Cmc06g0163251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0163251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 12478766 .. 12479839 (+)
RNA-Seq Expression	Cmc06g0163251
Synteny	Cmc06g0163251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGCAAAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCTTGCAAAGGTCAAGCAAGGCCCAGAGACAGAATTTGAGTTGAGAACGGATGGAGCCATAGTTAAGCAGGGAAGACTATGTGTTCCGAATATTAGTGAGCTTAAGGGTGCTATACTAGAAGAAGCTCATAATTCAGCTTACGCTATGCATCTAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGGTGGCCTGATATGAAGCGAGAGATAGCTGAATATATCGATAGATGTTTGATCTATCAACAGGTTAAACCAGTGAAGCAGAGGACAGGAGGACTCCTTAATCCCCTGCTAGTGCCAGAGTGGAAGTGAGAGCATATTACCATGGATTTTCTATTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAGGACAGCGCGGTTTATACTGATTAAAGTGACGTCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAAGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAAAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAGCGTTCCATCCCAAGACAGATGGTCAGTCAAAGAGGACCATCCAGACCTTAGAAGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCACTTATAATAACAGCTACCAGTCTAGTATCGATATGGCACCATGTGAGGCTTTGTATGGCAGACCATGTAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTTGGTCCTGAGTTAGTACAAGATACGTCAGACAATATTAAGCTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGAGCTATACAGATAAGCGACGAAGAGACTTAGAGTTCCAGATTGGAGAATAA

mRNA sequence

ATGACTGCAAAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCTTGCAAAGGTCAAGCAAGGCCCAGAGACAGAATTTGAGTTGAGAACGGATGGAGCCATAGTTAAGCAGGGAAGACTATGTGTTCCGAATATTAGTGAGCTTAAGGGTGCTATACTAGAAGAAGCTCATAATTCAGCTTACGCTATGCATCTAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGGTGGCCTGATATGAAGCGAGAGATAGCTGAATATATCGATAGATGTTTGATCTATCAACAGGTTAAACCAGTGAAGCAGAGGACAGGAGGACTCCTTAATCCCCTGCTAGTGCCAGAGTGGAAAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAGGACAGCGCGGTTTATACTGATTAAAGTGACGTCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAAGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAAAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAGCGTTCCATCCCAAGACAGATGGTCAGTCAAAGAGGACCATCCAGACCTTAGAAGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCACTTATAATAACAGCTACCAGTCTAGTATCGATATGGCACCATGTGAGGCTTTGTATGGCAGACCATGTAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTTGGTCCTGAGTTAGTACAAGATACGTCAGACAATATTAAGCTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGAGCTATACAGATAAGCGACGAAGAGACTTAGAGTTCCAGATTGGAGAATAA

Coding sequence (CDS)

ATGACTGCAAAAAGCTCAGGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCTTGCAAAGGTCAAGCAAGGCCCAGAGACAGAATTTGAGTTGAGAACGGATGGAGCCATAGTTAAGCAGGGAAGACTATGTGTTCCGAATATTAGTGAGCTTAAGGGTGCTATACTAGAAGAAGCTCATAATTCAGCTTACGCTATGCATCTAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGGTGGCCTGATATGAAGCGAGAGATAGCTGAATATATCGATAGATGTTTGATCTATCAACAGGTTAAACCAGTGAAGCAGAGGACAGGAGGACTCCTTAATCCCCTGCTAGTGCCAGAGTGGAAAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAGGACAGCGCGGTTTATACTGATTAAAGTGACGTCTACACTAGATCAGCTAGCTAAGTTATACGTCGACAAGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAAAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAGCGTTCCATCCCAAGACAGATGGTCAGTCAAAGAGGACCATCCAGACCTTAGAAGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCACTTATAATAACAGCTACCAGTCTAGTATCGATATGGCACCATGTGAGGCTTTGTATGGCAGACCATGTAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAACGAAAGCTAGTTGGTCCTGAGTTAGTACAAGATACGTCAGACAATATTAAGCTGATTAGGGAAAATCTAAAAATAGCTCAGGATCGACAGAAGAGCTATACAGATAAGCGACGAAGAGACTTAGAGTTCCAGATTGGAGAATAA

Protein sequence

MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQGRLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQQVKPVKQRTGGLLNPLLVPEWKGYDGIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE

Homology

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BLAST of Cmc06g0163251 vs. NCBI nr
Match: TYK11723.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 584.3 bits (1505), Expect = 6.6e-163
Identity = 297/357 (83.19%), Postives = 312/357 (87.39%), Query Frame = 0


Query: 1   MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
           MTA+SSGSLLAQFQVRSSLVAE VGRQ EDSNLQKMLAK KQGPE EFELRT+ AIVKQG
Sbjct: 1   MTAESSGSLLAQFQVRSSLVAETVGRQQEDSNLQKMLAKAKQGPEAEFELRTNRAIVKQG 60

Query: 61  RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
           RLCVPNIS+LKGAILEE HN AYAMH GSTKMYRTLK TYWWP MKREIAEY+DRCLI Q
Sbjct: 61  RLCVPNISKLKGAILEETHNLAYAMHPGSTKMYRTLKNTYWWPGMKREIAEYVDRCLICQ 120

Query: 121 QVKPVKQRTGGLLNPLLVPEWK-----------------GYDGIWVIVDRLTRTARFILI 180
           QVK V+Q  GGLLNPL +PEWK                 GYDGIWVIVDRLT+T RFI I
Sbjct: 121 QVKLVRQSPGGLLNPLPMPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTTRFIPI 180

Query: 181 KVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPK 240
           K TSTLDQLAKLYVD+IVSQ+GVPVSIVSDRDPRFTSKF  SVQKAMGTKLKFS+ FHP+
Sbjct: 181 KETSTLDQLAKLYVDRIVSQYGVPVSIVSDRDPRFTSKFLSSVQKAMGTKLKFSSTFHPQ 240

Query: 241 TDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCR 300
           TDGQ +RTIQTLEDMLRACVLQF GNWDTHLSLMEF YNNSYQS+I MAP EALYG+PCR
Sbjct: 241 TDGQLERTIQTLEDMLRACVLQFMGNWDTHLSLMEFAYNNSYQSNIGMAPFEALYGKPCR 300

Query: 301 TPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
           TPVCWNEVGERKLVGPELVQ TSDNIKLIRENLKIAQDRQKSY DKR+RDLEFQIGE
Sbjct: 301 TPVCWNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRQRDLEFQIGE 357

[Close]

BLAST of Cmc06g0163251 vs. NCBI nr
Match: KAA0037251.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 574.3 bits (1479), Expect = 6.9e-160
Identity = 286/300 (95.33%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG
Sbjct: 1351 MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 1410

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ
Sbjct: 1411 RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 1470

Query: 121  QVKPVKQRTGGLLNPLLVPEWKGYDGIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKI 180
            QVKPVKQRTGGLLNPLLVPEWK              TARFILIKVTSTLDQLAKLYVDKI
Sbjct: 1471 QVKPVKQRTGGLLNPLLVPEWK--------------TARFILIKVTSTLDQLAKLYVDKI 1530

Query: 181  VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 240
            VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR
Sbjct: 1531 VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 1590

Query: 241  ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 300
            ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE
Sbjct: 1591 ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 1636

[Close]

BLAST of Cmc06g0163251 vs. NCBI nr
Match: TYK07530.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 574.3 bits (1479), Expect = 6.9e-160
Identity = 286/300 (95.33%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG
Sbjct: 1118 MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 1177

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ
Sbjct: 1178 RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 1237

Query: 121  QVKPVKQRTGGLLNPLLVPEWKGYDGIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKI 180
            QVKPVKQRTGGLLNPLLVPEWK              TARFILIKVTSTLDQLAKLYVDKI
Sbjct: 1238 QVKPVKQRTGGLLNPLLVPEWK--------------TARFILIKVTSTLDQLAKLYVDKI 1297

Query: 181  VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 240
            VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR
Sbjct: 1298 VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 1357

Query: 241  ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 300
            ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE
Sbjct: 1358 ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 1403

[Close]

BLAST of Cmc06g0163251 vs. NCBI nr
Match: TYK06319.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 572.0 bits (1473), Expect = 3.4e-159
Identity = 287/357 (80.39%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            +T K SGSLLAQFQVRSSLV EIV RQ EDSNLQK   K K+G E EFELRTDGAIVKQG
Sbjct: 1262 VTTKDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQG 1321

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELK AILEEAH+SAYAMH GSTKMYRTLKKTYWW  MK+EIAEY+DRCLI Q
Sbjct: 1322 RLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQ 1381

Query: 121  QVKPVKQRTGGLLNPLLVPEWK-----------------GYDGIWVIVDRLTRTARFILI 180
            QVKPV+QR GG LNPL VPEWK                 G+DGIWVIVDRLT+T RFI I
Sbjct: 1382 QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPI 1441

Query: 181  KVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPK 240
            K+TSTLDQLA+LYVDKIVSQ+GVPVSIVSDRDPRFTSKFWPS+QKAMGT LKFST+FHP+
Sbjct: 1442 KMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQ 1501

Query: 241  TDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCR 300
            TDGQS+RTIQTLEDMLRACVLQ KG+WDTHL LMEF YNN+YQSSI MAP EALYGRPCR
Sbjct: 1502 TDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCR 1561

Query: 301  TPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
            TPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQKSY DKRRR+LEFQ+G+
Sbjct: 1562 TPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGD 1618

[Close]

BLAST of Cmc06g0163251 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 570.5 bits (1469), Expect = 9.9e-159
Identity = 286/357 (80.11%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1   MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
           +T + SGSLLAQFQVRSSLV EIV RQ EDSNLQK   K K+G E EFELRTDGAIVKQG
Sbjct: 126 VTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQG 185

Query: 61  RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
           RLCVPNISELK AILEEAH+SAYAMH GSTKMYRTLKKTYWW  MK+EIAEY+DRCLI Q
Sbjct: 186 RLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQ 245

Query: 121 QVKPVKQRTGGLLNPLLVPEWK-----------------GYDGIWVIVDRLTRTARFILI 180
           QVKPV+QR GG LNPL VPEWK                 G+DGIWVIVDRLT+T RFI I
Sbjct: 246 QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPI 305

Query: 181 KVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPK 240
           K+TSTLDQLA+LYVDKIVSQ+GVPVSIVSDRDPRFTSKFWPS+QKAMGT LKFST+FHP+
Sbjct: 306 KMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQ 365

Query: 241 TDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCR 300
           TDGQS+RTIQTLEDMLRACVLQ KG+WDTHL LMEF YNN+YQSSI MAP EALYGRPCR
Sbjct: 366 TDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCR 425

Query: 301 TPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
           TPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQKSY DKRRR+LEFQ+G+
Sbjct: 426 TPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGD 482

[Close]

BLAST of Cmc06g0163251 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 4.6e-34
Identity = 108/336 (32.14%), Postives = 159/336 (47.32%), Query Frame = 0


Query: 28   PEDSNLQKMLAKVKQGPET---EFELRTDGAIVKQGRLCVPNISELKGAILEEAH-NSAY 87
            PED +  +   K  +  ET    + L  D  I  Q RL VP   + + A++   H ++ +
Sbjct: 1079 PEDMSAFRSYQKKLELSETFRKNYSLE-DEMIYYQDRLVVP--IKQQNAVMRLYHDHTLF 1138

Query: 88   AMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQQVKPVKQRTGGLLNPLLVPEWKG 147
              H G T     +   Y+WP ++  I +YI  C+  Q +K  + R  GLL PL + E + 
Sbjct: 1139 GGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRW 1198

Query: 148  YD-----------------GIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKIVSQHGV 207
             D                  I V+VDR ++ A FI  + T    QL  L    I S HG 
Sbjct: 1199 LDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGF 1258

Query: 208  PVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLRACVLQF 267
            P +I SDRD R T+  +  + K +G K   S+A HP+TDGQS+RTIQTL  +LRA V   
Sbjct: 1259 PRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTN 1318

Query: 268  KGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCW--NEVGERKLVGPELVQD 327
              NW  +L  +EF YN++   ++  +P E   G    TP     +EV  R     EL + 
Sbjct: 1319 IQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKH 1378

Query: 328  TSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
                    +E L+ AQ   ++  ++RR+ L   IG+
Sbjct: 1379 LKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGD 1411

[Close]

BLAST of Cmc06g0163251 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-33
Identity = 107/336 (31.85%), Postives = 158/336 (47.02%), Query Frame = 0


Query: 28   PEDSNLQKMLAKVKQGPET---EFELRTDGAIVKQGRLCVPNISELKGAILEEAH-NSAY 87
            PED +  +   K  +  ET    + L  D  I  Q RL VP   + + A++   H ++ +
Sbjct: 1053 PEDMSAFRSYQKKLELSETFRKNYSLE-DEMIYYQDRLVVP--IKQQNAVMRLYHDHTLF 1112

Query: 88   AMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQQVKPVKQRTGGLLNPLLVPEWKG 147
              H G T     +   Y+WP ++  I +YI  C+  Q +K  + R  GLL PL + E + 
Sbjct: 1113 GGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRW 1172

Query: 148  YD-----------------GIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKIVSQHGV 207
             D                  I V+VDR ++ A FI  + T    QL  L    I S HG 
Sbjct: 1173 LDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGF 1232

Query: 208  PVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLRACVLQF 267
            P +I SDRD R T+  +  + K +G K   S+A HP+TDGQS+RTIQTL  +LRA     
Sbjct: 1233 PRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTN 1292

Query: 268  KGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCW--NEVGERKLVGPELVQD 327
              NW  +L  +EF YN++   ++  +P E   G    TP     +EV  R     EL + 
Sbjct: 1293 IQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKH 1352

Query: 328  TSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
                    +E L+ AQ   ++  ++RR+ L   IG+
Sbjct: 1353 LKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGD 1385

[Close]

BLAST of Cmc06g0163251 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-32
Identity = 87/354 (24.58%), Postives = 169/354 (47.74%), Query Frame = 0


Query: 5    SSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQGRLCV 64
            +S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +
Sbjct: 846  NSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILL 905

Query: 65   PNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQQVKP 124
            PN ++L   I+++ H     +H G   +   + + + W  ++++I EY+  C   Q  K 
Sbjct: 906  PNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKS 965

Query: 125  VKQRTGGLLNPL----------------LVPEWKGYDGIWVIVDRLTRTARFILIKVTST 184
               +  G L P+                 +PE  GY+ ++V+VDR ++ A  +    + T
Sbjct: 966  RNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSIT 1025

Query: 185  LDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQS 244
             +Q A+++  ++++  G P  I++D D  FTS+ W          +KFS  + P+TDGQ+
Sbjct: 1026 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQT 1085

Query: 245  KRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYG-RPCRTPVC 304
            +RT QT+E +LR         W  H+SL++ +YNN+  S+  M P E ++   P  +P+ 
Sbjct: 1086 ERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLE 1145

Query: 305  WNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDL-EFQIGE 341
                 ++     E  Q+T    + ++E+L     + K Y D + +++ EFQ G+
Sbjct: 1146 LPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGD 1196

[Close]

BLAST of Cmc06g0163251 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-32
Identity = 87/354 (24.58%), Postives = 169/354 (47.74%), Query Frame = 0


Query: 5    SSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQGRLCV 64
            +S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +
Sbjct: 846  NSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILL 905

Query: 65   PNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQQVKP 124
            PN ++L   I+++ H     +H G   +   + + + W  ++++I EY+  C   Q  K 
Sbjct: 906  PNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKS 965

Query: 125  VKQRTGGLLNPL----------------LVPEWKGYDGIWVIVDRLTRTARFILIKVTST 184
               +  G L P+                 +PE  GY+ ++V+VDR ++ A  +    + T
Sbjct: 966  RNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSIT 1025

Query: 185  LDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQS 244
             +Q A+++  ++++  G P  I++D D  FTS+ W          +KFS  + P+TDGQ+
Sbjct: 1026 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQT 1085

Query: 245  KRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYG-RPCRTPVC 304
            +RT QT+E +LR         W  H+SL++ +YNN+  S+  M P E ++   P  +P+ 
Sbjct: 1086 ERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLE 1145

Query: 305  WNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDL-EFQIGE 341
                 ++     E  Q+T    + ++E+L     + K Y D + +++ EFQ G+
Sbjct: 1146 LPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGD 1196

[Close]

BLAST of Cmc06g0163251 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-32
Identity = 87/354 (24.58%), Postives = 169/354 (47.74%), Query Frame = 0


Query: 5    SSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQGRLCV 64
            +S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  + ++ +
Sbjct: 846  NSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILL 905

Query: 65   PNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQQVKP 124
            PN ++L   I+++ H     +H G   +   + + + W  ++++I EY+  C   Q  K 
Sbjct: 906  PNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKS 965

Query: 125  VKQRTGGLLNPL----------------LVPEWKGYDGIWVIVDRLTRTARFILIKVTST 184
               +  G L P+                 +PE  GY+ ++V+VDR ++ A  +    + T
Sbjct: 966  RNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSIT 1025

Query: 185  LDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQS 244
             +Q A+++  ++++  G P  I++D D  FTS+ W          +KFS  + P+TDGQ+
Sbjct: 1026 AEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQT 1085

Query: 245  KRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYG-RPCRTPVC 304
            +RT QT+E +LR         W  H+SL++ +YNN+  S+  M P E ++   P  +P+ 
Sbjct: 1086 ERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLE 1145

Query: 305  WNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDL-EFQIGE 341
                 ++     E  Q+T    + ++E+L     + K Y D + +++ EFQ G+
Sbjct: 1146 LPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGD 1196

[Close]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL
Match: A0A5D3CIH8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00350 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.2e-163
Identity = 297/357 (83.19%), Postives = 312/357 (87.39%), Query Frame = 0


Query: 1   MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
           MTA+SSGSLLAQFQVRSSLVAE VGRQ EDSNLQKMLAK KQGPE EFELRT+ AIVKQG
Sbjct: 1   MTAESSGSLLAQFQVRSSLVAETVGRQQEDSNLQKMLAKAKQGPEAEFELRTNRAIVKQG 60

Query: 61  RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
           RLCVPNIS+LKGAILEE HN AYAMH GSTKMYRTLK TYWWP MKREIAEY+DRCLI Q
Sbjct: 61  RLCVPNISKLKGAILEETHNLAYAMHPGSTKMYRTLKNTYWWPGMKREIAEYVDRCLICQ 120

Query: 121 QVKPVKQRTGGLLNPLLVPEWK-----------------GYDGIWVIVDRLTRTARFILI 180
           QVK V+Q  GGLLNPL +PEWK                 GYDGIWVIVDRLT+T RFI I
Sbjct: 121 QVKLVRQSPGGLLNPLPMPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTTRFIPI 180

Query: 181 KVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPK 240
           K TSTLDQLAKLYVD+IVSQ+GVPVSIVSDRDPRFTSKF  SVQKAMGTKLKFS+ FHP+
Sbjct: 181 KETSTLDQLAKLYVDRIVSQYGVPVSIVSDRDPRFTSKFLSSVQKAMGTKLKFSSTFHPQ 240

Query: 241 TDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCR 300
           TDGQ +RTIQTLEDMLRACVLQF GNWDTHLSLMEF YNNSYQS+I MAP EALYG+PCR
Sbjct: 241 TDGQLERTIQTLEDMLRACVLQFMGNWDTHLSLMEFAYNNSYQSNIGMAPFEALYGKPCR 300

Query: 301 TPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
           TPVCWNEVGERKLVGPELVQ TSDNIKLIRENLKIAQDRQKSY DKR+RDLEFQIGE
Sbjct: 301 TPVCWNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYADKRQRDLEFQIGE 357

[Close]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL
Match: A0A5D3C867 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold702G00170 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.3e-160
Identity = 286/300 (95.33%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG
Sbjct: 1118 MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 1177

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ
Sbjct: 1178 RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 1237

Query: 121  QVKPVKQRTGGLLNPLLVPEWKGYDGIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKI 180
            QVKPVKQRTGGLLNPLLVPEWK              TARFILIKVTSTLDQLAKLYVDKI
Sbjct: 1238 QVKPVKQRTGGLLNPLLVPEWK--------------TARFILIKVTSTLDQLAKLYVDKI 1297

Query: 181  VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 240
            VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR
Sbjct: 1298 VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 1357

Query: 241  ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 300
            ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE
Sbjct: 1358 ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 1403

[Close]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL
Match: A0A5A7T6M8 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001790 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.3e-160
Identity = 286/300 (95.33%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG
Sbjct: 1351 MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 1410

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ
Sbjct: 1411 RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 1470

Query: 121  QVKPVKQRTGGLLNPLLVPEWKGYDGIWVIVDRLTRTARFILIKVTSTLDQLAKLYVDKI 180
            QVKPVKQRTGGLLNPLLVPEWK              TARFILIKVTSTLDQLAKLYVDKI
Sbjct: 1471 QVKPVKQRTGGLLNPLLVPEWK--------------TARFILIKVTSTLDQLAKLYVDKI 1530

Query: 181  VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 240
            VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR
Sbjct: 1531 VSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPKTDGQSKRTIQTLEDMLR 1590

Query: 241  ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 300
            ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE
Sbjct: 1591 ACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCRTPVCWNEVGERKLVGPE 1636

[Close]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL
Match: A0A5D3C7J1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00290 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.6e-159
Identity = 287/357 (80.39%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            +T K SGSLLAQFQVRSSLV EIV RQ EDSNLQK   K K+G E EFELRTDGAIVKQG
Sbjct: 1262 VTTKDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQG 1321

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELK AILEEAH+SAYAMH GSTKMYRTLKKTYWW  MK+EIAEY+DRCLI Q
Sbjct: 1322 RLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQ 1381

Query: 121  QVKPVKQRTGGLLNPLLVPEWK-----------------GYDGIWVIVDRLTRTARFILI 180
            QVKPV+QR GG LNPL VPEWK                 G+DGIWVIVDRLT+T RFI I
Sbjct: 1382 QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPI 1441

Query: 181  KVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPK 240
            K+TSTLDQLA+LYVDKIVSQ+GVPVSIVSDRDPRFTSKFWPS+QKAMGT LKFST+FHP+
Sbjct: 1442 KMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQ 1501

Query: 241  TDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCR 300
            TDGQS+RTIQTLEDMLRACVLQ KG+WDTHL LMEF YNN+YQSSI MAP EALYGRPCR
Sbjct: 1502 TDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCR 1561

Query: 301  TPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
            TPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQKSY DKRRR+LEFQ+G+
Sbjct: 1562 TPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGD 1618

[Close]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.8e-159
Identity = 286/357 (80.11%), Postives = 310/357 (86.83%), Query Frame = 0


Query: 1    MTAKSSGSLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKVKQGPETEFELRTDGAIVKQG 60
            +T + SGSLLAQFQVRSSLV EIV RQ EDSNLQK   K K+G E EFELRTDGAIVKQG
Sbjct: 1056 VTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQG 1115

Query: 61   RLCVPNISELKGAILEEAHNSAYAMHLGSTKMYRTLKKTYWWPDMKREIAEYIDRCLIYQ 120
            RLCVPNISELK AILEEAH+SAYAMH GSTKMYRTLKKTYWW  MK+EIAEY+DRCLI Q
Sbjct: 1116 RLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQ 1175

Query: 121  QVKPVKQRTGGLLNPLLVPEWK-----------------GYDGIWVIVDRLTRTARFILI 180
            QVKPV+QR GG LNPL VPEWK                 G+DGIWVIVDRLT+T RFI I
Sbjct: 1176 QVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPI 1235

Query: 181  KVTSTLDQLAKLYVDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMGTKLKFSTAFHPK 240
            K+TSTLDQLA+LYVDKIVSQ+GVPVSIVSDRDPRFTSKFWPS+QKAMGT LKFST+FHP+
Sbjct: 1236 KMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQ 1295

Query: 241  TDGQSKRTIQTLEDMLRACVLQFKGNWDTHLSLMEFTYNNSYQSSIDMAPCEALYGRPCR 300
            TDGQS+RTIQTLEDMLRACVLQ KG+WDTHL LMEF YNN+YQSSI MAP EALYGRPCR
Sbjct: 1296 TDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCR 1355

Query: 301  TPVCWNEVGERKLVGPELVQDTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEFQIGE 341
            TPVCWNEVGERKLVGPELVQ T++NIKLIRENL+ AQDRQKSY DKRRR+LEFQ+G+
Sbjct: 1356 TPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGD 1412

The following BLAST results are available for this feature:

BLAST of Cmc06g0163251 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11723.1	6.6e-163	83.19	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037251.1	6.9e-160	95.33	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK07530.1	6.9e-160	95.33	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK06319.1	3.4e-159	80.39	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0053246.1	9.9e-159	80.11	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0163251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	4.6e-34	32.14	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	1.3e-33	31.85	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	1.1e-32	24.58	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.1e-32	24.58	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.1e-32	24.58	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIH8	3.2e-163	83.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5D3C867	3.3e-160	95.33	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7T6M8	3.3e-160	95.33	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3C7J1	1.6e-159	80.39	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold59...	[more]
A0A5A7U2V7	4.8e-159	80.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]

BLAST of Cmc06g0163251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 302..322
None	No IPR available	GENE3D	1.10.340.70		coord: 32..123 e-value: 2.8E-17 score: 64.7
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 58..274
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 69..124 e-value: 3.5E-17 score: 62.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 130..323 e-value: 3.0E-39 score: 136.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 120..281 score: 16.22312
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 139..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0163251.1	Cmc06g0163251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding