Cmc06g0161191 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0161191
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr06: 9593303 .. 9594325 (-)
RNA-Seq Expression	Cmc06g0161191
Synteny	Cmc06g0161191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGACAAAGATATCCCAAAAACGGCTTTTCGCACTCATGAAGGTCATTACGAGTTTCTTGTTATGCCGTTTGGATTAACCAACGCCCCACCCACTTTTCAAGCCTTGATGAACAACATCTTTAGACCATTTTTTAGAAAATTTGTTTTGGTCTTCTTCGATGATATCCTGATCTACAGCAAGAATGAGAAAGACCACGTAGAACATATTGAAAAGGTTTTCCTCACATTGAGAAGACATGCCCTATTTGCCAATAAAAAAAAGTGTAATTTTGGCCAGAAGAAGATTGAATACTTGGGGCACATCATATCAGGGGAAGGAGTAGAAGTAGATTCTGAAAAAATCAAAGCAGTTGCGGATTGGCCATGCCCAACAAACATAAAAGAAGTACAGGGATTCCTTGGATTAACAGGCTATTATAGGAGGTTCGTCCAACATTATGGGTCAATAGCTGCCCCTTTAACTCAACTCCTCAAAAAGGGTGGGTTTAAATGGAATGAAGAATCTGAAAAAGCGTTTCTAAAATTGAAATCTGCAATGATGTCCCTACCAACATTGGCTTTACCCAACGTTGAACTTCCCTTTGAAATAGAAACAGATGCGTCCGGTTTTGGAGTGGGAGCCGTGTTAGTTCAGTCAAAGAGACCCATTGCCTTCTATAGCCATACATTTTCCATGAGAGATAGAGTTCGGCCTGTATACGAACGCGAGTTGATGGCTGTTGTACTATCCGTACAAAGATGGAGACCATATCTACTTAGGGCAAAATTTATTGTAAAAACAGATCAGAAATCACTAAAATTCTTGCTGGAGCAGAGGGTTATCCAACCACAATATAAAAAATGGCTATCTAAATTACTTGGATATTCGTTTGAAGTGGTTTATAAACTAGACTTAGAAAATAAGGCAGCCGATGCCTTATCGAGAAGACCTCCAAACATACAATTAAACACCATATCAGCCCCATATTTGGTGGATTTGCAAGTCATAAAGAAGAGGTGGAAAAAGATGAAAAGTTAA

mRNA sequence

ATGGTTGACAAAGATATCCCAAAAACGGCTTTTCGCACTCATGAAGGTCATTACGAGTTTCTTGTTATGCCGTTTGGATTAACCAACGCCCCACCCACTTTTCAAGCCTTGATGAACAACATCTTTAGACCATTTTTTAGAAAATTTGTTTTGGTCTTCTTCGATGATATCCTGATCTACAGCAAGAATGAGAAAGACCACGTAGAACATATTGAAAAGGTTTTCCTCACATTGAGAAGACATGCCCTATTTGCCAATAAAAAAAAGTGTAATTTTGGCCAGAAGAAGATTGAATACTTGGGGCACATCATATCAGGGGAAGGAGTAGAAGTAGATTCTGAAAAAATCAAAGCAGTTGCGGATTGGCCATGCCCAACAAACATAAAAGAAGTACAGGGATTCCTTGGATTAACAGGCTATTATAGGAGGTTCGTCCAACATTATGGGTCAATAGCTGCCCCTTTAACTCAACTCCTCAAAAAGGGTGGGTTTAAATGGAATGAAGAATCTGAAAAAGCGTTTCTAAAATTGAAATCTGCAATGATGTCCCTACCAACATTGGCTTTACCCAACGTTGAACTTCCCTTTGAAATAGAAACAGATGCGTCCGGTTTTGGAGTGGGAGCCGTGTTAGTTCAGTCAAAGAGACCCATTGCCTTCTATAGCCATACATTTTCCATGAGAGATAGAGTTCGGCCTGTATACGAACGCGAGTTGATGGCTGTTGTACTATCCGTACAAAGATGGAGACCATATCTACTTAGGGCAAAATTTATTGTAAAAACAGATCAGAAATCACTAAAATTCTTGCTGGAGCAGAGGGTTATCCAACCACAATATAAAAAATGGCTATCTAAATTACTTGGATATTCGTTTGAAGTGGTTTATAAACTAGACTTAGAAAATAAGGCAGCCGATGCCTTATCGAGAAGACCTCCAAACATACAATTAAACACCATATCAGCCCCATATTTGGTGGATTTGCAAGTCATAAAGAAGAGGTGGAAAAAGATGAAAAGTTAA

Coding sequence (CDS)

ATGGTTGACAAAGATATCCCAAAAACGGCTTTTCGCACTCATGAAGGTCATTACGAGTTTCTTGTTATGCCGTTTGGATTAACCAACGCCCCACCCACTTTTCAAGCCTTGATGAACAACATCTTTAGACCATTTTTTAGAAAATTTGTTTTGGTCTTCTTCGATGATATCCTGATCTACAGCAAGAATGAGAAAGACCACGTAGAACATATTGAAAAGGTTTTCCTCACATTGAGAAGACATGCCCTATTTGCCAATAAAAAAAAGTGTAATTTTGGCCAGAAGAAGATTGAATACTTGGGGCACATCATATCAGGGGAAGGAGTAGAAGTAGATTCTGAAAAAATCAAAGCAGTTGCGGATTGGCCATGCCCAACAAACATAAAAGAAGTACAGGGATTCCTTGGATTAACAGGCTATTATAGGAGGTTCGTCCAACATTATGGGTCAATAGCTGCCCCTTTAACTCAACTCCTCAAAAAGGGTGGGTTTAAATGGAATGAAGAATCTGAAAAAGCGTTTCTAAAATTGAAATCTGCAATGATGTCCCTACCAACATTGGCTTTACCCAACGTTGAACTTCCCTTTGAAATAGAAACAGATGCGTCCGGTTTTGGAGTGGGAGCCGTGTTAGTTCAGTCAAAGAGACCCATTGCCTTCTATAGCCATACATTTTCCATGAGAGATAGAGTTCGGCCTGTATACGAACGCGAGTTGATGGCTGTTGTACTATCCGTACAAAGATGGAGACCATATCTACTTAGGGCAAAATTTATTGTAAAAACAGATCAGAAATCACTAAAATTCTTGCTGGAGCAGAGGGTTATCCAACCACAATATAAAAAATGGCTATCTAAATTACTTGGATATTCGTTTGAAGTGGTTTATAAACTAGACTTAGAAAATAAGGCAGCCGATGCCTTATCGAGAAGACCTCCAAACATACAATTAAACACCATATCAGCCCCATATTTGGTGGATTTGCAAGTCATAAAGAAGAGGTGGAAAAAGATGAAAAGTTAA

Protein sequence

MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVADWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSAMMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELMAVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDLENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS

Homology

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BLAST of Cmc06g0161191 vs. NCBI nr
Match: TYK11209.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 688.0 bits (1774), Expect = 4.3e-194
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY
Sbjct: 121 MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 180

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA
Sbjct: 181 SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 240

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA
Sbjct: 241 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 300

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM
Sbjct: 301 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 360

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL
Sbjct: 361 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 420

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS 341
           ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS
Sbjct: 421 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS 460

[Close]

BLAST of Cmc06g0161191 vs. NCBI nr
Match: KAA0038941.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 686.0 bits (1769), Expect = 1.6e-193
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY
Sbjct: 121 MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 180

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA
Sbjct: 181 SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 240

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA
Sbjct: 241 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 300

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM
Sbjct: 301 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 360

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL
Sbjct: 361 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 420

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMK 340
           ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMK
Sbjct: 421 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMK 459

[Close]

BLAST of Cmc06g0161191 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 619.4 bits (1596), Expect = 1.9e-173
Identity = 300/337 (89.02%), Postives = 321/337 (95.25%), Query Frame = 0


Query: 1    MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
            M+DKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMN+IFRPF RKFVLVFFDDILIY
Sbjct: 738  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 797

Query: 61   SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
            SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQKK+EYLGHIISGEGVEVDSEKIKAVA
Sbjct: 798  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 857

Query: 121  DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
            DWPCPTNI+EV+GFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNE++E++F KLKSA
Sbjct: 858  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 917

Query: 181  MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
            MMSLPTLALPN  LPFEIETDASGFGVGAVL+QSKRPIAFYSHT SMRDR RPVYERELM
Sbjct: 918  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 977

Query: 241  AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
            AVVLSVQRWRPYLL AKF+VKTDQKSLKFLLEQRVIQPQY+KWLSKLLGYSFEVVYK  L
Sbjct: 978  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 1037

Query: 301  ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKK 338
            ENKAADALSRRPP+IQLN+IS PY +DL+ IK+  +K
Sbjct: 1038 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEK 1074

[Close]

BLAST of Cmc06g0161191 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 617.8 bits (1592), Expect = 5.4e-173
Identity = 299/337 (88.72%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M+DKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMN+IFRPF RKFVLVFFDDILIY
Sbjct: 648 MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMNSIFRPFLRKFVLVFFDDILIY 707

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQKK+EYLGHIISGEGVEVDSEKIK VA
Sbjct: 708 SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKVVA 767

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNI+EV+GFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNE++E++F KLKSA
Sbjct: 768 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 827

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPN  LPFEIETDASGFGVGAVL+QSKRPIAFYSHT SMRDR RPVYERELM
Sbjct: 828 MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 887

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLL AKF+VKTDQKSLKFLLEQRVIQPQY+KWLSKLLGYSFEVVYK  L
Sbjct: 888 AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 947

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKK 338
           ENKAADALSRRPP+IQLN+IS PY +DL+ IK+  +K
Sbjct: 948 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEK 984

[Close]

BLAST of Cmc06g0161191 vs. NCBI nr
Match: KAA0062279.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa] >TYK26707.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 617.8 bits (1592), Expect = 5.4e-173
Identity = 298/337 (88.43%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M+DKDIPKTAFR HEGHYEFLV+PFGLTNAP TFQALMN+IFRPF RKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRIHEGHYEFLVLPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDH+EHIEKVFL LR+H LFANKKKCNFGQKK+EYLGHI+SGEGVEVDSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHTLFANKKKCNFGQKKVEYLGHIVSGEGVEVDSEKIKAVA 120

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNI+EVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNE++E++F KLKSA
Sbjct: 121 DWPCPTNIREVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPN  LPFEIETDASGFGVGAVL+QSKRPIAFYSHT SMRDR RPVYER+LM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERKLM 240

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLL AKF+VKTDQKSLKFLLEQRVIQPQY+KWLSKLLGYSFEVVYK  L
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKK 338
           ENKAADALSRRPP+IQLN+IS PYL+DL+ IK+  +K
Sbjct: 301 ENKAADALSRRPPDIQLNSISVPYLMDLETIKEEVEK 337

[Close]

BLAST of Cmc06g0161191 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.6e-64
Identity = 130/312 (41.67%), Postives = 191/312 (61.22%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M ++ I KTAF T  GHYE+L MPFGL NAP TFQ  MNNI RP   K  LV+ DDI+I+
Sbjct: 311 MDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIF 370

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           S +  +H+  I+ VF  L    L     KC F +K+  +LGHI++ +G++ +  K+KA+ 
Sbjct: 371 STSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIV 430

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESE--KAFLKLK 180
            +P PT  KE++ FLGLTGYYR+F+ +Y  IA P+T  LKK      ++ E  +AF KLK
Sbjct: 431 SYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLK 490

Query: 181 SAMMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERE 240
           + ++  P L LP+ E  F + TDAS   +GAVL Q+  PI+F S T +  +      E+E
Sbjct: 491 ALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKE 550

Query: 241 LMAVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKL 300
           L+A+V + + +R YLL  +F++ +D + L++L   +    + ++W  +L  Y F++ Y  
Sbjct: 551 LLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIK 610

Query: 301 DLENKAADALSR 311
             EN  ADALSR
Sbjct: 611 GKENSVADALSR 622

[Close]

BLAST of Cmc06g0161191 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-59
Identity = 121/312 (38.78%), Postives = 184/312 (58.97%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M  + + KTAF T  GHYE+L MPFGL NAP TFQ  MN+I RP   K  LV+ DDI+++
Sbjct: 312 MDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVF 371

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           S +  +H++ +  VF  L +  L     KC F +++  +LGH+++ +G++ + EKI+A+ 
Sbjct: 372 STSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGG--FKWNEESEKAFLKLK 180
            +P PT  KE++ FLGLTGYYR+F+ ++  IA P+T+ LKK       N E + AF KLK
Sbjct: 432 KYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLK 491

Query: 181 SAMMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERE 240
             +   P L +P+    F + TDAS   +GAVL Q   P+++ S T +  +      E+E
Sbjct: 492 YLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKE 551

Query: 241 LMAVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKL 300
           L+A+V + + +R YLL   F + +D + L +L   +    +  +W  KL  + F++ Y  
Sbjct: 552 LLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIK 611

Query: 301 DLENKAADALSR 311
             EN  ADALSR
Sbjct: 612 GKENCVADALSR 623

[Close]

BLAST of Cmc06g0161191 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-59
Identity = 127/338 (37.57%), Postives = 198/338 (58.58%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M + DIPKTAF T  G YEFL +PFGL NAP  FQ ++++I R    K   V+ DDI+++
Sbjct: 228 MKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVF 287

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           S++   H +++  V  +L +  L  N +K +F   ++E+LG+I++ +G++ D +K++A++
Sbjct: 288 SEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAIS 347

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLK------------KGGFKWNE 180
           + P PT++KE++ FLG+T YYR+F+Q Y  +A PLT L +            K     +E
Sbjct: 348 EMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDE 407

Query: 181 ESEKAFLKLKSAMMSLPTLALPNVELPFEIETDASGFGVGAVLVQS----KRPIAFYSHT 240
            + ++F  LKS + S   LA P    PF + TDAS + +GAVL Q      RPIA+ S +
Sbjct: 408 TALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRS 467

Query: 241 FSMRDRVRPVYERELMAVVLSVQRWRPYLLRAKFI-VKTDQKSLKFLLEQRVIQPQYKKW 300
            +  +      E+E++A++ S+   R YL  A  I V TD + L F L  R    + K+W
Sbjct: 468 LNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRW 527

Query: 301 LSKLLGYSFEVVYKLDLENKAADALSRRPPNIQLNTIS 322
            +++  Y+ E++YK    N  ADALSR PP  QLN +S
Sbjct: 528 KARIEEYNCELIYKPGKSNVVADALSRIPP--QLNQLS 563

[Close]

BLAST of Cmc06g0161191 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 9.9e-53
Identity = 118/332 (35.54%), Postives = 188/332 (56.63%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           + + D  KT+F  + G YEF  +PFGL NA   FQ  ++++ R    K   V+ DD++I+
Sbjct: 287 LAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIF 346

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           S+NE DHV HI+ V   L    +  +++K  F ++ +EYLG I+S +G + D EK+KA+ 
Sbjct: 347 SENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQ 406

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLL------------KKGGFKWNE 180
           ++P P  + +V+ FLGL  YYR F++ + +IA P+T +L            KK   ++NE
Sbjct: 407 EYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNE 466

Query: 181 ESEKAFLKLKSAMMSLPT-LALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSM 240
               AF +L++ + S    L  P+ + PF++ TDAS  G+GAVL Q  RPI   S T   
Sbjct: 467 TQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQ 526

Query: 241 RDRVRPVYERELMAVVLSVQRWRPYLLRAKFI-VKTDQKSLKFLLEQRVIQPQYKKWLSK 300
            ++     EREL+A+V ++ + + +L  ++ I + TD + L F +  R    + K+W S 
Sbjct: 527 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSY 586

Query: 301 LLGYSFEVVYKLDLENKAADALSRRPPNIQLN 319
           +  ++ +V YK   EN  ADALSR+  N   N
Sbjct: 587 IDQHNAKVFYKPGKENFVADALSRQNLNALQN 618

[Close]

BLAST of Cmc06g0161191 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-49
Identity = 117/317 (36.91%), Postives = 176/317 (55.52%), Query Frame = 0


Query: 1    MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
            M  KD  KTAF T  G YE+ VMPFGL NAP TF   M + FR    +FV V+ DDILI+
Sbjct: 722  MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 781

Query: 61   SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
            S++ ++H +H++ V   L+   L   KKKC F  ++ E+LG+ I  + +     K  A+ 
Sbjct: 782  SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 841

Query: 121  DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
            D+P P  +K+ Q FLG+  YYRRF+ +   IA P+ QL      +W E+ +KA  KLK+A
Sbjct: 842  DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIEKLKAA 901

Query: 181  MMSLPTLALPNVELPFEIETDASGFGVGAVL--VQSKRP----IAFYSHTFSMRDRVRPV 240
            + + P L   N +  + + TDAS  G+GAVL  V +K      + ++S +     +  P 
Sbjct: 902  LCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPA 961

Query: 241  YERELMAVVLSVQRWRPYLLRAK-FIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFE 300
             E EL+ ++ ++  +R Y+L  K F ++TD  SL  L  +     + ++WL  L  Y F 
Sbjct: 962  GELELLGIIKALHHFR-YMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFT 1021

Query: 301  VVYKLDLENKAADALSR 311
            + Y    +N  ADA+SR
Sbjct: 1022 LEYLAGPKNVVADAISR 1034

[Close]

BLAST of Cmc06g0161191 vs. ExPASy TrEMBL
Match: A0A5D3CLW4 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00530 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.1e-194
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY
Sbjct: 121 MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 180

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA
Sbjct: 181 SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 240

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA
Sbjct: 241 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 300

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM
Sbjct: 301 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 360

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL
Sbjct: 361 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 420

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS 341
           ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS
Sbjct: 421 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMKS 460

[Close]

BLAST of Cmc06g0161191 vs. ExPASy TrEMBL
Match: A0A5A7TBE6 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00130 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 7.8e-194
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY
Sbjct: 121 MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 180

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA
Sbjct: 181 SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 240

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA
Sbjct: 241 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 300

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM
Sbjct: 301 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 360

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL
Sbjct: 361 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 420

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMK 340
           ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMK
Sbjct: 421 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKKMK 459

[Close]

BLAST of Cmc06g0161191 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 9.0e-174
Identity = 300/337 (89.02%), Postives = 321/337 (95.25%), Query Frame = 0


Query: 1    MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
            M+DKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMN+IFRPF RKFVLVFFDDILIY
Sbjct: 738  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 797

Query: 61   SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
            SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQKK+EYLGHIISGEGVEVDSEKIKAVA
Sbjct: 798  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 857

Query: 121  DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
            DWPCPTNI+EV+GFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNE++E++F KLKSA
Sbjct: 858  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 917

Query: 181  MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
            MMSLPTLALPN  LPFEIETDASGFGVGAVL+QSKRPIAFYSHT SMRDR RPVYERELM
Sbjct: 918  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 977

Query: 241  AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
            AVVLSVQRWRPYLL AKF+VKTDQKSLKFLLEQRVIQPQY+KWLSKLLGYSFEVVYK  L
Sbjct: 978  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 1037

Query: 301  ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKK 338
            ENKAADALSRRPP+IQLN+IS PY +DL+ IK+  +K
Sbjct: 1038 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEK 1074

[Close]

BLAST of Cmc06g0161191 vs. ExPASy TrEMBL
Match: A0A5A7V9B4 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003690 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.6e-173
Identity = 298/337 (88.43%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M+DKDIPKTAFR HEGHYEFLV+PFGLTNAP TFQALMN+IFRPF RKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRIHEGHYEFLVLPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDH+EHIEKVFL LR+H LFANKKKCNFGQKK+EYLGHI+SGEGVEVDSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHTLFANKKKCNFGQKKVEYLGHIVSGEGVEVDSEKIKAVA 120

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNI+EVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNE++E++F KLKSA
Sbjct: 121 DWPCPTNIREVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPN  LPFEIETDASGFGVGAVL+QSKRPIAFYSHT SMRDR RPVYER+LM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERKLM 240

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLL AKF+VKTDQKSLKFLLEQRVIQPQY+KWLSKLLGYSFEVVYK  L
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKK 338
           ENKAADALSRRPP+IQLN+IS PYL+DL+ IK+  +K
Sbjct: 301 ENKAADALSRRPPDIQLNSISVPYLMDLETIKEEVEK 337

[Close]

BLAST of Cmc06g0161191 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.6e-173
Identity = 299/337 (88.72%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 1   MVDKDIPKTAFRTHEGHYEFLVMPFGLTNAPPTFQALMNNIFRPFFRKFVLVFFDDILIY 60
           M+DKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMN+IFRPF RKFVLVFFDDILIY
Sbjct: 648 MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMNSIFRPFLRKFVLVFFDDILIY 707

Query: 61  SKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLGHIISGEGVEVDSEKIKAVA 120
           SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQKK+EYLGHIISGEGVEVDSEKIK VA
Sbjct: 708 SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKVVA 767

Query: 121 DWPCPTNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSA 180
           DWPCPTNI+EV+GFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNE++E++F KLKSA
Sbjct: 768 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 827

Query: 181 MMSLPTLALPNVELPFEIETDASGFGVGAVLVQSKRPIAFYSHTFSMRDRVRPVYERELM 240
           MMSLPTLALPN  LPFEIETDASGFGVGAVL+QSKRPIAFYSHT SMRDR RPVYERELM
Sbjct: 828 MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 887

Query: 241 AVVLSVQRWRPYLLRAKFIVKTDQKSLKFLLEQRVIQPQYKKWLSKLLGYSFEVVYKLDL 300
           AVVLSVQRWRPYLL AKF+VKTDQKSLKFLLEQRVIQPQY+KWLSKLLGYSFEVVYK  L
Sbjct: 888 AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 947

Query: 301 ENKAADALSRRPPNIQLNTISAPYLVDLQVIKKRWKK 338
           ENKAADALSRRPP+IQLN+IS PY +DL+ IK+  +K
Sbjct: 948 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEK 984

[Close]

BLAST of Cmc06g0161191 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-36
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 68  VEHIEKVFLTLRRHALFANKKKCNFGQKKIEYLG--HIISGEGVEVDSEKIKAVADWPCP 127
           + H+  V     +H  +AN+KKC FGQ +I YLG  HIISGEGV  D  K++A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 128 TNIKEVQGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEESEKAFLKLKSAMMSLP 187
            N  E++GFLGLTGYYRRFV++YG I  PLT+LLKK   KW E +  AF  LK A+ +LP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 188 TLALPNVELPF 197
            LALP+++LPF
Sbjct: 121 VLALPDLKLPF 131

The following BLAST results are available for this feature:

BLAST of Cmc06g0161191 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11209.1	4.3e-194	100.00	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]	[more]
KAA0038941.1	1.6e-193	100.00	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
TYK02195.1	1.9e-173	89.02	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23779.1	5.4e-173	88.72	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062279.1	5.4e-173	88.43	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa] >TYK26707.1 Transposon T...	[more]

BLAST of Cmc06g0161191 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	5.6e-64	41.67	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.1e-59	38.78	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	2.4e-59	37.57	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10401	9.9e-53	35.54	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q7LHG5	2.3e-49	36.91	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc06g0161191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLW4	2.1e-194	100.00	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7TBE6	7.8e-194	100.00	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3BSP2	9.0e-174	89.02	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V9B4	2.6e-173	88.43	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3DKH5	2.6e-173	88.72	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc06g0161191 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.3e-36	54.20	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 30..104 e-value: 4.7E-40 score: 139.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 113..195 e-value: 2.7E-29 score: 103.0
None	No IPR available	GENE3D	3.10.20.370		coord: 196..262 e-value: 1.5E-6 score: 30.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..29 e-value: 4.7E-40 score: 139.2
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 1..312
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 197..312 e-value: 5.43407E-44 score: 145.328
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..104 e-value: 1.6983E-50 score: 164.306
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 166..260 e-value: 6.8E-29 score: 99.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 13..104 e-value: 7.0E-20 score: 71.5
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..104 score: 14.656335
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0161191.1	Cmc06g0161191.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004601	peroxidase activity