVRYLGLPLLIGRLRSNDCAPLIQRMTSRIRSWTAQVLSFVGRLQLVRSVLR 720

Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           SLQVYW S+FVLPAYVHNEVDKILRSYLWRGKEEGRGG KVAWVEVCLPFEEG LAI+DG
Sbjct: 721 SLQVYWPSVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVEVCLPFEEGGLAIRDG 780

Query: 121 PSWNIASTLKILWLLLTSSSSL 143
           PSWNIASTLKILWLLLTSS SL
Sbjct: 781 PSWNIASTLKILWLLLTSSGSL 802

[Close]

BLAST of Cmc06g0163641 vs. ExPASy TrEMBL
Match: A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1    MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
            MGF  GNLPVRYLGLPLLTGRLRSNDCAPLIQRITS IRSW ARVLSF G LQLVRSVL 
Sbjct: 1014 MGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARVLSFAGRLQLVRSVLR 1073

Query: 61   SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
            SLQVYWAS+FVLPAYVHNEVDKILRSYLWRGKEEGRGG KVAWV+VCLPFEEG   I+DG
Sbjct: 1074 SLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGFGIRDG 1133

Query: 121  PSWNIASTLKILWLLLTSSSSL 143
            PSWNIASTLKILWL+LT+S SL
Sbjct: 1134 PSWNIASTLKILWLMLTNSGSL 1155

[Close]

BLAST of Cmc06g0163641 vs. ExPASy TrEMBL
Match: A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0


Query: 1    MGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLH 60
            MGF  GNLPVRYLGLPLLTGRLRSNDCAPLIQRITS IRSW ARVLSF G LQLVRSVL 
Sbjct: 1014 MGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARVLSFAGRLQLVRSVLR 1073

Query: 61   SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
            SLQVYWAS+FVLPAYVHNEVDKILRSYLWRGKEEGRGG KVAWV+VCLPFEEG   I+DG
Sbjct: 1074 SLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGFGIRDG 1133

Query: 121  PSWNIASTLKILWLLLTSSSSL 143
            PSWNIASTLKILWL+LT+S SL
Sbjct: 1134 PSWNIASTLKILWLMLTNSGSL 1155

[Close]

BLAST of Cmc06g0163641 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 120.9 bits (302), Expect = 8.1e-28
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 3   FGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTARVLSFFGTLQLVRSVLHSL 62
           F  G LPVRYLGLPLLT ++ ++D  PL+++I   I  WTAR LSF G LQL+ SV+HSL
Sbjct: 18  FASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSL 77

Query: 63  QVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQD--- 122
             +W S F LP+    E+D I  S+LW G E      KVAW +VC P +EG L I+    
Sbjct: 78  TNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKE 137

Query: 123 ---GPSWNIA 127
              G  W+I+
Sbjct: 138 ANKGSFWSIS 147

[Close]

BLAST of Cmc06g0163641 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-05
Identity = 24/82 (29.27%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 61  SLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAWVEVCLPFEEGELAIQDG 120
           +L  Y  + F+LP  V  ++  +L  + WR K+E +G    AW  +     EG +  +D 
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 121 PSWNIASTLKILWLLLTSSSSL 143
            ++N+A   K +W +L+   SL
Sbjct: 62  EAFNLALLGKQMWRMLSRPESL 83

The following BLAST results are available for this feature:

BLAST of Cmc06g0163641 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902060.1	9.8e-68	100.00	PREDICTED: uncharacterized protein LOC103496880 [Cucumis melo]	[more]
KAA0060725.1	9.8e-68	100.00	uncharacterized protein E6C27_scaffold72G00120 [Cucumis melo var. makuwa] >TYK01...	[more]
KAA0065355.1	4.5e-65	89.44	F17F8.5 [Cucumis melo var. makuwa] >TYK20852.1 F17F8.5 [Cucumis melo var. makuwa...	[more]
TYK28099.1	7.7e-65	88.03	uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]	[more]
KAA0026071.1	7.7e-65	88.03	uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0163641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.5e-15	32.81	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Cmc06g0163641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4C1	4.7e-68	100.00	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4E258	4.7e-68	100.00	uncharacterized protein LOC103496880 OS=Cucumis melo OX=3656 GN=LOC103496880 PE=...	[more]
A0A5A7VHU9	2.2e-65	89.44	F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00030 PE=4 S...	[more]
A0A5A7SPE5	3.8e-65	88.03	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DXE4	3.8e-65	88.03	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Cmc06g0163641 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	8.1e-28	47.69	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G29090.1	1.1e-05	29.27	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0163641.1	Cmc06g0163641.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003964	RNA-directed DNA polymerase activity