Cmc06g0161381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0161381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ferredoxin
Location	CMiso1.1chr06: 9824315 .. 9824764 (-)
RNA-Seq Expression	Cmc06g0161381
Synteny	Cmc06g0161381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAGCATCCCCATCACGACCACTTCCTTCCTCCGATATCAGCTATTGACCACCACGTTAAGGTCGGCGCCTAATGTGGGTGAGTGCTTGTTTGGGTTGCAAAAGCGAGGGAGCCGAGTGACGGCGATGGCAACATACAAGGTGAAGCTGATAACACCAAGTGGAGTGAAAGAGATAAAGTGTCCGGATGACAACTACATTCTCAATGTGGCGGAGGATGAAGGGCTGGACCTTCCATACTCATGTAGAGCTGGAGCATGTTCTTCTTGTGCTGGGAAATTGATCTCAGGGAAGGTGGATCAATCAAATGTTAGCTTTCTTGATGATGATCATATTGCCAAAGGGTGGGTAATTAATTGTATGGCTTATCCTCTCTCTGATGTTGTTATTGAGACACACAAGGAGGAGGAATTTACAAATGAGAGAACAAGAAGGAATTCCATTTGA

mRNA sequence

ATGTCCAGCATCCCCATCACGACCACTTCCTTCCTCCGATATCAGCTATTGACCACCACGTTAAGGTCGGCGCCTAATGTGGGTGAGTGCTTGTTTGGGTTGCAAAAGCGAGGGAGCCGAGTGACGGCGATGGCAACATACAAGGTGAAGCTGATAACACCAAGTGGAGTGAAAGAGATAAAGTGTCCGGATGACAACTACATTCTCAATGTGGCGGAGGATGAAGGGCTGGACCTTCCATACTCATGTAGAGCTGGAGCATGTTCTTCTTGTGCTGGGAAATTGATCTCAGGGAAGGTGGATCAATCAAATGTTAGCTTTCTTGATGATGATCATATTGCCAAAGGGTGGGTAATTAATTGTATGGCTTATCCTCTCTCTGATGTTGTTATTGAGACACACAAGGAGGAGGAATTTACAAATGAGAGAACAAGAAGGAATTCCATTTGA

Coding sequence (CDS)

ATGTCCAGCATCCCCATCACGACCACTTCCTTCCTCCGATATCAGCTATTGACCACCACGTTAAGGTCGGCGCCTAATGTGGGTGAGTGCTTGTTTGGGTTGCAAAAGCGAGGGAGCCGAGTGACGGCGATGGCAACATACAAGGTGAAGCTGATAACACCAAGTGGAGTGAAAGAGATAAAGTGTCCGGATGACAACTACATTCTCAATGTGGCGGAGGATGAAGGGCTGGACCTTCCATACTCATGTAGAGCTGGAGCATGTTCTTCTTGTGCTGGGAAATTGATCTCAGGGAAGGTGGATCAATCAAATGTTAGCTTTCTTGATGATGATCATATTGCCAAAGGGTGGGTAATTAATTGTATGGCTTATCCTCTCTCTGATGTTGTTATTGAGACACACAAGGAGGAGGAATTTACAAATGAGAGAACAAGAAGGAATTCCATTTGA

Protein sequence

MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVINCMAYPLSDVVIETHKEEEFTNERTRRNSI

Homology

[Close]

BLAST of Cmc06g0161381 vs. NCBI nr
Match: TYK11179.1 (ferredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 1.3e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60
           MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60

Query: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120
           KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN
Sbjct: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120

Query: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 150
           CMAYPLSDVVIETHKEEEFTNERTRRNSI
Sbjct: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 149

[Close]

BLAST of Cmc06g0161381 vs. NCBI nr
Match: XP_008456215.1 (PREDICTED: ferredoxin-like [Cucumis melo] >KAA0038965.1 ferredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60
           MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60

Query: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120
           KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSN+SFLDDD IAKGWVIN
Sbjct: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNISFLDDDQIAKGWVIN 120

Query: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 150
           CMAYPLSDVVIETHKEEEFTNERTRRNSI
Sbjct: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 149

[Close]

BLAST of Cmc06g0161381 vs. NCBI nr
Match: KAF4357178.1 (hypothetical protein F8388_003325 [Cannabis sativa] >KAF4366359.1 hypothetical protein G4B88_026686 [Cannabis sativa])

HSP 1 Score: 201.1 bits (510), Expect = 6.9e-48
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK--RGSRVTAMATYKVKLITPSGVK 60
           +SS  + +TSF+R Q   T+LR+ PNVG+ LFG  K  RG RVTAMA YKVKLITP G  
Sbjct: 11  LSSTTMMSTSFVRRQPTATSLRAVPNVGQSLFGGLKASRGGRVTAMAAYKVKLITPEGDS 70

Query: 61  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 120
           EI+CPDD Y+L+ AED G+DLPYSCRAGACSSC GK++ GKVDQS+ SFLDDD +A+GWV
Sbjct: 71  EIECPDDTYVLDQAEDAGIDLPYSCRAGACSSCIGKVVEGKVDQSDNSFLDDDQMAEGWV 130

Query: 121 INCMAYPLSDVVIETHKEEEF 140
           + C+AYPLSDVVIETHKEEEF
Sbjct: 131 LTCVAYPLSDVVIETHKEEEF 151

[Close]

BLAST of Cmc06g0161381 vs. NCBI nr
Match: KAF4352271.1 (hypothetical protein G4B88_029227 [Cannabis sativa])

HSP 1 Score: 201.1 bits (510), Expect = 6.9e-48
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK--RGSRVTAMATYKVKLITPSGVK 60
           +SS  + +TSF+R Q   T+LR+ PNVG+ LFG  K  RG RVTAMA YKVKLITP G  
Sbjct: 788 LSSTTMMSTSFVRRQPTATSLRAVPNVGQSLFGGLKASRGGRVTAMAAYKVKLITPEGDS 847

Query: 61  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 120
           EI+CPDD Y+L+ AED G+DLPYSCRAGACSSC GK++ GKVDQS+ SFLDDD +A+GWV
Sbjct: 848 EIECPDDTYVLDQAEDAGIDLPYSCRAGACSSCIGKVVEGKVDQSDNSFLDDDQMAEGWV 907

Query: 121 INCMAYPLSDVVIETHKEEEF 140
           + C+AYPLSDVVIETHKEEEF
Sbjct: 908 LTCVAYPLSDVVIETHKEEEF 928

[Close]

BLAST of Cmc06g0161381 vs. NCBI nr
Match: XP_030510336.1 (ferredoxin-like [Cannabis sativa])

HSP 1 Score: 201.1 bits (510), Expect = 6.9e-48
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK--RGSRVTAMATYKVKLITPSGVK 60
           +SS  + +TSF+R Q   T+LR+ PNVG+ LFG  K  RG RVTAMA YKVKLITP G  
Sbjct: 11  LSSTTMMSTSFVRRQPTATSLRAVPNVGQSLFGGLKASRGGRVTAMAAYKVKLITPEGDS 70

Query: 61  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 120
           EI+CPDD Y+L+ AED G+DLPYSCRAGACSSC GK++ GKVDQS+ SFLDDD +A+GWV
Sbjct: 71  EIECPDDTYVLDQAEDAGIDLPYSCRAGACSSCIGKVVEGKVDQSDNSFLDDDQMAEGWV 130

Query: 121 INCMAYPLSDVVIETHKEEEF 140
           + C+AYPLSDVVIETHKEEEF
Sbjct: 131 LTCVAYPLSDVVIETHKEEEF 151

[Close]

BLAST of Cmc06g0161381 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-42
Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 3   SIPITTTSFLRYQLLTTTLRSAPNVG-ECLFGLQK---RGSRVTAMATYKVKLITPSGVK 62
           S  I +TSFLR Q    +LRS P    + LFGL+    RG RVTAMATYKVK ITP G +
Sbjct: 7   SSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQ 66

Query: 63  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 122
           E++C +D Y+L+ AE+ GLDLPYSCRAG+CSSCAGK++SG +DQS+ SFLDD+ +++G+V
Sbjct: 67  EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYV 126

Query: 123 INCMAYPLSDVVIETHKEE 138
           + C+AYP SDVVIETHKEE
Sbjct: 127 LTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of Cmc06g0161381 vs. ExPASy Swiss-Prot
Match: Q43517 (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SEND33 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-41
Identity = 87/143 (60.84%), Postives = 108/143 (75.52%), Query Frame = 0


Query: 1   MSSIPIT--TTSFLRYQLLTTTLRSAPNVGECLFGLQK-RGSRVTAMATYKVKLITPSGV 60
           M+SI  T  +TSFL  +   T+L++  NVGE LFGL+  R  R+T MA+YKVKLITP G 
Sbjct: 1   MASISGTMISTSFLPRKPAVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPEGP 60

Query: 61  KEIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGW 120
            E +CPDD YIL+ AE+EG DLPYSCRAG+CSSCAGK+ +G VDQS+ +FLD+D  A G+
Sbjct: 61  IEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGF 120

Query: 121 VINCMAYPLSDVVIETHKEEEFT 141
           V+ C+AYP  DV IETHKEEE T
Sbjct: 121 VLTCVAYPKGDVTIETHKEEELT 143

[Close]

BLAST of Cmc06g0161381 vs. ExPASy Swiss-Prot
Match: P16972 (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.0e-41
Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 3   SIPITTTSFLRYQLLTTTLRSAPNVG-ECLFGLQK---RGSRVTAMATYKVKLITPSGVK 62
           S  I  TSF+R      +LRS P+   + LFGL+    RG RVTAMATYKVK ITP G  
Sbjct: 7   SSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEGEL 66

Query: 63  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 122
           E++C DD Y+L+ AE+ G+DLPYSCRAG+CSSCAGK++SG VDQS+ SFLDD+ I +G+V
Sbjct: 67  EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFV 126

Query: 123 INCMAYPLSDVVIETHKEEE 139
           + C AYP SDV IETHKEE+
Sbjct: 127 LTCAAYPTSDVTIETHKEED 146

[Close]

BLAST of Cmc06g0161381 vs. ExPASy Swiss-Prot
Match: Q9ZTS2 (Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-41
Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MSSIPIT--TTSFLRYQLLTTTLRSAPNVGECLFGLQK-RGSRVTAMATYKVKLITPSGV 60
           M+S+  T  +TSF+  +   T+L+  PNVGE LFGL+   G +VT MA+YKVKLITP G 
Sbjct: 1   MASVSATMISTSFMPRKPAVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGP 60

Query: 61  KEIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGW 120
            E  CPD+ YIL+ AE+ G DLPYSCRAG+CSSCAGK+  G VDQ++ +FLDDD + +GW
Sbjct: 61  IEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGW 120

Query: 121 VINCMAYPLSDVVIETHKEEE 139
           V+ C+AYP SDV IETHKE E
Sbjct: 121 VLTCVAYPQSDVTIETHKEAE 141

[Close]

BLAST of Cmc06g0161381 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-40
Identity = 77/117 (65.81%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 26  NVGECLFGLQKRGS--RVTAMATYKVKLITPSGVKEIKCPDDNYILNVAEDEGLDLPYSC 85
           NVG  LFGL+   S  RVTAMA YKV L+TP G +E++CPDD YIL+ AE+ G+DLPYSC
Sbjct: 31  NVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQELECPDDVYILDAAEEAGIDLPYSC 90

Query: 86  RAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVINCMAYPLSDVVIETHKEEEFT 141
           RAG+CSSCAGK+ SG V+Q + SFLDDD I +GWV+ C+AYP  DV IETHKEEE T
Sbjct: 91  RAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEELT 147

[Close]

BLAST of Cmc06g0161381 vs. ExPASy TrEMBL
Match: A0A5D3CLT7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00150 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.3e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60
           MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60

Query: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120
           KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN
Sbjct: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120

Query: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 150
           CMAYPLSDVVIETHKEEEFTNERTRRNSI
Sbjct: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 149

[Close]

BLAST of Cmc06g0161381 vs. ExPASy TrEMBL
Match: A0A5A7TC46 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00430 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60
           MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60

Query: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120
           KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSN+SFLDDD IAKGWVIN
Sbjct: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNISFLDDDQIAKGWVIN 120

Query: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 150
           CMAYPLSDVVIETHKEEEFTNERTRRNSI
Sbjct: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 149

[Close]

BLAST of Cmc06g0161381 vs. ExPASy TrEMBL
Match: A0A1S3C2Q0 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496218 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.9e-78
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60
           MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSGVKEI 60

Query: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVIN 120
           KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSN+SFLDDD IAKGWVIN
Sbjct: 61  KCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNISFLDDDQIAKGWVIN 120

Query: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 150
           CMAYPLSDVVIETHKEEEFTNERTRRNSI
Sbjct: 121 CMAYPLSDVVIETHKEEEFTNERTRRNSI 149

[Close]

BLAST of Cmc06g0161381 vs. ExPASy TrEMBL
Match: A0A7J6EFD8 (Ferredoxin OS=Cannabis sativa OX=3483 GN=F8388_003325 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.3e-48
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK--RGSRVTAMATYKVKLITPSGVK 60
           +SS  + +TSF+R Q   T+LR+ PNVG+ LFG  K  RG RVTAMA YKVKLITP G  
Sbjct: 11  LSSTTMMSTSFVRRQPTATSLRAVPNVGQSLFGGLKASRGGRVTAMAAYKVKLITPEGDS 70

Query: 61  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 120
           EI+CPDD Y+L+ AED G+DLPYSCRAGACSSC GK++ GKVDQS+ SFLDDD +A+GWV
Sbjct: 71  EIECPDDTYVLDQAEDAGIDLPYSCRAGACSSCIGKVVEGKVDQSDNSFLDDDQMAEGWV 130

Query: 121 INCMAYPLSDVVIETHKEEEF 140
           + C+AYPLSDVVIETHKEEEF
Sbjct: 131 LTCVAYPLSDVVIETHKEEEF 151

[Close]

BLAST of Cmc06g0161381 vs. ExPASy TrEMBL
Match: A0A7J6E1S1 (Transmembrane 9 superfamily member OS=Cannabis sativa OX=3483 GN=G4B88_029227 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.3e-48
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK--RGSRVTAMATYKVKLITPSGVK 60
           +SS  + +TSF+R Q   T+LR+ PNVG+ LFG  K  RG RVTAMA YKVKLITP G  
Sbjct: 788 LSSTTMMSTSFVRRQPTATSLRAVPNVGQSLFGGLKASRGGRVTAMAAYKVKLITPEGDS 847

Query: 61  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 120
           EI+CPDD Y+L+ AED G+DLPYSCRAGACSSC GK++ GKVDQS+ SFLDDD +A+GWV
Sbjct: 848 EIECPDDTYVLDQAEDAGIDLPYSCRAGACSSCIGKVVEGKVDQSDNSFLDDDQMAEGWV 907

Query: 121 INCMAYPLSDVVIETHKEEEF 140
           + C+AYPLSDVVIETHKEEEF
Sbjct: 908 LTCVAYPLSDVVIETHKEEEF 928

[Close]

BLAST of Cmc06g0161381 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-43
Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 0


Query: 3   SIPITTTSFLRYQLLTTTLRSAPNVG-ECLFGLQK---RGSRVTAMATYKVKLITPSGVK 62
           S  I +TSFLR Q    +LRS P    + LFGL+    RG RVTAMATYKVK ITP G +
Sbjct: 7   SSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQ 66

Query: 63  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 122
           E++C +D Y+L+ AE+ GLDLPYSCRAG+CSSCAGK++SG +DQS+ SFLDD+ +++G+V
Sbjct: 67  EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYV 126

Query: 123 INCMAYPLSDVVIETHKEE 138
           + C+AYP SDVVIETHKEE
Sbjct: 127 LTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of Cmc06g0161381 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-42
Identity = 84/140 (60.00%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 3   SIPITTTSFLRYQLLTTTLRSAPNVG-ECLFGLQK---RGSRVTAMATYKVKLITPSGVK 62
           S  I  TSF+R      +LRS P+   + LFGL+    RG RVTAMATYKVK ITP G  
Sbjct: 7   SSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEGEL 66

Query: 63  EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWV 122
           E++C DD Y+L+ AE+ G+DLPYSCRAG+CSSCAGK++SG VDQS+ SFLDD+ I +G+V
Sbjct: 67  EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFV 126

Query: 123 INCMAYPLSDVVIETHKEEE 139
           + C AYP SDV IETHKEE+
Sbjct: 127 LTCAAYPTSDVTIETHKEED 146

[Close]

BLAST of Cmc06g0161381 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 1   MSSIPITTTSFLRYQLLT-TTLRSAPNVGECL-FGLQKRGSR------------VTAMAT 60
           M+++ I++TS  +  L + TT +   N    L  G  KR SR             T  A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 61  YKVKLITPSGVK-EIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNV 120
           YKVKL+ P G + E +  DD YIL+ AE+ G+DLPYSCRAGACS+CAG+++SG VDQS+ 
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 121 SFLDDDHIAKGWVINCMAYPLSDVVIETHKEEE 139
           SFL+D H+ KG+V+ C+AYP SD VI THKE E
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETE 153

[Close]

BLAST of Cmc06g0161381 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 4   IPITTTSFLRYQLLTTTLRSAPNVGECLFGLQKRGSRVTAMATYKVKLITPSG-VKEIKC 63
           IP+ +        LTT L +    G  L   +    +V A  + KVKLI+P G  +EI+ 
Sbjct: 13  IPVISRISPSQAQLTTRLNNTTYFG--LSSSRGNFGKVFAKESRKVKLISPEGEEQEIEG 72

Query: 64  PDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNVSFLDDDHIAKGWVINCM 123
            +D  IL  AE+ GL+LPYSCR+G C +C GKL+SGKVDQS  SFL+++ I KG+++ C+
Sbjct: 73  NEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCI 132

Query: 124 AYPLSDVVIETHKEEE 139
           A PL D V+ THK+ +
Sbjct: 133 ALPLEDCVVYTHKQSD 146

[Close]

BLAST of Cmc06g0161381 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-15
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 40  RVTAMATYKVKLITPSGVKEIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGK 99
           R+ A A YKV +       E++   D  IL+ A D GLD+PY C  G C +C  KL++G 
Sbjct: 47  RIIARA-YKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGT 106

Query: 100 VDQSNVSFLDDDHIAKGWVINCMAYPLSDVVIETHKEEE 139
           VDQS    L DD + +G+ + C +YP SD  I+   EEE
Sbjct: 107 VDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEEE 143

The following BLAST results are available for this feature:

BLAST of Cmc06g0161381 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11179.1	1.3e-78	100.00	ferredoxin-like [Cucumis melo var. makuwa]	[more]
XP_008456215.1	1.4e-77	98.66	PREDICTED: ferredoxin-like [Cucumis melo] >KAA0038965.1 ferredoxin-like [Cucumis...	[more]
KAF4357178.1	6.9e-48	68.79	hypothetical protein F8388_003325 [Cannabis sativa] >KAF4366359.1 hypothetical p...	[more]
KAF4352271.1	6.9e-48	68.79	hypothetical protein G4B88_029227 [Cannabis sativa]	[more]
XP_030510336.1	6.9e-48	68.79	ferredoxin-like [Cannabis sativa]	[more]

BLAST of Cmc06g0161381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04090	3.5e-42	61.15	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
Q43517	2.9e-41	60.84	Ferredoxin-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SEND33 PE=2 SV=1	[more]
P16972	5.0e-41	60.00	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1	[more]
Q9ZTS2	6.5e-41	58.87	Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1	[more]
O04683	1.5e-40	65.81	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]

BLAST of Cmc06g0161381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLT7	6.3e-79	100.00	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00150 PE=...	[more]
A0A5A7TC46	6.9e-78	98.66	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00430 PE=3...	[more]
A0A1S3C2Q0	6.9e-78	98.66	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496218 PE=3 SV=1	[more]
A0A7J6EFD8	3.3e-48	68.79	Ferredoxin OS=Cannabis sativa OX=3483 GN=F8388_003325 PE=3 SV=1	[more]
A0A7J6E1S1	3.3e-48	68.79	Transmembrane 9 superfamily member OS=Cannabis sativa OX=3483 GN=G4B88_029227 PE...	[more]

BLAST of Cmc06g0161381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10960.1	2.5e-43	61.15	ferredoxin 1	[more]
AT1G60950.1	3.5e-42	60.00	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	1.8e-30	48.37	ferredoxin 3	[more]
AT5G10000.1	2.6e-24	44.12	ferredoxin 4	[more]
AT4G14890.1	8.2e-15	41.41	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 45..139 e-value: 9.0E-46 score: 151.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 54..125 e-value: 5.2E-15 score: 55.2
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 47..137 score: 12.17767
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 49..132 e-value: 4.3645E-27 score: 94.7692
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 44..148 e-value: 6.6E-35 score: 120.8
None	No IPR available	PANTHER	PTHR43112:SF17	FERREDOXIN-1, CHLOROPLASTIC	coord: 5..138
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 5..138
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 83..91
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 40..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0161381.1	Cmc06g0161381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0006124	ferredoxin metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0000139	Golgi membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding