Cmc06g0162911 (gene) Melon (Charmono) v1.1

Overview
NameCmc06g0162911
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
LocationCMiso1.1chr06: 12050820 .. 12051320 (+)
RNA-Seq ExpressionCmc06g0162911
SyntenyCmc06g0162911
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAAACCCATTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTGATTGGACAAGTGATACATCTGATAGATGTTCCACTTCTGGCTTCATCGCCTTCCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAATCTCTCGTTCCTCCATAGAAGCAGAATATCGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCAACAACTTTTATGCGATCTCCATGTTTCCCTTAAGACATCACCAACATTATGGTGTGATAACGTTTCCGCTATATCTCTGGCTCACAATCCAGTTTTTCATGCTCACACCAAACACATTGAAATTAATTATCACTTTGTTCGGGAAAAAAGTTCTTTGCAAAGACATCTCCGTCCGTTACATCTCTTCCAACAACCAACTTGCTGA

mRNA sequence

ATGCATAAACCCATTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTGATTGGACAAGTGATACATCTGATAGATGTTCCACTTCTGGCTTCATCGCCTTCCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAATCTCTCGTTCCTCCATAGAAGCAGAATATCGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCAACAACTTTTATGCGATCTCCATGTTTCCCTTAAGACATCACCAACATTATGGTGTGATAACGTTTCCGCTATATCTCTGGCTCACAATCCAGTTTTTCATGCTCACACCAAACACATTGAAATTAATTATCACTTTGTTCGGGAAAAAAGTTCTTTGCAAAGACATCTCCGTCCGTTACATCTCTTCCAACAACCAACTTGCTGA

Coding sequence (CDS)

ATGCATAAACCCATTGTCATTCACTTTTCAGCCGTCAAACGCATCCTCAGATATCTCCGTGGTACTCCAACCCTTGGAATAAAATTTCGAAAAGGTTCGTTCTCTCTACAAACCTTTTGTGATTCTGATTGGACAAGTGATACATCTGATAGATGTTCCACTTCTGGCTTCATCGCCTTCCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACAATCTCTCGTTCCTCCATAGAAGCAGAATATCGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCAACAACTTTTATGCGATCTCCATGTTTCCCTTAAGACATCACCAACATTATGGTGTGATAACGTTTCCGCTATATCTCTGGCTCACAATCCAGTTTTTCATGCTCACACCAAACACATTGAAATTAATTATCACTTTGTTCGGGAAAAAAGTTCTTTGCAAAGACATCTCCGTCCGTTACATCTCTTCCAACAACCAACTTGCTGA

Protein sequence

MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAFLGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC
Homology
BLAST of Cmc06g0162911 vs. NCBI nr
Match: KAA0037203.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK13870.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           ++ P +    AVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF
Sbjct: 155 LNDPSLYRRLAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 214

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV
Sbjct: 215 LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 274

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC 167
           SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC
Sbjct: 275 SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC 320

BLAST of Cmc06g0162911 vs. NCBI nr
Match: XP_016901898.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 9.6e-83
Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           ++ P +    AVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF
Sbjct: 137 LNDPSLYRRLAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 196

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV
Sbjct: 197 LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 256

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC 167
           SAISLAHNPVFHAHTKHIEINYHFV EKSSLQRHLRPLHLFQQPTC
Sbjct: 257 SAISLAHNPVFHAHTKHIEINYHFVWEKSSLQRHLRPLHLFQQPTC 302

BLAST of Cmc06g0162911 vs. NCBI nr
Match: KAA0045362.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68
Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           MHKP VIHFSAVKRILRYL GTPTLGIKFRKGSFSLQTFCDSDW +DTSDR STSGFIAF
Sbjct: 464 MHKPTVIHFSAVKRILRYLCGTPTLGIKFRKGSFSLQTFCDSDWAADTSDRRSTSGFIAF 523

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQS +SRSS EAEY SLATTT DLYWI+QLLCDLHV LKTSPTLWCDNV
Sbjct: 524 LGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNV 583

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREK 149
           SAISLAHNPVFHA TKHIEI+YHFV EK
Sbjct: 584 SAISLAHNPVFHARTKHIEIDYHFVWEK 611

BLAST of Cmc06g0162911 vs. NCBI nr
Match: XP_016902250.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 129/148 (87.16%), Postives = 138/148 (93.24%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           +HKP VIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDS+W  DT DRCSTSGFIAF
Sbjct: 58  IHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCSTSGFIAF 117

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQST+SRSS EAEYRSLATTTVDLYWI+QL+CDLHV LKTSPTLW DNV
Sbjct: 118 LGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNV 177

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREK 149
           SAISLAHNP+FHA  KHI+I+YHFV +K
Sbjct: 178 SAISLAHNPIFHARIKHIKIDYHFVWKK 205

BLAST of Cmc06g0162911 vs. NCBI nr
Match: XP_016901044.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 9.1e-65
Identity = 128/148 (86.49%), Postives = 132/148 (89.19%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           MHKP VIHFS VKRILRYL GTP  GIKFRK  FSLQTFCD DW  DTSDR STS FIAF
Sbjct: 48  MHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAF 107

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQST+SRSS EAEY SLATTTVDLYWI+QLLCDLHV LKTSPTLWCDNV
Sbjct: 108 LGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNV 167

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREK 149
           SAISLAHNPVFHA TKHIEI+YHFVR+K
Sbjct: 168 SAISLAHNPVFHARTKHIEIDYHFVRKK 195

BLAST of Cmc06g0162911 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-38
Identity = 78/149 (52.35%), Postives = 103/149 (69.13%), Query Frame = 0

Query: 1    MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSLQTFCDSDWTSDTSDRCSTSGFIA 60
            MH P   H++A+KR+LRYL GTP  GI  +KG + SL  + D+DW  DT D  ST+G+I 
Sbjct: 1256 MHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIV 1315

Query: 61   FLGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDN 120
            +LG +PISWSSKKQ  + RSS EAEYRS+A T+ +L WI  LL +L + L   P ++CDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 121  VSAISLAHNPVFHAHTKHIEINYHFVREK 149
            V A  L  NPVFH+  KHI ++YHF+R +
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQ 1404

BLAST of Cmc06g0162911 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.8e-38
Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0

Query: 1    MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKG-SFSLQTFCDSDWTSDTSDRCSTSGFIA 60
            MH P   H  A+KRILRYL GTP  GI  +KG + SL  + D+DW  D  D  ST+G+I 
Sbjct: 1273 MHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332

Query: 61   FLGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDN 120
            +LG +PISWSSKKQ  + RSS EAEYRS+A T+ ++ WI  LL +L + L   P ++CDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 121  VSAISLAHNPVFHAHTKHIEINYHFVREK 149
            V A  L  NPVFH+  KHI I+YHF+R +
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQ 1421

BLAST of Cmc06g0162911 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDSDWTSDTSDRCSTSGFIA 60
           MH+P +  F  +KR+LRY++GT   G+   K S  ++Q FCDSDW   TS R ST+GF  
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FLGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYW 98
           FLG N ISWS+K+Q T+SRSS E EYR+LA T  +L W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc06g0162911 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.4e-20
Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 0

Query: 8    HFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAFLGSNPIS 67
            H+ AVK ILRYLRGT    + F      L+ + D+D   D  +R S++G++       IS
Sbjct: 1147 HWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAIS 1206

Query: 68   WSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNVSAISLAH 127
            W SK Q  ++ S+ EAEY +   T  ++ W+++ L +L +  K    ++CD+ SAI L+ 
Sbjct: 1207 WQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSK 1266

Query: 128  NPVFHAHTKHIEINYHFVRE 148
            N ++HA TKHI++ YH++RE
Sbjct: 1267 NSMYHARTKHIDVRYHWIRE 1285

BLAST of Cmc06g0162911 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 98.6 bits (244), Expect = 7.1e-20
Identity = 52/141 (36.88%), Postives = 84/141 (59.57%), Query Frame = 0

Query: 12   VKRILRYLRGTPTLGIKFRKG---SFSLQTFCDSDWTSDTSDRCSTSGFI-AFLGSNPIS 71
            +KR+LRYL+GT  + + F+K       +  + DSDW     DR ST+G++      N I 
Sbjct: 1221 LKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLIC 1280

Query: 72   WSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNVSAISLAH 131
            W++K+Q++++ SS EAEY +L     +  W++ LL  +++ L+    ++ DN   IS+A+
Sbjct: 1281 WNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIAN 1340

Query: 132  NPVFHAHTKHIEINYHFVREK 149
            NP  H   KHI+I YHF RE+
Sbjct: 1341 NPSCHKRAKHIDIKYHFAREQ 1361

BLAST of Cmc06g0162911 vs. ExPASy TrEMBL
Match: A0A5A7T2K7 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00570 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.5e-84
Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           ++ P +    AVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF
Sbjct: 155 LNDPSLYRRLAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 214

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV
Sbjct: 215 LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 274

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC 167
           SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC
Sbjct: 275 SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC 320

BLAST of Cmc06g0162911 vs. ExPASy TrEMBL
Match: A0A1S4E100 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991465 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83
Identity = 156/166 (93.98%), Postives = 159/166 (95.78%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           ++ P +    AVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF
Sbjct: 137 LNDPSLYRRLAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 196

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV
Sbjct: 197 LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 256

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREKSSLQRHLRPLHLFQQPTC 167
           SAISLAHNPVFHAHTKHIEINYHFV EKSSLQRHLRPLHLFQQPTC
Sbjct: 257 SAISLAHNPVFHAHTKHIEINYHFVWEKSSLQRHLRPLHLFQQPTC 302

BLAST of Cmc06g0162911 vs. ExPASy TrEMBL
Match: A0A5A7TPR4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001410 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           MHKP VIHFSAVKRILRYL GTPTLGIKFRKGSFSLQTFCDSDW +DTSDR STSGFIAF
Sbjct: 464 MHKPTVIHFSAVKRILRYLCGTPTLGIKFRKGSFSLQTFCDSDWAADTSDRRSTSGFIAF 523

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQS +SRSS EAEY SLATTT DLYWI+QLLCDLHV LKTSPTLWCDNV
Sbjct: 524 LGSNPISWSSKKQSIVSRSSTEAEYCSLATTTADLYWIRQLLCDLHVPLKTSPTLWCDNV 583

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREK 149
           SAISLAHNPVFHA TKHIEI+YHFV EK
Sbjct: 584 SAISLAHNPVFHARTKHIEIDYHFVWEK 611

BLAST of Cmc06g0162911 vs. ExPASy TrEMBL
Match: A0A1S4E2P5 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991608 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.2e-68
Identity = 129/148 (87.16%), Postives = 138/148 (93.24%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           +HKP VIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDS+W  DT DRCSTSGFIAF
Sbjct: 58  IHKPTVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSNWAGDTYDRCSTSGFIAF 117

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQST+SRSS EAEYRSLATTTVDLYWI+QL+CDLHV LKTSPTLW DNV
Sbjct: 118 LGSNPISWSSKKQSTVSRSSTEAEYRSLATTTVDLYWIRQLVCDLHVPLKTSPTLWYDNV 177

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREK 149
           SAISLAHNP+FHA  KHI+I+YHFV +K
Sbjct: 178 SAISLAHNPIFHARIKHIKIDYHFVWKK 205

BLAST of Cmc06g0162911 vs. ExPASy TrEMBL
Match: A0A1S4DYI8 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991158 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.4e-65
Identity = 128/148 (86.49%), Postives = 132/148 (89.19%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGSFSLQTFCDSDWTSDTSDRCSTSGFIAF 60
           MHKP VIHFS VKRILRYL GTP  GIKFRK  FSLQTFCD DW  DTSDR STS FIAF
Sbjct: 48  MHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAF 107

Query: 61  LGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNV 120
           LGSNPISWSSKKQST+SRSS EAEY SLATTTVDLYWI+QLLCDLHV LKTSPTLWCDNV
Sbjct: 108 LGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNV 167

Query: 121 SAISLAHNPVFHAHTKHIEINYHFVREK 149
           SAISLAHNPVFHA TKHIEI+YHFVR+K
Sbjct: 168 SAISLAHNPVFHARTKHIEIDYHFVRKK 195

BLAST of Cmc06g0162911 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 66/153 (43.14%), Postives = 93/153 (60.78%), Query Frame = 0

Query: 4   PIVIHFSAVKRILRYLRGTPTLGIKF-RKGSFSLQTFCDSDWTSDTSDRCSTSGFIAFLG 63
           P + H  AV +IL Y++GT   G+ +  +    LQ F D+ + S    R ST+G+  FLG
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468

Query: 64  SNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYWIQQLLCDLHVSLKTSPTLWCDNVSA 123
           ++ ISW SKKQ  +S+SS EAEYR+L+  T ++ W+ Q   +L + L     L+CDN +A
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528

Query: 124 ISLAHNPVFHAHTKHIEINYHFVREKSSLQRHL 156
           I +A N VFH  TKHIE + H VRE+S  Q  L
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRERSVYQATL 561

BLAST of Cmc06g0162911 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 0

Query: 1   MHKPIVIHFSAVKRILRYLRGTPTLGIKFRKGS-FSLQTFCDSDWTSDTSDRCSTSGFIA 60
           MH+P +  F  +KR+LRY++GT   G+   K S  ++Q FCDSDW   TS R ST+GF  
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FLGSNPISWSSKKQSTISRSSIEAEYRSLATTTVDLYW 98
           FLG N ISWS+K+Q T+SRSS E EYR+LA T  +L W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037203.11.1e-8394.58putative mitochondrial protein [Cucumis melo var. makuwa] >TYK13870.1 putative m... [more]
XP_016901898.19.6e-8393.98PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
KAA0045362.12.3e-6889.86putative mitochondrial protein [Cucumis melo var. makuwa][more]
XP_016902250.11.5e-6787.16PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
XP_016901044.19.1e-6586.49PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q9ZT942.0e-3852.35Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW29.8e-3852.35Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P925191.7e-2153.06Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P109785.4e-2037.86Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041467.1e-2036.88Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A5A7T2K75.5e-8494.58Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S4E1004.7e-8393.98uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
A0A5A7TPR41.1e-6889.86Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S4E2P57.2e-6887.16uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
A0A1S4DYI84.4e-6586.49uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
Match NameE-valueIdentityDescription
AT4G23160.11.2e-2743.14cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.2e-2253.06DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 64..148
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 64..148
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 37..148
e-value: 8.87749E-61
score: 182.668
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 8..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc06g0162911.1Cmc06g0162911.1mRNA