Cmc06g0162421 (gene) Melon (Charmono) v1.1

Overview
NameCmc06g0162421
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPlant transposase
LocationCMiso1.1chr06: 11251274 .. 11253251 (-)
RNA-Seq ExpressionCmc06g0162421
SyntenyCmc06g0162421
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACATTTATGGTTTATTATTATTATTATTATTATTATTATTATTATTATATTATTATTATATTATTTATCTGTGGAGGCTTTGTTTATTTAATTTGTTTTGGCATGTCCTCCAATTGCATTTATTTTATGAACTTCTCAATTAAGTTAGAGCCTAGAGGATCATTTATAAATTTTTTAATCACCTTTATTCCTATGAATGCATTCTGTTTAAAGTGTACCTAGGTCTCAGTTAATGTTTGTTAGGAGAGTGTACCTCTTAGGATTATCATCTGATATGTACCGACTGATGTAGAAAAATCAAAGCTAAAAACAAGGTACAAAGTATATTCATCTTATAATATGTGGTGGTTCTTATAACTTCTATACATTTTGTTTTGGTAAGTTCTATGTAGTTGAGTTTTTTTAGGTGGTTCCAGTCCTAGTTAAAGTAATGTAGATTGGTTTTTTAACCCTTCGGTACTCTCTTTTTGTGGTTTGGACTTGATTTAAAGTGTGTGCAAAAAAGAATTATGGTTTTATTTTTATCTTTTTAGTATAAAAATTGAGGGAGAGGAAATTTGAATCAAAGATCTCTCATCTTCAAGTTCATATAGGTACCAATTGAGCTAAATTTTTGTTGGCTAGTTTTTCTTTTTTTTTTTATAATTTTGTTCATATAAAAAAATCTTTCTTTAGCATTTATTATTGTAGTTTTTCTAGTACAACTTGGGACGGGTTATGGAAAAGGAAATATTAAAAGATGTGTATTATGTTTATTATGATTTTTAGAAACATTGATAGTTACCGATGTAAAAATAATTGTCTACCTTTTTGTATTTACACATTTATGTAATTTAGGAGCGTATCAAAGAAATTGACAATGAAGGGATAAACACTTCTTCAAACGGTGTGGCAAATGATGCAATAAGTAAAGTTCTTGGTATTGATCGTGGTCATATTAGAGCATTTGGATTTGGAGTCACCACATCGAAGCTTTCTTTATTGTCTTAAACATATCGTCATTATGCCAAATTCGAAGAGAAGTGTGAGAAGATGGAGGTTGAAATGTCTCAAATGAAATCTTTAATATCTCACCTTCTTAAATCACAATTATAAAGTTTCATAGCATATTAAGTTTATATTCTTTATTTCTAATATTTGTTTAACTTGTACATATTATTTTTCTATTTTCTAACTTGTATACATTAGGGTAATGGAAGCGACCAACTTTCTAATGCTACCAATGATCAAGTGGTTAACAATGTTGCTACTAACTCGATTGGAACTTCACCTCTGGTAAGGTCTTTAATTGTTTATTTCTAATACTTTATTTCTAATTGGTATAACTTGCTCATTATGTTTAATATTGCATTTTATATTGCTTTGTCGGTGTAGAGTATTAATAACAACAATACTCTCCGCAAGTGCACATTGCTAGATTGGGGTGGTACAGGAGAGGTGGTTTATGAAGGTTGATGGTCCTCAAATGATCCTAAAGTTACTGTTCACCATGTTCCTCTCGGTCCATATGCTGTTAGAGTTTGGGTAGACTTTCCAAACAAGTCGGTTGCATTTTTATGGAGACCTAACTCAGAAATGACATACATTGAGGATGTTGTTGGAAGCACAGTAGCATGGCCTCTTGACAAAGTTATTTTAAGTATGTACATTCTTTAAGTATTAACTTCTAGCTAGCTTTTTCAACTAAAATCTTTGTGTATAAACTTAATCATTCATTTAGTTTTTTTTCATATTTTTTTTTGTAGGTCGATAAAAGAACAATTGTACAAAGCCCAAGAATGTCATTACCAAGACACAACAAGCTTCAAGTATTTAGATTTGTATCCTATTATCTTTCTGGAACTAATGTGTAGGTTGATCATTGTATTGGGTTGAATGATATATTAGTGACTATCTTTTGTGAAAATACTTAACTACAAAAGTAGCATTTTGTGCAAGATAATATAAATCTTTTGTGAAAATAACATAAATAACATT

mRNA sequence

CACATTTATGGTTTATTATTATTATTATTATTATTATTATTATTATTATATTATTATTATATTATTTATCTGTGGAGGCTTTGTTTATTTAATTTGTTTTGGCATGTCCTCCAATTGCATTTATTTTATGAACTTCTCAATTAAGTTAGAGCCTAGAGGATCATTTATAAATTTTTTAATCACCTTTATTCCTATGAATGCATTCTGTTTAAAGTGTACCTAGGTCTCAGTTAATGTTTGTTAGGAGAGTGTACCTCTTAGGATTATCATCTGATATGTACCGACTGATGTAGAAAAATCAAAGCTAAAAACAAGGTACAAAGTATATTCATCTTATAATATGTGGTGGTTCTTATAACTTCTATACATTTTGTTTTGGTAAGTTCTATGTAGTTGAGTTTTTTTAGGTGGTTCCAGTCCTAGTTAAAGTAATGTAGATTGGTTTTTTAACCCTTCGGTACTCTCTTTTTGTGGTTTGGACTTGATTTAAAGTGTGTGCAAAAAAGAATTATGGTTTTATTTTTATCTTTTTAGTATAAAAATTGAGGGAGAGGAAATTTGAATCAAAGATCTCTCATCTTCAAGTTCATATAGGTACCAATTGAGCTAAATTTTTGTTGGCTAGTTTTTCTTTTTTTTTTTATAATTTTGTTCATATAAAAAAATCTTTCTTTAGCATTTATTATTGTAGTTTTTCTAGTACAACTTGGGACGGGTTATGGAAAAGGAAATATTAAAAGATGTGTATTATGTTTATTATGATTTTTAGAAACATTGATAGTTACCGATGTAAAAATAATTGTCTACCTTTTTGTATTTACACATTTATGTAATTTAGGAGCGTATCAAAGAAATTGACAATGAAGGGATAAACACTTCTTCAAACGGTGTGGCAAATGATGCAATAAGTAAAGTTCTTGGTATTGATCGTGGTCATATTAGAGCATTTGGATTTGGAGTCACCACATCGAAGCTTTCTTTATTGTCTTAAACATATCGTCATTATGCCAAATTCGAAGAGAAGTGTGAGAAGATGGAGGGTAATGGAAGCGACCAACTTTCTAATGCTACCAATGATCAAGTGGTTAACAATGTTGCTACTAACTCGATTGGAACTTCACCTCTGAGTATTAATAACAACAATACTCTCCGCAAGTGCACATTGCTAGATTGGGGTGGTACAGGAGAGGTGGTTTATGAAGGTTGATGGTCCTCAAATGATCCTAAAGTTACTGTTCACCATGTTCCTCTCGGTCCATATGCTGTTAGAGTTTGGGTAGACTTTCCAAACAAGTCGGTTGCATTTTTATGGAGACCTAACTCAGAAATGACATACATTGAGGATGTTGTTGGAAGCACAGTAGCATGGCCTCTTGACAAAGTTATTTTAAGTCGATAAAAGAACAATTGTACAAAGCCCAAGAATGTCATTACCAAGACACAACAAGCTTCAAGTATTTAGATTTGTATCCTATTATCTTTCTGGAACTAATGTGTAGGTTGATCATTGTATTGGGTTGAATGATATATTAGTGACTATCTTTTGTGAAAATACTTAACTACAAAAGTAGCATTTTGTGCAAGATAATATAAATCTTTTGTGAAAATAACATAAATAACATT

Coding sequence (CDS)

ATGGAGGGTAATGGAAGCGACCAACTTTCTAATGCTACCAATGATCAAGTGGTTAACAATGTTGCTACTAACTCGATTGGAACTTCACCTCTGAGTATTAATAACAACAATACTCTCCGCAAGTGCACATTGCTAGATTGGGGTGGTACAGGAGAGGTGGTTTATGAAGGTTGA

Protein sequence

MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG
Homology
[Close]
BLAST of Cmc06g0162421 vs. NCBI nr
Match: KAA0037120.1 (uncharacterized protein E6C27_scaffold379G00240 [Cucumis melo var. makuwa] >TYK13953.1 uncharacterized protein E5676_scaffold832G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 8.6e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
          MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG
Sbjct: 1  MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 57

[Close]
BLAST of Cmc06g0162421 vs. NCBI nr
Match: TYK07731.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0 

Query: 1   MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           MEGNGSDQLSNATNDQVVNNVATN IGTSPLSINNNNTLRKCTLLD GGTGEVV EG
Sbjct: 148 MEGNGSDQLSNATNDQVVNNVATNPIGTSPLSINNNNTLRKCTLLDCGGTGEVVAEG 204

[Close]
BLAST of Cmc06g0162421 vs. NCBI nr
Match: TYK21965.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 2   EGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           +GNGSDQLSNATNDQVVNNVATN IGTSP SINNNNTLRKCTLLDWGGTGEVV EG
Sbjct: 329 QGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCTLLDWGGTGEVVAEG 384

[Close]
BLAST of Cmc06g0162421 vs. NCBI nr
Match: TYK00394.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18
Identity = 51/56 (91.07%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 2   EGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           +GNGSDQLSNATNDQVVNNVATN IGTSP SINNNNTLRKCTLLDWGG GEVV EG
Sbjct: 359 QGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCTLLDWGGIGEVVAEG 414

[Close]
BLAST of Cmc06g0162421 vs. NCBI nr
Match: KAA0055644.1 (uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK09898.1 uncharacterized protein E5676_scaffold16G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 3   GNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           GNGSDQ SNATNDQVVNNVATN IGTSP SINNNNTLRKCTLLDWGGTGEVV EG
Sbjct: 72  GNGSDQFSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCTLLDWGGTGEVVAEG 126

[Close]
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match: A0A5D3CQ15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001550 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
          MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG
Sbjct: 1  MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 57

[Close]
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match: A0A5D3C765 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001660 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.6e-20
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = 0 

Query: 1   MEGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           MEGNGSDQLSNATNDQVVNNVATN IGTSPLSINNNNTLRKCTLLD GGTGEVV EG
Sbjct: 148 MEGNGSDQLSNATNDQVVNNVATNPIGTSPLSINNNNTLRKCTLLDCGGTGEVVAEG 204

[Close]
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match: A0A5D3DEJ8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00110 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 2   EGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           +GNGSDQLSNATNDQVVNNVATN IGTSP SINNNNTLRKCTLLDWGGTGEVV EG
Sbjct: 329 QGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCTLLDWGGTGEVVAEG 384

[Close]
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match: A0A5D3CF98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00080 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-19
Identity = 51/55 (92.73%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 3   GNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           GNGSDQ SNATNDQVVNNVATN IGTSP SINNNNTLRKCTLLDWGGTGEVV EG
Sbjct: 72  GNGSDQFSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCTLLDWGGTGEVVAEG 126

[Close]
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match: A0A5D3BM96 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00630 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-19
Identity = 51/56 (91.07%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 2   EGNGSDQLSNATNDQVVNNVATNSIGTSPLSINNNNTLRKCTLLDWGGTGEVVYEG 58
           +GNGSDQLSNATNDQVVNNVATN IGTSP SINNNNTLRKCTLLDWGG GEVV EG
Sbjct: 359 QGNGSDQLSNATNDQVVNNVATNPIGTSPPSINNNNTLRKCTLLDWGGIGEVVAEG 414

The following BLAST results are available for this feature:
BLAST of Cmc06g0162421 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037120.18.6e-23100.00uncharacterized protein E6C27_scaffold379G00240 [Cucumis melo var. makuwa] >TYK1... [more]
TYK07731.11.2e-1994.74Plant transposase [Cucumis melo var. makuwa][more]
TYK21965.12.6e-1992.86Plant transposase [Cucumis melo var. makuwa][more]
TYK00394.11.3e-1891.07Plant transposase [Cucumis melo var. makuwa][more]
KAA0055644.11.3e-1892.73uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK0... [more]
BLAST of Cmc06g0162421 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CQ154.1e-23100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C7655.6e-2094.74Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00... [more]
A0A5D3DEJ81.2e-1992.86Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00... [more]
A0A5D3CF986.2e-1992.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BM966.2e-1991.07Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G0... [more]
BLAST of Cmc06g0162421 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc06g0162421.1Cmc06g0162421.1mRNA