Cmc06g0161491 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0161491
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Serine hydroxymethyltransferase
Location	CMiso1.1chr06: 9891173 .. 9906394 (-)
RNA-Seq Expression	Cmc06g0161491
Synteny	Cmc06g0161491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAAAAAATGTAATGGTTTTTCTTTTTTAACAAGGAAATAAAAAAAATTAACCATATTTTTTCCACTTGCACTTTTGGGACTCACATCCACTTCCGTCTTTCACCTTCCGCCGGACGATCCTCTTCCGTCACATTCTTCCTCACCTCAGTCCGCATTTCCTCATTGTCTCCAGTTCGATCACAAGGTACAACTTTCTCTCTTCTTGATGTCTCCATTTATCCATATAACATAGAATATCACCCCCCAATTCTTCAGTTGATTTGATCTCAAAAAGGAAACCACCAAAGAGATGCTCACGACGCCTCTATCCATTGTATACCAATATATTTACTACCATACAGAAGAAAAATCTTTTGTACTACCATTGCTCATATGATGATATCTGATATTCAGTTGATTTGATCTAAAAAAGGATCGGATTCATGAATCAAGACATCAGTAACCTCAATATCCAAGGAACGAATAAGCCGAAACAAACCACAAAAACCTATGCCACAGTTAATTTAGCTTCTTCTCTTATTATTAACAATTTGAAATATCTTTTGTATCCATATAACATAGGATCCAAAAATATATAAATAAACAAGTGCTTGCGTCGAATGTTTTTGTATGGGAATACCTCATGTCACCTTCCTTTTGTACTCTTTGTAACAATGAAATTTGAGTTTCTTATTTAAAAAAAAAAACAAAAACAAAAACAAAAGCAGATAAGTGCAAACAAAAGACTAGAAACAAACTAAAAACAAGCTAACTAAAGAACAAACCTGAAAAAAAACCCCAGAAAAAGAAACTTAAACTGATTGAGCTACATGGAAGCTTCCCAATTGTTGCAAATAGCTTGTGAAGTGTATCCTGAACAAGATATTGACAAACAAGAAGAACATCTATAAGAAACCTTAATCTGCAATGTTTTAGAGTAATCCCACCAAAAAGAAGCCTTATCTTCAGTGTTGAGTAGCATTCCTATTTATTACTTCTCTCATTTTTAGCCCCTAGTTTTTGCAAAAGTATTGTTTAAAATAAGAAACCATGTCATTGATAAATGAAATATCCAATAAGCCTCGTAAAGAGATACATGAAGAACCAAAGGAAACCCCTAGCAATATAGAAAGATACCAAAACCAAGGGGAAAGGGGGTGACAAGAGAAAGATGTATGATGACTTGACAATGCAAGATGCCCTCAATACAAGGGTAAAACCAAACAAAATAACAATCCAAGGAACATCAAATCGAGGCACCCTATAAACAAACAAAGGTCAAACCAAAAGCACCCACTAATCAAACCAACCGACCACAAACGATGTAGTAGGAATAGAGTATTATGGCCAAAACCTTAATTTATTAGGATTAGGATTAGGATTAAGATTAGTGTCTTTGGTTTATTAGGATTAGATTTAGTTTCTTTTATTAATTAGGATTAGGATTAGAATTAAGTTTACTTTTGTTAAGTTTCTCTTATTAATTAGGATTAGGAATAGTTTACTTTTGTTAAGTTTCTCTTATTAATTAGGATTAGGATTAGGATTAAGATTAGTTTAATGTTGCTATATATATAAACCTAAAACCTATAAGTAAATCTCCTCCTGAGTGGACAATGGATACTTGAAATTTGGATGACAATTTGTTCACCTTGCATATTGAAAAACAATATGAAAATTTGTCTAAATTATGGAGATGAAAAAAAAACCAACCCGACCCAACCCGGATTTTTTGGATTGGGTTAGGTTGGCCCTTGCATATTGAACCGATAGGGTTCATTTTTTGCCAACCCGGATACTTTGGGTTGGTCCGTAATTTTTCTCCAACCCGACTTATATGTACACCCCTATTTTCTTCTAAGCTTCCTTCGTTCTTCTACCTTGTTCCCTATGAGGTACGGGAGGGTAAGGAAACGTATCTTTTAGAAGATTAGTGGAATAGACCCCTCTATTATTTGTTTCCTTGTCTTTATCATTTGTCTTCCATTAGAAAATGTTTTACATTTGACTTTCTTGTTTGGTCGAGGAGCTCTATTACTTTCTGGTTTGGCGTTATTGACTAATAGGGAATGACAAATGTTATCGTTCTCCTTTATTTGATTGGAGAGTTTTGGTATTGGCCTTGGGAAAAGGAATGTGCTTAGAGTCTCAACCCACTATAGGGTTTCTTTTTGTAAGTCATTCTTTTAATATTTGTTAAATCCCTCTCGTGCTAGTAAGTCTATCTTTGATGCCTTGTGGAGAACTAAGATTCCAATGAACGTTAATTCTATTCTTGGTTAAATTTACTTGGTCATGTGAACTTGATCCCTTCTGTTGTATTCTTTGTTGGACTGCAAAAAAAGACCTAGATAATCTCCTTTGGAGTTGTGAGTTGGTGAGGTCGGATTGGAACGGTCTTTTTTAGAAGTTCGACTTCTTGTTAGCTCCTCATAGGAGTACTAGTGGCTCGATCGATGAGTTCCTCCTACATCTACCTTTTAGGAATAAGTGTTCTCTTCATAAAGCTAGATGTGCGCTTTTGCTAGGCCACCGGTCACACAGGTTTATCATAGAAAGAGGAAGAAGGGTAGGAAGGACATTTCAATGTAGACAAATGGGTAGTTGGAATGGTCAGTGGTCCCCGGGAGGGGGGGGGGCACGTGGCAGCAGTGGAGGGAGGATATATAGTGAAAGCTTAGCTAGGGTTGGGGGATTATGAAAGAATGTTTTGAGTGGACTTCCTAGTTCATGAGTGGGAGAGAACAACCCTCTTACTTGGCTGTACATCATTTTGTGAGAAACTCTTTTGTAATGAATGCTCTTCCGATATATATATAAATAACTTCAGTTTGACTTCATTGATCTGAGTATATTCAATACTGCTTATTATTGTGTGTGTGTAGTGCTGTTGTGGTGTGTGTTTGTGTGTTGTATAACGTTAACAGGGAGAGGGAAGTCTAACAACTTTGTTGTGAGTTTTATGGGGTGAGAGAAATAGCATGGTGATTAAAGGGGTGGAGAGGAACCTGAGTGAAGTGTGGGCTCCTAATAAAGTTTTATGCCTCCTTTTGGGCTTCGATTTCATGATTTTTTGTAACTACTCTTATAGAAGTGGAAAAACAAGATGCATTTTAGGAAGGGGAGAAGGGATGTTCGTGTTTGGATTCGTAATCCTAGTAGGGTTATACGTATAAATCCTTGTTTAGTCTGTTGTTGTTAGACTTCTCTCGCCTTAAAGGGTTGATTTTTGATGTGGTCTGGAGGACTAAGGTTTCGAAGAAAGTTAGATTCTTTATCTAGCAAGTTTTCTTGGTCGGGTTAATACCGTCAATAGGCTTGTCAAGTGGAGGACGTTACTTGGTGCGCCTTTTTGTTGCATGCTTTGTCAGAAGGTGGAGGAAGATCTTGAGCACCTGTTTTGGGATTGCCTTTATTTGTAGGATGTGTGGAGTTCTTTCCTTTAGGAGTTTGGAGTTTGCTGGCTCTCGAGGGTCAAAGTGACGATCGAGGAGCCTCCTCTATCCACCCTCCAAAGACAAAGGAGATTTTTCTTAGCTTGTCAGGGTGTATGCTATCATTGGGACATTTAGGATGAGAGGAATTGAGGAAAGGTCTGGTCTTTCGGGGTAGGGAGAGAGAGCATAATGAGTTATGGTCGTTGATTAGATTTAATGTGTCACTGTGGACTTCGATTGCAAAGCACTTTTGTAATTATTCCATTGATAACATTTTATTTCGTTGGTCCCCTTCTTTTAGTTGGTGTGTTTTGTTAGGCTCCCTTTTTTGTATGCCCTTGTTTTCTTTCATTCTTTCTGGATGAAATTTTTTGATTTCATTAAAAAAAAAAAAAAAGAGATGCATTAATGTAAAAAAAAAAAAAAAGAAGTAGCAGAGATTGTCAGAATAACGTTTTTTTCTGCCTAAGCAAGTACTTTTTAAGCGTAGGTAGAAAGTTTGGTATCCTAATGTATGGTTATACAGTGGATAAGAAAGATATATTTATCCCAATAACTCGTTTTATATAACAATATACAATTTCCTCCAATCAGTAATCACAACCACAACGCATAACGTAATCTGCCCTTACTTCGCATGAGCAATGTCTTAGTGTCTCTTGTTCCCCAAGACAAATAAAAAGCTATATGTGCACCTAAACTGTATCATGTCCACATTAATTAGCAAAATTCAAATCAAAATTATCACCTGACAATCCTAAGGACCTTAGATCCCAGAGTACCATGTGATTATCAGTGCCCCCAGTTAAAAGCTTGTAGTAGTTCCTTCCAAGTAAAGCAGAAGCTAAGGCTTGAGCATTCTTTTTCACCTGCTGCATATATGCCTTCTACTCTGGAGTAGCCACTTGTTTTAGGGACACTGCAAGAGCTGCAATATGGTTATTGTGCTGTCTACCTTGTAAGGATGGAAAAACAGCAAAGTTTATCCTCTCCTCAAAGTCATATTCCTTGACGTCATTTCCCTGATACAGAACAATTTCTCTTCCCCATGGCTCTGAACCCTTCTTATAAAAAAATTATACCTCCCCTTGGACCTTGAAGGCTCTTATGAGTAGTTGAAGTCACAACATCACAGTACTCAAAAGGACTCGCACATTCCTGTAACAAAATTTTAAATCACAATCAAAGTATAAACAGAATGGAGACAATTCTTCATTCAAAATTACAAGATCACATGTATGAAGTACTGATGAACTGGACCAAACAATGTAAGTGAAGAAACAATTACACATGTAAACGAATAATACTGAGAACTACATAAGCACACAGTTGAACGGAACTGTATATTAGAACCAAGTAGAAAAGGAAGAGAAAAAATAACATCCTACTGCTGAGAAAAATAATAGATGTTGGTCAAGCTTTCAGTTTTTCTGATAAATACATATCCACCATGAAAGAATAAATACCAAATCGTTTTGGTCCAAAAAAAAAATATCCATGGGGTTGACATCTTGGCCCAACGCACTTGTAAACTAGGGTTAAGTCCTATACGTTACATTTTCCTATCACTAAGTTTCATAGCCATTCATAACCTAAATGCTAAAAACTACAATAAATTTCCACACAACCACCTTTGAAGCCTTTTCTGAGTGTCAGGTAGAACAATTCAATTATTATGAATATATTAACAACCAGCTAAATTGCAACCCAAGAGAATGAGAATGTCATAGTAACTAGAACATATGATAAGAAAACCAAGAACTTTGTGGACCCGAACCAAATTTTTTTTTACACAGATATTGAAGGGATAGTTCATCGCTAAAGATGACGAAAAATTCACACCTTAGCAGCAACAAGGCCACTAATTTGAGCCATATCACACATCAGAACTGCTCCACACTTATCTGCAATCTGCCTAAACCTTGCATAATCCAATTCACGAGGATACGCGCTCCCTCCACAGATAAGTAGTTTAGGGCAAAAGGCAAGCGCCCTCTCCTCGAGCTTATCATAATCTATATAACCAGTTTAGACGGCAAAATTTGCAGACGTGCATGAATAAGGTTGAACGTTAACTCCCCACGTGTGAGGATTAAGATCAAATGCTGCCAAAATGCGCGCTCATGACAAAGGATTTCAATCTCACCTATATATTGATTTCCACCGTAGTACCTCGCACCAGGTATACCTTTTGAGTACTTATTAGTCAAGTGGCTTCCAAGTGCTTCCATTACAGCTCGACGCACATAATTTTCAGAAGCAAACAATTCAATGCCATTGATTTGGCCCTATTTCTCTTTCTTTATAATCCCATACAACTTAGGATCCACAGATCGAAGGGTCTGATTACCCCACGAGCATACAAATCTCCTTCGTGTCTCCATACCAAACTCCCACGAAACTCTCTTCGTAGAACCCAATAAAGATGAAGATTCACTATCTCTTCGCCGCTTCAAGCACACAGAATGATTTTCTTATAAACATTTTAATGTTTGTTCTAAGCTTTTTAAGAGTGATTTTGATTGCTTTTTATTTTACTTTTTTATTTATTATTTTTTTTACAATGACTTGAAGGGAATGTTTGTTGAGATTAATTTTTAGAATCGGTGTTTTGAGCTAAATAATTTAACTATAATTAGTTTTGTAAAAGTGTGACAATTTGTGTTAAAGTTTCATACTTGTATATATAATTTAAATTCAATTTAAAATATTTTAAAGTCATTAATGTTTATAAACAGTTCACATGGACTTTACGAAATGCAAGTAAGTTTTATTTAATTGGCTCAATACCGAATAGTCCATACTTAGGTTGTGTATGACATTGTGTACTTGTATTGTAGATTACATTGTGACATTGTGCTCTTTCAAGGTTGCCAATGTTATATATGCATTTCGGTACATCCATCACTCTTTAGTTGTTGTCGGTCATTGTTATAAACTTGAATAATCAAAATTATGGAGATAATTGATTTTTAGTTATATTTATTTATCACATCCTCAACCAATTAGTTGTAAGTTTGTCTTAATGTGTATTCATGGTTTACTTGGTGTTTGACGGGGGAGCCCTTTATAAATGGACAAGCTGTTCCATATGACCCTAAGTACCATCGGTCCTACTATGAACAAAATAATAGACCCCATAAGTCATGCAAAGGATGTAAGCTGCGATTCGGATGAGTTGGACTTTCACAAATTAGACTTTGGACCGAAGGAGTTAGACTAAACAGATGGCAGACTTTTAAATATCGCATATTCTCAGTAGCTAATTTTATTTTCTTTTTCTTTTTCTTTTTGGTTTTACTATAGCTCTTTTAATTATGGAATGAAATTTCTATTTTATCATTTAAATTATTTAATTTTTCTTTTTGCCCTTAACTATCTATCTATTCAATTTATTATTATTTTTCCAGAACAATTTTTAATCACTTTCTTCTTTTCATTTTATGTCCGGTAAAAATCCTCCACAATATGCATATGATCATATATTTTATAATGCAATTTTCTTAAAGAACAAAGAACATATGTTATTGATCATGAATTGTTTGTCTTGTTTGGTCGTGGTGGTGGTGGTGTGTGTGTGTTTTGTGGCATAGTAGGGAACACTGCAGTTTTTTTATTAACATATATAACAGCCTTAAGAAATACTTTGACTAATGAATCAATTATTCGGATATCATAAGATACATCACAAAGAAAAGGAAAAGAATTTTAGGTTCTATTTGTATCTTAAAATATATAATAACACTTTTTAAGGTCTTCTCTTCTTGAATTAAGAACAAAAAATTCACCGGTACTCGTCAAATATATAAACTCACACATTGAATTTTATGTAAGAAATTATTGAAAAAATTTACAACTTCCCGTTTCCTCTTGTTTCAATTTTTCGTCTCACGTTTCATGTGAAAATTATATATATATGTGAATGTAGCTAAGTGCAAATAGGTTCCTTTTTGGAAGAGATATGAAGACAAACGGTTCGAGAGGTTTGTAGTCACCAATCAAAATTCAAAGTAGAGTGTCGTGATTCTATTTGAGGAAGCATAGATATAGACACCAACACAACAACACGCCATTTTTTAAAAAAAGAAAGTAGGACAAGTTCAAGCAACTGGTGAGAGAGATGGACGGCGACGGTGATCGGTGAGAGGGTTAGGGCAGGGAGGGTTGGTTCCCTGGTGGAGGAATCAGGAAAGAGAAGGTGGAGAGCGTGAAGCTTTTTGTTTTAAGAAAAAATTAAAAATGGATAAACCTAATAATTTTTGCCATTGGGTCGGACTAATGGGCTGTTCCTATGGGTTTTTCTGTTCTTTGGCCGTGTCAGGATTGTGTCTGAAACTATAAAAAAAAAAAATCGACGTGCCAACTATCGTGTCAGAGATGGGTCGAGAACGTATCCAACAACGATAGTTGGCCATATTAGAAGTGTTAGTGCTTCTTAGATGTTGTTGACTTAAGTGGATGTGAGATACTTCTTAGATTCTTTTCCCTAAATTAGTGCTTAGGTGGTGTGGGTGGGTATAGGGTTAAGCATTAAGTTTGAAGTGTTGAATAGATGAATAGGTGAATAGATGGGTGGAAATCCTCACATGGGACTCAACAGATATTTCTTTTGTGTTGGAGAGTTCCCAAGTGTGGAGCGAGAAAGGAAAAGATATTCCAAAGTAGATATGAGTGTGTAAAGTTTAAATTATGTTCTTTGTTGTTTTTCCTTGTATCCAGCAGATCACAATTTAAAATGGATAGTTTTAAACACTATTTTGTGTTTATGATTCTACAATATAGTTGTATTATTATTATTCATCCTCTTGTATAACAGGAGACGTGGAGGAGCAGCCATGTTGGATAAATTGTTTATTATTTATTTTGTTTGTAAATTGTCACATATATGATTGAAATTAAATTGAAATGGAATATCATACCACCATCGTAACCCGCCATTTTTTCCACCACTTGCACTTTTAGGGCTCACATTCACCGTCGGCGAACACCCAATTTTTGCTTTCGTCTTTCACCTTCCGCCGGACGATCCACTTCCGTTACCTTCTTCTTCACCTCACTCCGCATTTCCTCATAGTCTCTGAGTTTGATCACAAGGTACAACTTTCGCTCTTCTTGTTTCCATTTATCCCTCCTCCAACTCGCAAGAATTTCAAAATGGCGATGGTAATTACTAAAAAGCGGCAATATTTTTTGTCATTATATTGTTTAATCAGTATTCGCTGTCTTTCATTCTTACTTACAATTGCATATGAAATTTTTAAGAAGTTTTGTTGTGTTTTAGGGCATCGATCCTAGGCATCCGTGTGAAGTATCGAGGAAGAAAACATGCGAGAAGAGTAACGGCCCTGTCTCTTAATTATTACATCTCCTTTACGTATTATATTTAGTGTTTAACTCCATTTGGTCTGTATGCTGCAGTCAAGGCAATTCAGGCGACGGTCTCAAATTTGGCGGTAAATGTTCTCAAATGAATTGGTTGGAACACTCAAAAGCACATAAAGATTTCTCATGCCAAAAGAAGTTTCTATGCTCGAATTTTCTCTTCTCTTTACCAGAATAAAAGCCTTCTACTACACAGGAGCAACTGACACTGGGTATCTAGCCCATTAATTGGCTTAAATTTCATACATCCTTATTGAACTGCTCATACCCTTTGCCTTATTTTCATCAAACAATGATAATTCATCGTTCGTTTTCTTTTCCCTTCTGCACTAAGTTTCCCATTTAATTGGTACTTACTGGTCTTCGAGATTGCTTATTTTCCCTCCTGTTTGAATGCATGACATGGCAAGAGATCTGACTTTAATTATTTTCTTAGCCAATGTCTCAGACCCATATTTTATTTTTAACCATATACTATGTCTTGAATGACATAATTAAAGCCATTTTATTGATTAAACGTTGGCTAGAAGTACAATAGGGTTATTAACCGTAAAGCCAGAGTGACAAAAGAAATAAAAAGGCTATATTCCTCATGATTGCCTCTCTCTCCAGTCTCCCTCCCCTTTTATGTTTGGTAGCCTCCTCGGCTACCAGCACGCCTCGGCTCCTCTCCTGAGCTATTTATAACCTTTTTTTATCTTTAATTTTGTTTCTTTTGGATTTGGATAGTAGGCCTTATAACTTAGATCTTTCTAGGTAACTGTAGAAAGGTTCTATTGAAGTTTATAGTAAATTAGAGGAAACCATACAAAAGCGGGAAAGAGATAGTTTCTCATGATTTATTAGTTTTTTCTTTTCTTTTGTTTAGGAATTTGGCCTGTCAGATGCAGAATCTTCAAAGAATACAAAGCTCACAGATTGAAAAGGTAAAATCACAACTTCATTTAAAAAAAAAGGGTAAATCAAAAGAATGATTACAACTAAAAATAATTTGTGGCAAGCTGGGTGTGTGACATTGTAAGATCGTACTTTTTGGTTTGGAGGCCTTTTTGTTGGTTGCCTCCCGGTTTGTGGGCTCTTTCTTTGAATGTCCTTGTATTCTATTGTTTTTCTCAATGAAAGTTCAGTTGTTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAGAATGATTTGATGTCAATCTTATCTATTTCTTGAACAAAAGAGTTGGAGGTGATATTCTAAGGCTATTAAGCTTCTGTGTTTTTCTATGCTCATTGCCTTTTATCTTATATTTGATTTTTTATGCTTTAAGGCTAATAACAAAAAAGTGTTCGGTATTCACTCCTTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAGTGGGTATGATGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGTAAATGAAAATATCTCAAAACCTCAAGCATTTACTTTAGGTTTCCCGTTCAGACACTCAAACTGGTCTACCATTTATATCTCTATTAACCTTCAATTTTGATGTTGTAGCTCTTTGTGCCTGCTATCATACAAGTTTTTCCAGTGCTATGAATATTTCCTCATTGATTGTCAGGTATTTGGCAATTTTGTTACATGGTTGAAATTATTACTTATTATTTGGTTTCTCTGCAGCTCCCTGCTTTGATATCTCCACTTGTGTCTCTTATTCAAGATCAGATCATGCATCTAATATAGGCAAGTTTAACCTATGATGGTTTTCTTAATCTGTTATTTTCTTTCTGTAGCTAATTATATTACACCATAGGCAAACATATCGGCTGCTTACCTAAGTGCCAATATGGAGTGGAGTCAACAACAAGAAATTTTTAGAGACTTGAGTTCTGATTGCACTAAATACAAGCTTCTGTATGTCATGCCAGAAAAAGTTGCTAAGTAAGTATTACCTGTTGTTCTCTTAGCGCAATAACTTAATTCGTTATTTTTACCTTCTGTAACATGATCTTTGCTCGTGAATTACGTCAATGTGATATAAGCCAGGCATAATAAACTACTTGGTTATTTTAAACTGACAAGATCAAGTTGATTATTTAATTTTTCTTTTTGCCCTTAACTATCTATCTATTCAAATTATTATTATTTTTCCAGAACAATTTTTAATCACTTTCTTCTTTTCATTTTATGTCCGGTAAAAATCCTCCACAATATGTATATGATCATATATTTTATAATGCAATTTTCTTAAAGAACGAAGAACATAGCAGGGAACACTGCATTAACCTTGGTTGATTTTTTCTTAACATATATAACAACCTTAATAAATACTTTGACTAGTGAATCAATTATTCGGATATCACAAGATACAGCACAAGGAAAATAAAAAGAATTTTATGTTCTATTTGTATCTTAAAAATATATAAGAACATTTTTTAAGGTCTTCTCTTTTTGAATTAAGAACAAAAATTTCACTGGTACTCGTCAAATAATATAAACCTACACATTGAATTTTATGTAAGAAATTATTGAAAAAATTTACAATTTCCCATTTCCTCTAGTTTTAATTTTCCGTTCTCACGTTTCATGTGAAAATTACATATATATGACTTGAGGGAATGTTTGTTGAGATTAACTTTTAGAATCGGTGTTTTGAGCTAAATAATTTAACTATAATTAGTTTTGTAAAAGTGTGACAATTTGTGTTAAAGTTCCATACTTGTATATATAATTTAAATTCAATTTAAAATATTTTAAAGTGATTAATGTTCATAAGCAGTTCACATGTACTTTACGAAATGCAAGTAAGTTTTATTTAATTGGCTCAATACCGAATAGTTCATACTTAGGTCGTGCATGACATTGTGCACTTGTATTGTAGATTATATTGTGACATTGTGCTCTTTCAAGGTTACCAATGTTATATATGCATTTCGGTACATCCATCACTTTTAGTTGTTGTCGGTCATCGCTATAAACTTGAATAACCATATCATGTTCCTTATCTTTATTGTTTTAGAAATTGCACACAAGCAATAACAGTTAGGAGGAAGAAAATGCTTAACCTTAATCTGTGCTTGAGGAAAGTCAACATGATGAGATATTTGGCAAAACCACGACGTACTCTTTTCAAGGTAAGAGGTCCTCTATCTTTTTCAAGCACACACATATGCAATTTTATGTTATTTGATTTTTCAATTTCGTTTTCTTGTAGGGTCAATATGTTTGCTTCAATTCTGTTACTTCAATTGTAAGATTATTCGTCATCATCACTCTCACTCAAGTACAACATCTTTATTGCAATCTAACAACTTTCTTGTATTGCAGCAACGAGGCATCTATCTTGGTATTGATTGGAGAATTGAAGGGGCAGTTACCCCAGTTCAAGTTCAAATATCGGGTAGGTCTTACTCTGATCTAAAAGAATTTAAAGTTGATAATTAATATTTTAAATCTTGTTTTTGTAGGTACTTGTACCGTATATGCAGCGGTGGCTGCGGTAGAAGGAATCTATCACATACAAACCAAAAAGTTGGTAAAATTTTCCGAATTCGAGGCTATTCTAATTGTATACCCGACGACAAAGATGGTGGGTATACAATTTCAAGAATACTTGAGTATGCCAAACATTATGGTTTTTTGCCAAATGGGCGACAGAAAACAAGGTAAATATTTCAATATAGAAAATAAAGTAAATATTTCAATATTTCTATTATAATAAAAATAGAGACTAACAATTGTATTTTTATATTTAGGCTATCAAAGCGGAATTTTGGACTCGAGGTAAGGTAAATAAGTGGACCTTTATCGACCATTTAAATCGTCAACCTTTACTGGTCTTATTGAAGACCGACCAAGATTTTTTCAAATATACCAGGTTAAAAGATGTGGTCGGGTATACGCCCTAATATTACATCTTGAAGCATGGCGTGGTCCACGTTAAAAGATGTAATATTGGGGCGTATACCCGACCACATCTTTTAACCTATCCCTCTGTATTTGAAAAAATCTTGGTCGGTCTTCACTAAGACCAGTAAAGGTTGACGATTTAAATGGTCGATAAAGGTCCACTCATTTACCTTACCTCGAGTCCAAAATTCCGCTTTGATAGCCTAAATATAAAAATACAATTGTTAGTCTCTATTTTTATTATAATAGAAATATTTACTTTATTTTCTATATTGAAATATTTACCTTGTTTTCTGCCGATTGCCCATTTGGCAAAAAAAACCATAATGTTTGGCATACTCAAGTATTCTTGAAATTGTATACCCACCATCTTTGTCGTCGGGTATACAATTAAGAATAGCTTCGAATTCGAAATTTTTTACCAACTTTCCGATTTGTATGCGGTAGATTCCTTCTACCGCAGCCACCGCTGCATATACGGTACAAGTACCTACAAAAACAAGATTTAAAATATTAATTATCAACTTTAAATTCTTTTAGATTAGAGTAAGACCTACTCGATATTTGAACTTGAACCGGGGTAACTGCCCCTTCAATTCTCTAATCAATACCAGGATAGATGCCTCGTTGCTGCAATACAAGAAAGTTGTTAGATTGCAGTAAGGATGTTGTACTTGAGTGAGAGTGATGATGACGAATAATCTTACAATTGATGTAACAGAATTGAAGCGAACATATTGACTCTACGAGAAAACGAAATTGAAAAATCAAATAATATAAAATTGCATATATGTGTGTGCTTGAAAAAGATAGAGGACCTCTTACCTTGAAAAGAGTACGCCATGGTTTTGCCAAATATCTCATCATGTTGACTTTCCTCAAGCACAGATTAAGGTTAAGCATTTTCTTCCTCCTAACCGTTATTGCTTGTGTGCAATTTCTAAAACAATAAAGATAAGGAAATATGATATGGTTATTCAAGTTTATAGCAATGACCGACAACAACTAAAGAGTGATGGATGTACCGAAATGCATATATAACATTGGCAACCTTGAAAGAGCACAATGTCACAATGTAATCTACAATACAAGTGCACAATGCCATACACAACCTAAGTATGGACTATTTGGTATTGAGCCAATTAAATAAAACTTACTTGCATTTCGTAAAGTCCATGTGAACTGTTTATAAACATTAATGACTTTAAAATATTTTAAATTGAATTTAAATTATATATACAAGTATGAAACTTTAACACAAATTGTCACACTTTTACAAAACTAATTATAGTTAAATTATTTAGCTCAAAACACCGATTCTAAAAATTAATCTCAACAAACATTCCCTTCAAGTCATTGTAAAAAAAATAATAAATAAAAAAGTAAAATAAAAAGCAATCAAAATCACTCTTAAAAAGCTTAGAACAAACATTAAAATGTTTATAAGAAAATCATTCTGGGTGCTTGAAGCGGCAAAGAGATGGTGAATCTTCGTCTTTATTGGGTTCTACGAAGAGAGTTTCGTGTGAGTTTGGTATGGAGACACGAAGGAGATGTGTACGCTCGTGGGGTAATCAGACCCTTCGATCTGTGGATCCTAAGTTGTATGGGATTATAAAGAAAGAGAAACAGGGCCAAATCAATGGCATTGAATTGTTTGCTTCTGAAAATTATGTGCGTCGAGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCAAAAGGTATACCTGGTGCGAGGTCTTACGGTGGAAATCAATATATAGGTGAGATTGAAATCCTTTGTCATGAGCGCGCATTTTGGCAGCATTTGATCTTAATCCTCACACGTGGGGAGTTAACGTTCAACCTTATTCATGCACGTCTGCAAATTTTGCCGTCTAAACTGGTTATATAGATTATGATAAGCTTGAGGAGAGGGCGTTTGCCTTTTGCCCTAAACTACTTATCTGTGGAGGGAGCGCGTATCCTCGTGAATTGGATTATGCAAGGTTTAGGCAGATTGCAGATAAGTGTGGAGCAGTTCTGATGTGTGATATGGCTTAAATTAGTGGCCTTGTTGCTGCTAAGGTGTGAATTTTTCGTCATCTTTAGCGATGAACTATCCCTTCAATATCTGTGTAAAAAAATTTTTGGTTCGGGTCCACAAAGTTCTTGGTTTTCTTATCATATGTTTCTTTTTCTGTCTTTTGTTTGCACTTATCTGCTTTTGTTTTTGTTTTTGTTTTTTTTTTTAAATAAGAAACTCAAATTTCATTGTTACAAAGAGTACAAAAGGAAGGTGACATGAGGTATTCCCATACAAAAACATTCGATGCAAGCACTTGTTTATTTATATATTTTTGGATAAAAATAATTTCATCGATAGCATGGAAATATTCGGGGTATATAAAAGGATCCTATGTTATATGGATACAAAAAATAAGGTTATTTTTTCCACTTGCACTTTTAGGGCTCACATCCACTTCCGTCTTTCACCTTCCGCCGGACGATCCTCTTCCGTCACACCTCAGTC

mRNA sequence

TTTTAAAAAATGTAATGGTTTTTCTTTTTTAACAAGGAAATAAAAAAAATTAACCATATTTTTTCCACTTGCACTTTTGGGACTCACATCCACTTCCGTCTTTCACCTTCCGCCGGACGATCCTCTTCCGTCACATTCTTCCTCACCTCAGTCCGCATTTCCTCATTGTCTCCAGTTCGATCACAAGGGCTCACATTCACCGTCGGCGAACACCCAATTTTTGCTTTCGTCTTTCACCTTCCGCCGGACGATCCACTTCCGTTACCTTCTTCTTCACCTCACTCCGCATTTCCTCATAGTCTCTGAGTTTGATCACAAGGGCATCGATCCTAGGCATCCGTGTGAAGTATCGAGGAAGAAAACATGCGAGAAGAGCAATTCAGGCGACGGTCTCAAATTTGGCGGTAAATGTTCTCAAATGAATTGGTTGGAACACTCAAAAGCACATAAAGATTTCTCATGCCAAAAGAAGTTTCTATGCTCGAATTTTCTCTTCTCTTTACCAGAATAAAAGCCTTCTACTACACAGGAGCAACTGACACTGGGAATTTGGCCTGTCAGATGCAGAATCTTCAAAGAATACAAAGCTCACAGATTGAAAAGGCTAATAACAAAAAAGTGTTCGGTATTCACTCCTTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAGTGGGTATGATGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGTAAATGAAAATATCTCAAAACCTCAAGCATTTACTTTAGGTTTCCCGTTCAGACACTCAAACTGGTCTACCATTTATATCTCTATTAACCTTCAATTTTGATGTTGTAGCTCTTTGTGCCTGCTATCATACAAGTTTTTCCAGTGCTATGAATATTTCCTCATTGATTGTCAGGTATTTGGCAATTTTGTTACATGGTTGAAATTATTACTTATTATTTGGTTTCTCTGCAGCTCCCTGCTTTGATATCTCCACTTGTGTCTCTTATTCAAGATCAGATCATGCATCTAATATAGGCAAACATATCGGCTGCTTACCTAAGTGCCAATATGGAGTGGAGTCAACAACAAGAAATTTTTAGAGACTTGAGTTCTGATTGCACTAAATACAAGCTTCTGTATGTCATGCCAGAAAAAGTTGCTAAAAATTGCACACAAGCAATAACAGTTAGGAGGAAGAAAATGCTTAACCTTAATCTGTGCTTGAGGAAAGTCAACATGATGAGATATTTGGCAAAACCACGACGTACTCTTTTCAAGGGTCAATATGTTTGCTTCAATTCTGTTACTTCAATTCAACGAGGCATCTATCTTGGTATTGATTGGAGAATTGAAGGGGCAGTTACCCCAGTTCAAGTTCAAATATCGGGTACTTGTACCGTATATGCAGCGGTGGCTGCGGTAGAAGGAATCTATCACATACAAACCAAAAAGTTGGTAAAATTTTCCGAATTCGAGGCTATTCTAATTGTATACCCGACGACAAAGATGGTGGGTATACAATTTCAAGAATACTTGAGTATGCCAAACATTATGGTTTTTTGCCAAATGGGCGACAGAAAACAAGGTAAATATTTCAATATAGAAAATAAAGTAAATATTTCAATATTTCTATTATAATAAAAATAGAGACTAACAATTGTATTTTTATATTTAGGCTATCAAAGCGGAATTTTGGACTCGAGGTAAGGTAAATAAGTGGACCTTTATCGACCATTTAAATCGTCAACCTTTACTGGTCTTATTGAAGACCGACCAAGATTTTTTCAAATATACCAGGTTAAAAGATGTGGTCGGGTATACGCCCTAATATTACATCTTGAAGCATGGCGTGGTCCACGTTAAAAGATGTAATATTGGGGCGTATACCCGACCACATCTTTTAACCTATCCCTCTGTATTTGAAAAAATCTTGGTCGGTCTTCACTAAGACCAGTAAAGGTTGACGATTTAAATGGTCGATAAAGGTCCACTCATTTACCTTACCTCGAGTCCAAAATTCCGCTTTGATAGCCTAAATATAAAAATACAATTGTTAGTCTCTATTTTTATTATAATAGAAATATTTACTTTATTTTCTATATTGAAATATTTACCTTGTTTTCTGCCGATTGCCCATTTGGCAAAAAAAACCATAATGTTTGGCATACTCAAGTATTCTTGAAATTGTATACCCACCATCTTTGTCGTCGGGTATACAATTAAGAATAGCTTCGAATTCGAAATTTTTTACCAACTTTCCGATTTGTATGCGGTAGATTCCTTCTACCGCAGCCACCGCTGCATATACGGTACAAGTACCTACAAAAACAAGATTTAAAATATTAATTATCAACTTTAAATTCTTTTAGATTAGAGTAAGACCTACTCGATATTTGAACTTGAACCGGGGTAACTGCCCCTTCAATTCTCTAATCAATACCAGGATAGATGCCTCGTTGCTGCAATACAAGAAAGTTGTTAGATTGCAGTAAGGATGTTGTACTTGAGTGAGAGTGATGATGACGAATAATCTTACAATTGATGTAACAGAATTGAAGCGAACATATTGACTCTACGAGAAAACGAAATTGAAAAATCAAATAATATAAAATTGCATATATGTGTGTGCTTGAAAAAGATAGAGGACCTCTTACCTTGAAAAGAGTACGCCATGGTTTTGCCAAATATCTCATCATGTTGACTTTCCTCAAGCACAGATTAAGGTTAAGCATTTTCTTCCTCCTAACCGTTATTGCTTGTGTGCAATTTCTAAAACAATAAAGATAAGGAAATATGATATGGTTATTCAAGTTTATAGCAATGACCGACAACAACTAAAGAGTGATGGATGTACCGAAATGCATATATAACATTGGCAACCTTGAAAGAGCACAATGTCACAATGTAATCTACAATACAAGTGCACAATGCCATACACAACCTAAGTATGGACTATTTGGTATTGAGCCAATTAAATAAAACTTACTTGCATTTCGTAAAGTCCATGTGAACTGTTTATAAACATTAATGACTTTAAAATATTTTAAATTGAATTTAAATTATATATACAAGTATGAAACTTTAACACAAATTGTCACACTTTTACAAAACTAATTATAGTTAAATTATTTAGCTCAAAACACCGATTCTAAAAATTAATCTCAACAAACATTCCCTTCAAGTCATTGTAAAAAAAATAATAAATAAAAAAGTAAAATAAAAAGCAATCAAAATCACTCTTAAAAAGCTTAGAACAAACATTAAAATGTTTATAAGAAAATCATTCTGGGTGCTTGAAGCGGCAAAGAGATGGTGAATCTTCGTCTTTATTGGGTTCTACGAAGAGAGTTTCGTGTGAGTTTGGTATGGAGACACGAAGGAGATGTGTACGCTCGTGGGGTAATCAGACCCTTCGATCTGTGGATCCTAAGTTGTATGGGATTATAAAGAAAGAGAAACAGGGCCAAATCAATGGCATTGAATTGTTTGCTTCTGAAAATTATGTGCGTCGAGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCAAAAGGTATACCTGGTGCGAGGTCTTACGGTGGAAATCAATATATAGGTGAGATTGAAATCCTTTGTCATGAGCGCGCATTTTGGCAGCATTTGATCTTAATCCTCACACGTGGGGAGTTAACGTTCAACCTTATTCATGCACGTCTGCAAATTTTGCCGTCTAAACTGGTTATATAGATTATGATAAGCTTGAGGAGAGGGCGTTTGCCTTTTGCCCTAAACTACTTATCTGTGGAGGGAGCGCGTATCCTCGTGAATTGGATTATGCAAGGTTTAGGCAGATTGCAGATAAGTGTGGAGCAGTTCTGATGTGTGATATGGCTTAAATTAGTGGCCTTGTTGCTGCTAAGGTGTGAATTTTTCGTCATCTTTAGCGATGAACTATCCCTTCAATATCTGTGTAAAAAAATTTTTGGTTCGGGTCCACAAAGTTCTTGGTTTTCTTATCATATGTTTCTTTTTCTGTCTTTTGTTTGCACTTATCTGCTTTTGTTTTTGTTTTTGTTTTTTTTTTTAAATAAGAAACTCAAATTTCATTGTTACAAAGAGTACAAAAGGAAGGTGACATGAGGTATTCCCATACAAAAACATTCGATGCAAGCACTTGTTTATTTATATATTTTTGGATAAAAATAATTTCATCGATAGCATGGAAATATTCGGGGTATATAAAAGGATCCTATGTTATATGGATACAAAAAATAAGGTTATTTTTTCCACTTGCACTTTTAGGGCTCACATCCACTTCCGTCTTTCACCTTCCGCCGGACGATCCTCTTCCGTCACACCTCAGTC

Coding sequence (CDS)

ATGGAGACACGAAGGAGATGTGTACGCTCGTGGGGTAATCAGACCCTTCGATCTGTGGATCCTAAGTTGTATGGGATTATAAAGAAAGAGAAACAGGGCCAAATCAATGGCATTGAATTGTTTGCTTCTGAAAATTATGTGCGTCGAGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCAAAAGGTATACCTGGTGCGAGGTCTTACGGTGGAAATCAATATATAGGTGAGATTGAAATCCTTTGTCATGAGCGCGCATTTTGGCAGCATTTGATCTTAATCCTCACACGTGGGGAGTTAACGTTCAACCTTATTCATGCACGTCTGCAAATTTTGCCGTCTAAACTGGTTATATAG

Protein sequence

METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGIPGARSYGGNQYIGEIEILCHERAFWQHLILILTRGELTFNLIHARLQILPSKLVI

Homology

[Close]

BLAST of Cmc06g0161491 vs. NCBI nr
Match: XP_016901913.1 (PREDICTED: serine hydroxymethyltransferase 6-like isoform X2 [Cucumis melo])

HSP 1 Score: 157.1 bits (396), Expect = 9.4e-35
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           METRR  VRSWGNQTLR+ DPKLYGI++KEKQ QINGIEL ASENYV RAVMEALGSHLT
Sbjct: 113 METRRSSVRSWGNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLT 172

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR YGGNQYI EIEILC ERA
Sbjct: 173 NKYSEGMPGARYYGGNQYIDEIEILCRERA 202

[Close]

BLAST of Cmc06g0161491 vs. NCBI nr
Match: XP_008456065.1 (PREDICTED: serine hydroxymethyltransferase 7-like isoform X1 [Cucumis melo])

HSP 1 Score: 157.1 bits (396), Expect = 9.4e-35
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           METRR  VRSWGNQTLR+ DPKLYGI++KEKQ QINGIEL ASENYV RAVMEALGSHLT
Sbjct: 113 METRRSSVRSWGNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLT 172

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR YGGNQYI EIEILC ERA
Sbjct: 173 NKYSEGMPGARYYGGNQYIDEIEILCRERA 202

[Close]

BLAST of Cmc06g0161491 vs. NCBI nr
Match: XP_004146284.1 (serine hydroxymethyltransferase 7 [Cucumis sativus] >KGN57592.1 hypothetical protein Csa_010427 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 9.4e-35
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           METRR  VRSWGNQTLR+ DPKLYGI++KEKQ QINGIEL ASENYV RAVMEALGSHLT
Sbjct: 113 METRRSSVRSWGNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLT 172

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR YGGNQYI EIEILC ERA
Sbjct: 173 NKYSEGMPGARYYGGNQYIDEIEILCRERA 202

[Close]

BLAST of Cmc06g0161491 vs. NCBI nr
Match: TYK11173.1 (serine hydroxymethyltransferase 6-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 1  METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
          METRRR VRSWGNQTLRSVDP+LYGIIKKEKQ QINGIELFASENYVRRAVMEALGSHLT
Sbjct: 1  METRRRFVRSWGNQTLRSVDPRLYGIIKKEKQFQINGIELFASENYVRRAVMEALGSHLT 60

Query: 61 NKYSKGIPGARSYGGNQYIGEIEILCHERAFWQHLIL 98
          NKYSKGIPGAR YGGNQYI   ++     AF   L++
Sbjct: 61 NKYSKGIPGARYYGGNQYIDYDKLEERALAFCPKLLI 97

[Close]

BLAST of Cmc06g0161491 vs. NCBI nr
Match: KAA0038974.1 (serine hydroxymethyltransferase 6-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 1  METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
          METRRR VRSWGNQTLRSVDP+LYGIIKKEKQ QINGIELFASENYVRRAVMEALGSHLT
Sbjct: 1  METRRRFVRSWGNQTLRSVDPRLYGIIKKEKQFQINGIELFASENYVRRAVMEALGSHLT 60

Query: 61 NKYSKGIPGARSYGGNQYIGEIEILCHERAFWQHLIL 98
          NKYSKGIPGAR YGGNQYI   ++     AF   L++
Sbjct: 61 NKYSKGIPGARYYGGNQYIDYDKLEERALAFCPKLLI 97

[Close]

BLAST of Cmc06g0161491 vs. ExPASy Swiss-Prot
Match: Q9LM59 (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=SHM6 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-29
Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           +E+RR  VR+WGNQ++   DP+++  ++KEKQ Q  GIEL ASEN+V RAVMEALGSHLT
Sbjct: 127 IESRRAVVRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLT 186

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR Y GNQYI +IEILC ERA
Sbjct: 187 NKYSEGMPGARYYTGNQYIDQIEILCQERA 216

[Close]

BLAST of Cmc06g0161491 vs. ExPASy Swiss-Prot
Match: Q84WV0 (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=SHM7 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.8e-28
Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           +E+RR  VR+WG+Q +   DP ++ +++KEKQ Q+ GIEL ASEN+V RAVMEALGSHLT
Sbjct: 123 LESRRAAVRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLT 182

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR Y GNQYI +IE LC ERA
Sbjct: 183 NKYSEGMPGARYYTGNQYIDQIENLCIERA 212

[Close]

BLAST of Cmc06g0161491 vs. ExPASy Swiss-Prot
Match: O23254 (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=SHM4 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23
Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 8  VRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGI 67
          V SWGN +L SVDP+++ +I+KEK+ Q  GIEL ASEN+   AV+EALGS LTNKYS+GI
Sbjct: 4  VSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGI 63

Query: 68 PGARSYGGNQYIGEIEILCHERA 91
          PG R YGGN++I EIE LC  RA
Sbjct: 64 PGNRYYGGNEFIDEIENLCRSRA 86

[Close]

BLAST of Cmc06g0161491 vs. ExPASy Swiss-Prot
Match: Q9SVM4 (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=SHM5 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.5e-22
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 8  VRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGI 67
          V SWGN  L  VDP++Y +I+KEK  Q  GIEL A+EN+   AVMEALGS LTNKYS+G+
Sbjct: 4  VYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGM 63

Query: 68 PGARSYGGNQYIGEIEILCHERA 91
          PG R YGG ++I EIE LC  R+
Sbjct: 64 PGNRYYGGTEFIDEIESLCRSRS 86

[Close]

BLAST of Cmc06g0161491 vs. ExPASy Swiss-Prot
Match: Q54Z26 (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=shmt1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-19
Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 12 GNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGIPGAR 71
          GN  L+ VD +++ ++ +EK  Q  G+EL ASEN+  RAVMEALGSH TNKY++G PG+R
Sbjct: 6  GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSR 65

Query: 72 SYGGNQYIGEIEILCHERA 91
           YGG + + E+E LC +RA
Sbjct: 66 YYGGTEVVDELETLCQKRA 84

[Close]

BLAST of Cmc06g0161491 vs. ExPASy TrEMBL
Match: A0A0A0LAD1 (Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G221750 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           METRR  VRSWGNQTLR+ DPKLYGI++KEKQ QINGIEL ASENYV RAVMEALGSHLT
Sbjct: 113 METRRSSVRSWGNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLT 172

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR YGGNQYI EIEILC ERA
Sbjct: 173 NKYSEGMPGARYYGGNQYIDEIEILCRERA 202

[Close]

BLAST of Cmc06g0161491 vs. ExPASy TrEMBL
Match: A0A1S3C2G6 (Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103496109 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           METRR  VRSWGNQTLR+ DPKLYGI++KEKQ QINGIEL ASENYV RAVMEALGSHLT
Sbjct: 113 METRRSSVRSWGNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLT 172

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR YGGNQYI EIEILC ERA
Sbjct: 173 NKYSEGMPGARYYGGNQYIDEIEILCRERA 202

[Close]

BLAST of Cmc06g0161491 vs. ExPASy TrEMBL
Match: A0A1S4E114 (Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103496109 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.5e-35
Identity = 76/90 (84.44%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           METRR  VRSWGNQTLR+ DPKLYGI++KEKQ QINGIEL ASENYV RAVMEALGSHLT
Sbjct: 113 METRRSSVRSWGNQTLRAADPKLYGIMEKEKQRQINGIELIASENYVCRAVMEALGSHLT 172

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR YGGNQYI EIEILC ERA
Sbjct: 173 NKYSEGMPGARYYGGNQYIDEIEILCRERA 202

[Close]

BLAST of Cmc06g0161491 vs. ExPASy TrEMBL
Match: A0A5A7T654 (Glycine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00540 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.6e-34
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 1  METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
          METRRR VRSWGNQTLRSVDP+LYGIIKKEKQ QINGIELFASENYVRRAVMEALGSHLT
Sbjct: 1  METRRRFVRSWGNQTLRSVDPRLYGIIKKEKQFQINGIELFASENYVRRAVMEALGSHLT 60

Query: 61 NKYSKGIPGARSYGGNQYIGEIEILCHERAFWQHLIL 98
          NKYSKGIPGAR YGGNQYI   ++     AF   L++
Sbjct: 61 NKYSKGIPGARYYGGNQYIDYDKLEERALAFCPKLLI 97

[Close]

BLAST of Cmc06g0161491 vs. ExPASy TrEMBL
Match: A0A5D3CH07 (Glycine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00060 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.6e-34
Identity = 78/97 (80.41%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 1  METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
          METRRR VRSWGNQTLRSVDP+LYGIIKKEKQ QINGIELFASENYVRRAVMEALGSHLT
Sbjct: 1  METRRRFVRSWGNQTLRSVDPRLYGIIKKEKQFQINGIELFASENYVRRAVMEALGSHLT 60

Query: 61 NKYSKGIPGARSYGGNQYIGEIEILCHERAFWQHLIL 98
          NKYSKGIPGAR YGGNQYI   ++     AF   L++
Sbjct: 61 NKYSKGIPGARYYGGNQYIDYDKLEERALAFCPKLLI 97

[Close]

BLAST of Cmc06g0161491 vs. TAIR 10
Match: AT1G22020.1 (serine hydroxymethyltransferase 6 )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           +E+RR  VR+WGNQ++   DP+++  ++KEKQ Q  GIEL ASEN+V RAVMEALGSHLT
Sbjct: 127 IESRRAVVRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLT 186

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR Y GNQYI +IEILC ERA
Sbjct: 187 NKYSEGMPGARYYTGNQYIDQIEILCQERA 216

[Close]

BLAST of Cmc06g0161491 vs. TAIR 10
Match: AT1G36370.1 (serine hydroxymethyltransferase 7 )

HSP 1 Score: 124.4 bits (311), Expect = 6.3e-29
Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   METRRRCVRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLT 60
           +E+RR  VR+WG+Q +   DP ++ +++KEKQ Q+ GIEL ASEN+V RAVMEALGSHLT
Sbjct: 123 LESRRAAVRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLT 182

Query: 61  NKYSKGIPGARSYGGNQYIGEIEILCHERA 91
           NKYS+G+PGAR Y GNQYI +IE LC ERA
Sbjct: 183 NKYSEGMPGARYYTGNQYIDQIENLCIERA 212

[Close]

BLAST of Cmc06g0161491 vs. TAIR 10
Match: AT4G13930.1 (serine hydroxymethyltransferase 4 )

HSP 1 Score: 110.5 bits (275), Expect = 9.4e-25
Identity = 53/83 (63.86%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 8  VRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGI 67
          V SWGN +L SVDP+++ +I+KEK+ Q  GIEL ASEN+   AV+EALGS LTNKYS+GI
Sbjct: 4  VSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGI 63

Query: 68 PGARSYGGNQYIGEIEILCHERA 91
          PG R YGGN++I EIE LC  RA
Sbjct: 64 PGNRYYGGNEFIDEIENLCRSRA 86

[Close]

BLAST of Cmc06g0161491 vs. TAIR 10
Match: AT4G13890.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.7e-23
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 8  VRSWGNQTLRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGI 67
          V SWGN  L  VDP++Y +I+KEK  Q  GIEL A+EN+   AVMEALGS LTNKYS+G+
Sbjct: 4  VYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGM 63

Query: 68 PGARSYGGNQYIGEIEILCHERA 91
          PG R YGG ++I EIE LC  R+
Sbjct: 64 PGNRYYGGTEFIDEIESLCRSRS 86

[Close]

BLAST of Cmc06g0161491 vs. TAIR 10
Match: AT4G32520.1 (serine hydroxymethyltransferase 3 )

HSP 1 Score: 95.1 bits (235), Expect = 4.1e-20
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 16  LRSVDPKLYGIIKKEKQGQINGIELFASENYVRRAVMEALGSHLTNKYSKGIPGARSYGG 75
           L  VDP++  II KEK  Q   +EL ASEN+  RAVMEA+GS LTNKYS+G+PG R YGG
Sbjct: 83  LGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142

Query: 76  NQYIGEIEILCHERA 91
           N+YI ++E LC  RA
Sbjct: 143 NEYIDQLETLCQNRA 157

The following BLAST results are available for this feature:

BLAST of Cmc06g0161491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901913.1	9.4e-35	84.44	PREDICTED: serine hydroxymethyltransferase 6-like isoform X2 [Cucumis melo]	[more]
XP_008456065.1	9.4e-35	84.44	PREDICTED: serine hydroxymethyltransferase 7-like isoform X1 [Cucumis melo]	[more]
XP_004146284.1	9.4e-35	84.44	serine hydroxymethyltransferase 7 [Cucumis sativus] >KGN57592.1 hypothetical pro...	[more]
TYK11173.1	1.4e-33	80.41	serine hydroxymethyltransferase 6-like isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0038974.1	1.4e-33	80.41	serine hydroxymethyltransferase 6-like isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0161491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM59	2.1e-29	66.67	Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=SHM6 PE=2 S...	[more]
Q84WV0	8.8e-28	64.44	Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=SHM7 PE=2 S...	[more]
O23254	1.3e-23	63.86	Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=SHM4 PE=1 S...	[more]
Q9SVM4	9.5e-22	60.24	Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=SHM5 PE=3 S...	[more]
Q54Z26	1.5e-19	53.16	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=shmt1 ...	[more]

BLAST of Cmc06g0161491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAD1	4.5e-35	84.44	Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_3G221750 PE=3 ...	[more]
A0A1S3C2G6	4.5e-35	84.44	Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103496109 PE=3 SV=...	[more]
A0A1S4E114	4.5e-35	84.44	Serine hydroxymethyltransferase OS=Cucumis melo OX=3656 GN=LOC103496109 PE=3 SV=...	[more]
A0A5A7T654	6.6e-34	80.41	Glycine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3CH07	6.6e-34	80.41	Glycine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Cmc06g0161491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22020.1	1.5e-30	66.67	serine hydroxymethyltransferase 6	[more]
AT1G36370.1	6.3e-29	64.44	serine hydroxymethyltransferase 7	[more]
AT4G13930.1	9.4e-25	63.86	serine hydroxymethyltransferase 4	[more]
AT4G13890.1	6.7e-23	60.24	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT4G32520.1	4.1e-20	60.00	serine hydroxymethyltransferase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015422	Pyridoxal phosphate-dependent transferase, small domain	GENE3D	3.90.1150.10	Aspartate Aminotransferase, domain 1	coord: 20..44 e-value: 2.0E-26 score: 94.3
IPR039429	Serine hydroxymethyltransferase-like domain	PFAM	PF00464	SHMT	coord: 17..91 e-value: 2.7E-26 score: 92.1
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 45..91 e-value: 2.0E-26 score: 94.3
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 3..91
None	No IPR available	PANTHER	PTHR11680:SF7	SERINE HYDROXYMETHYLTRANSFERASE 7	coord: 3..91
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 11..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0161491.1	Cmc06g0161491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046655	folic acid metabolic process
biological_process	GO:0019264	glycine biosynthetic process from serine
biological_process	GO:0006565	L-serine catabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0035999	tetrahydrofolate interconversion
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0070905	serine binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity