Cmc06g0163431 (gene) Melon (Charmono) v1.1

Overview
NameCmc06g0163431
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr06: 13098585 .. 13100839 (+)
RNA-Seq ExpressionCmc06g0163431
SyntenyCmc06g0163431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGCGTGGACATGCATCTAGCGCCTACCTGGGAGGGCTTTACAATACACAGATGAAAAGCAATTTTCAAATAAAAATAGAAATTTTCAAACTACTCCCTATAATCAAGCTCGTCCATGGACGATTATGCAAACAGTATAAAAAGAAGAGTTACTCAAAGCTTTCTCTCTCTCTCATTTCAGAACATGTGCACCTTGACTAATATAGAGAGATAAATGTCCAACTCTACCCACCATTCCATATTTCGATTATCAAAAAGGTTGTAAGAGTTGACATCTCATCTAGATTGGTGCCATGAAATTGAACCCATCGTCCTTCTCCTTCAGTTCTTTTTTAATTTTTAAGAAGTTCCAAGCTCCTTTATGCATAGACAACCCTTTATCTACAATGTGGATTCTCTTGCAAACTGAAGAAGTTAGCACTCAACAACAAATCTTTCATCACCTCTTTTGACGATCCTTTAAGGATTTATCGTATTCACCGACTAAAGAAGTATAATACGCGTAATCTATTATGAGTCCTTTCTCATTTCTGAGTTTAAGCAAATCTTCTGCTTTTCCATTTTTACAGTGCCCTTCCAAAAGAATGTTGTATGTAATGTCATCTGGAGTTACTCCTAAATTAAGCATTGCTTCCAATAGCATATGTGCATTCTTCATCTGTCCTTGCTTGCAAAGTCCATTCATAAGCACATTATAAGTTATGACACCAGGCTTATGGCCGTTGATTTGCATCTCTTTCAGCATCTTAAACCCCGTCTTTACATCGCCTTTCTTGCAATACCCATCAATTACCATAGTATATGTGGCATCATCGGGTTTCATACCGGCTTCCATCATCTCCCTCAAGGTCCTCTCTGCATCCCTCACCCTTCCATCTCTACAGAAACCTGAAATAAGGGCTGTGAATGCTACATTATCCAGCACAACCCCTTCTTCATTCATCCCTTTCCTAATCTCCAAGGCTGATTCTAAATCTCCCTCTTTGCAATAACCATCTATGAGTGTGGTGTAAGAGATCTTATCAGGTTTCATCCCCACCATTCTCATTTCATCAATTAGCTTCCTAGCTTTATTAACATCCCCAACCTTGCAAAGGCCATATAAGAGTGTATTGTACATAACCAAATCTGGTTTCACTCCCATGGTTAACATTTGGTGGTAAGTGTTCATAGCTGAGTCAATTTGTCTCCTCTTACATTGCCCGTCAATCAATGCGGTGAACGTAACGCCGTTTGGTCTCAATCCTCTCTTCTGCATTTCATCAAACAGTTGTTCTGCATTATCTAACCTACCTTCCTTACATAATCTATGAATCAGAACGCTGTAAGTGAAAACATCAGGATATATTCTATTCTCTTCCATGATCTTCTTCAACCTAAACCCCTCATCTAAATTTCTAGATTTACAGAGCCCATTAATCAAGGTATTGAAACTAACAGTTGTAGGACGCAAACCCCACTTCCTAATTTCATCAAAAATCAACTTGGCATCTCTAGTACTTCCCTCTTTACAGAACTTATTGATCAAAATATTGAAATACTTCACATTAGGCGGGAACCCAGAATCCAAAATTTCTGAATAAAACGTCCAAATTGTAACAGGGGAGTTCGAATTCATCATTTTATCAAGCAAGTACCCACAACCATGAAACGGGATTTGAAAATTGCTCTTCCTAACCAACCTAAAACACTGAATAGCATCGGAAACGAATCCGGAATCCCAATATGCAATCATCAAAGCATCAAAAACAAAATTCGAACAACGCGTACCTGCAATGTCAAGAATCGCTGCAAAGACGGAAGCCGCCGAGTCCTTGCCTTTGCGGGAGACAAGAAATCGTATAATCGATTGACATTCTTCGAACATTTGATGGGCAGAGAGGAAATTGGCCATAGCGCAGTAGGATTGAGAAGTGTGGCGAAAGGTGGGCATAGAAGAGAGCCAATTGAAGAATGAGAAGAGAGAGAGAGGGGAAAGAGAGAAAGGATTATGGTTGATGAGGTCGATAAAATGGTGGGGTTTGAAGGAAGGGAGGAGGCGGCGGAGAGAAGAGGCGAGAGGCTTTGTTTGGGCGTTGTTGATGGCTGTGGAGACGGCGGCGAGTAAAGGGTCAGCCACCGCTGCCGGCGGTGGTGGAGAATGCCATGTGGAGTAGCGGAAGGAAGGTTTGGAGAGGGAAATGGAGAGTTTGAAGGAAGAATTGTTGGCCATGGATGTGATTCGATGAGAGCTGTGATTGGAATATTAATTTC

mRNA sequence

TTAGGCGTGGACATGCATCTAGCGCCTACCTGGGAGGGCTTTACAATACACAGATGAAAAGCAATTTTCAAATAAAAATAGAAATTTTCAAACTACTCCCTATAATCAAGCTCGTCCATGGACGATTATGCAAACAGTATAAAAAGAAGAGTTACTCAAAGCTTTCTCTCTCTCTCATTTCAGAACATGTGCACCTTGACTAATATAGAGAGATAAATGTCCAACTCTACCCACCATTCCATATTTCGATTATCAAAAAGGTTGTAAGAGTTGACATCTCATCTAGATTGGTGCCATGAAATTGAACCCATCGTCCTTCTCCTTCAGTTCTTTTTTAATTTTTAAGAAGTTCCAAGCTCCTTTATGCATAGACAACCCTTTATCTACAATGTGGATTCTCTTGCAAACTGAAGAAGTTAGCACTCAACAACAAATCTTTCATCACCTCTTTTGACGATCCTTTAAGGATTTATCGTATTCACCGACTAAAGAAGTATAATACGCGTAATCTATTATGAGTCCTTTCTCATTTCTGAGTTTAAGCAAATCTTCTGCTTTTCCATTTTTACAGTGCCCTTCCAAAAGAATGTTGTATGTAATGTCATCTGGAGTTACTCCTAAATTAAGCATTGCTTCCAATAGCATATGTGCATTCTTCATCTGTCCTTGCTTGCAAAGTCCATTCATAAGCACATTATAAGTTATGACACCAGGCTTATGGCCGTTGATTTGCATCTCTTTCAGCATCTTAAACCCCGTCTTTACATCGCCTTTCTTGCAATACCCATCAATTACCATAGTATATGTGGCATCATCGGGTTTCATACCGGCTTCCATCATCTCCCTCAAGGTCCTCTCTGCATCCCTCACCCTTCCATCTCTACAGAAACCTGAAATAAGGGCTGTGAATGCTACATTATCCAGCACAACCCCTTCTTCATTCATCCCTTTCCTAATCTCCAAGGCTGATTCTAAATCTCCCTCTTTGCAATAACCATCTATGAGTGTGGTGTAAGAGATCTTATCAGGTTTCATCCCCACCATTCTCATTTCATCAATTAGCTTCCTAGCTTTATTAACATCCCCAACCTTGCAAAGGCCATATAAGAGTGTATTGTACATAACCAAATCTGGTTTCACTCCCATGGTTAACATTTGGTGGTAAGTGTTCATAGCTGAGTCAATTTGTCTCCTCTTACATTGCCCGTCAATCAATGCGGTGAACGTAACGCCGTTTGGTCTCAATCCTCTCTTCTGCATTTCATCAAACAGTTGTTCTGCATTATCTAACCTACCTTCCTTACATAATCTATGAATCAGAACGCTGTAAGTGAAAACATCAGGATATATTCTATTCTCTTCCATGATCTTCTTCAACCTAAACCCCTCATCTAAATTTCTAGATTTACAGAGCCCATTAATCAAGGTATTGAAACTAACAGTTGTAGGACGCAAACCCCACTTCCTAATTTCATCAAAAATCAACTTGGCATCTCTAGTACTTCCCTCTTTACAGAACTTATTGATCAAAATATTGAAATACTTCACATTAGGCGGGAACCCAGAATCCAAAATTTCTGAATAAAACGTCCAAATTGTAACAGGGGAGTTCGAATTCATCATTTTATCAAGCAAGTACCCACAACCATGAAACGGGATTTGAAAATTGCTCTTCCTAACCAACCTAAAACACTGAATAGCATCGGAAACGAATCCGGAATCCCAATATGCAATCATCAAAGCATCAAAAACAAAATTCGAACAACGCGTACCTGCAATGTCAAGAATCGCTGCAAAGACGGAAGCCGCCGAGTCCTTGCCTTTGCGGGAGACAAGAAATCGTATAATCGATTGACATTCTTCGAACATTTGATGGGCAGAGAGGAAATTGGCCATAGCGCAGTAGGATTGAGAAGTGTGGCGAAAGGTGGGCATAGAAGAGAGCCAATTGAAGAATGAGAAGAGAGAGAGAGGGGAAAGAGAGAAAGGATTATGGTTGATGAGGTCGATAAAATGGTGGGGTTTGAAGGAAGGGAGGAGGCGGCGGAGAGAAGAGGCGAGAGGCTTTGTTTGGGCGTTGTTGATGGCTGTGGAGACGGCGGCGAGTAAAGGGTCAGCCACCGCTGCCGGCGGTGGTGGAGAATGCCATGTGGAGTAGCGGAAGGAAGGTTTGGAGAGGGAAATGGAGAGTTTGAAGGAAGAATTGTTGGCCATGGATGTGATTCGATGAGAGCTGTGATTGGAATATTAATTTC

Coding sequence (CDS)

ATGAAACGGGATTTGAAAATTGCTCTTCCTAACCAACCTAAAACACTGAATAGCATCGGAAACGAATCCGGAATCCCAATATGCAATCATCAAAGCATCAAAAACAAAATTCGAACAACGCGTACCTGCAATGTCAAGAATCGCTGCAAAGACGGAAGCCGCCGAGTCCTTGCCTTTGCGGGAGACAAGAAATCGTATAATCGATTGACATTCTTCGAACATTTGATGGGCAGAGAGGAAATTGGCCATAGCGCAGTAGGATTGAGAAGTGTGGCGAAAGGTGGGCATAGAAGAGAGCCAATTGAAGAATGA

Protein sequence

MKRDLKIALPNQPKTLNSIGNESGIPICNHQSIKNKIRTTRTCNVKNRCKDGSRRVLAFAGDKKSYNRLTFFEHLMGREEIGHSAVGLRSVAKGGHRREPIEE
Homology
[Close]
BLAST of Cmc06g0163431 vs. NCBI nr
Match: PON89093.1 (hypothetical protein TorRG33x02_151680 [Trema orientale])

HSP 1 Score: 78.2 bits (191), Expect = 4.7e-11
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 0 

Query: 1   MKRDLKIALPNQPKTLNSIGNESGIPICNHQSIKNKIRTTRTCNVKNRCKDGSRRVLAFA 60
           M  D  I L NQ K LN IG ++ I + ++Q IK+ IR   T    N  +DG  RVL FA
Sbjct: 1   MTWDTIIMLRNQSKALNCIGKKARIGVSHNQRIKHSIRLIGTSGFDNGGEDGGGRVLPFA 60

Query: 61  GDKKSYNRLTFFEHLMGREEIGHSAVGLRSVAKGGHRREPIEE 104
            D++    L  +    G EE+GH AVG+  VA+GG R EP+EE
Sbjct: 61  RDEEPEEGLGMWVQTTGAEEVGHGAVGVEGVAEGGLRGEPVEE 103

[Close]
BLAST of Cmc06g0163431 vs. NCBI nr
Match: PON33501.1 (LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_352260 [Parasponia andersonii])

HSP 1 Score: 71.2 bits (173), Expect = 5.7e-09
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0 

Query: 1   MKRDLKIALPNQPKTLNSIGNESGIPICNHQSIKNKIRTTRTCNVKNRCKDGSRRVLAFA 60
           MK D KI L NQ K LN I  ++ I + ++Q IK  IR   T    N  +DG  RVL FA
Sbjct: 1   MKWDTKIMLRNQSKALNCIRKKARIGVSHNQKIKRSIRLIGTSGFDNGGEDGGGRVLPFA 60

Query: 61  GDKKSYNRLTFFEHLMGREEIGHSAVGLRSVAKGGHRREPIEE 104
              +    L      +G EE+GH AVG+  VA+GG  R P+EE
Sbjct: 61  RGDEPEEGLGMLVQTIGAEEVGHGAVGVEGVAEGG-LRGPVEE 102

[Close]
BLAST of Cmc06g0163431 vs. ExPASy TrEMBL
Match: A0A2P5EU73 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_151680 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-11
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 0 

Query: 1   MKRDLKIALPNQPKTLNSIGNESGIPICNHQSIKNKIRTTRTCNVKNRCKDGSRRVLAFA 60
           M  D  I L NQ K LN IG ++ I + ++Q IK+ IR   T    N  +DG  RVL FA
Sbjct: 1   MTWDTIIMLRNQSKALNCIGKKARIGVSHNQRIKHSIRLIGTSGFDNGGEDGGGRVLPFA 60

Query: 61  GDKKSYNRLTFFEHLMGREEIGHSAVGLRSVAKGGHRREPIEE 104
            D++    L  +    G EE+GH AVG+  VA+GG R EP+EE
Sbjct: 61  RDEEPEEGLGMWVQTTGAEEVGHGAVGVEGVAEGGLRGEPVEE 103

[Close]
BLAST of Cmc06g0163431 vs. ExPASy TrEMBL
Match: A0A2P5AAE0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_352260 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.8e-09
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0 

Query: 1   MKRDLKIALPNQPKTLNSIGNESGIPICNHQSIKNKIRTTRTCNVKNRCKDGSRRVLAFA 60
           MK D KI L NQ K LN I  ++ I + ++Q IK  IR   T    N  +DG  RVL FA
Sbjct: 1   MKWDTKIMLRNQSKALNCIRKKARIGVSHNQKIKRSIRLIGTSGFDNGGEDGGGRVLPFA 60

Query: 61  GDKKSYNRLTFFEHLMGREEIGHSAVGLRSVAKGGHRREPIEE 104
              +    L      +G EE+GH AVG+  VA+GG  R P+EE
Sbjct: 61  RGDEPEEGLGMLVQTIGAEEVGHGAVGVEGVAEGG-LRGPVEE 102

The following BLAST results are available for this feature:
BLAST of Cmc06g0163431 vs. NCBI nr
Match NameE-valueIdentityDescription
PON89093.14.7e-1143.69hypothetical protein TorRG33x02_151680 [Trema orientale][more]
PON33501.15.7e-0942.72LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_352260 [Parasponia anderson... [more]
BLAST of Cmc06g0163431 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc06g0163431 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5EU732.3e-1143.69Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_151680 PE=4 SV... [more]
A0A2P5AAE02.8e-0942.72Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_352260 PE... [more]
BLAST of Cmc06g0163431 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc06g0163431.1Cmc06g0163431.1mRNA