Cmc06g0160871 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0160871
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr06: 9205458 .. 9206296 (+)
RNA-Seq Expression	Cmc06g0160871
Synteny	Cmc06g0160871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATGATAATAAGAAGAAGAATTACCTTGGCCAAAGGGCATGGACAAGAAGAGGAGGGAGCGAGATTCACGAGAGTCATGAAAAACAACGGTGGAAGAAGGATACCCAACCGGCGGCTCTCGGAAATCCTCATCCGTCAAAGGATGATCAAGGCTCACCCTCCTACCAGGGAACACAGTAACAGCAACGGAAGCGGCACTGACAACAGTAAAACAAATGGATCTGATCTGCAAGGGAGCGGTGATGTCGGGAATCCAATGGGCGAAATCGAAGAAGACGAAATCGGGGCGGAGGGAGTGGATAATGCGATGGACCTGAGGACGAGTGAGATCGAAGGCAGAGGCAAGAAGAGGAGTGAGAGAGAGAGGGATATCGGAGGCGGAATGGGCGGCGGGGGGGAGGCCGGGGACGGAGGGAAGAGATAAGAAATGGAAGGAGATGAGATTAGGGTAAAGATTGAGAGAATGGAAAAGGGGGGAAGGGTTGTTGGGTAAAAGGAAAGTGATTCGATGGTTTTTGGAAGCGAGGTGGTTGGAGATGTGGAGAAATGGAGTAATGTGGCCAGTTGCAAACCATGGGAACATTAGAATGTGGAGGCTTTGGGTTTCCCCGCCTGATCTTACCATTTTTTACTTTTAGGTTTTGATCAATGTAGTTGTAATTGTGGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGGGGATGGGACATTCCGTTTGTTTTTCCTAATCCTTTGCTCCTTCCTCACTGGATCTCTTCACCTAATTAATTATTATTATTATTATTATTATTATTGTTATTATTATTATTATTGTTTATTATGATGTAGG

mRNA sequence

GATATGATAATAAGAAGAAGAATTACCTTGGCCAAAGGGCATGGACAAGAAGAGGAGGGAGCGAGATTCACGAGAGTCATGAAAAACAACGGTGGAAGAAGGATACCCAACCGGCGGCTCTCGGAAATCCTCATCCGTCAAAGGATGATCAAGGCTCACCCTCCTACCAGGGAACACAGTAACAGCAACGGAAGCGGCACTGACAACAGTAAAACAAATGGATCTGATCTGCAAGGGAGCGGTGATGTCGGGAATCCAATGGGCGAAATCGAAGAAGACGAAATCGGGGCGGAGGGAGTGGATAATGCGATGGACCTGAGGACGAGTGAGATCGAAGGCAGAGGCAAGAAGAGGAGTGAGAGAGAGAGGGATATCGGAGGCGGAATGGGCGGCGGGGGGGAGGCCGGGGACGGAGGGAAGAGATAAGAAATGGAAGGAGATGAGATTAGGGTAAAGATTGAGAGAATGGAAAAGGGGGGAAGGGTTGTTGGGTAAAAGGAAAGTGATTCGATGGTTTTTGGAAGCGAGGTGGTTGGAGATGTGGAGAAATGGAGTAATGTGGCCAGTTGCAAACCATGGGAACATTAGAATGTGGAGGCTTTGGTTGTAATTGTGGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATGGGGATGGGACATTCCGTTTGTTTTTCCTAATCCTTTGCTCCTTCCTCACTGGATCTCTTCACCTAATTAATTATTATTATTATTATTATTATTATTGTTATTATTATTATTATTGTTTATTATGATGTAGG

Coding sequence (CDS)

ATGATAATAAGAAGAAGAATTACCTTGGCCAAAGGGCATGGACAAGAAGAGGAGGGAGCGAGATTCACGAGAGTCATGAAAAACAACGGTGGAAGAAGGATACCCAACCGGCGGCTCTCGGAAATCCTCATCCGTCAAAGGATGATCAAGGCTCACCCTCCTACCAGGGAACACAGTAACAGCAACGGAAGCGGCACTGACAACAGTAAAACAAATGGATCTGATCTGCAAGGGAGCGGTGATGTCGGGAATCCAATGGGCGAAATCGAAGAAGACGAAATCGGGGCGGAGGGAGTGGATAATGCGATGGACCTGAGGACGAGTGAGATCGAAGGCAGAGGCAAGAAGAGGAGTGAGAGAGAGAGGGATATCGGAGGCGGAATGGGCGGCGGGGGGGAGGCCGGGGACGGAGGGAAGAGATAA

Protein sequence

MIIRRRITLAKGHGQEEEGARFTRVMKNNGGRRIPNRRLSEILIRQRMIKAHPPTREHSNSNGSGTDNSKTNGSDLQGSGDVGNPMGEIEEDEIGAEGVDNAMDLRTSEIEGRGKKRSERERDIGGGMGGGGEAGDGGKR

Homology

The following BLAST results are available for this feature:

BLAST of Cmc06g0160871 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc06g0160871 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc06g0160871 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc06g0160871 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0160871.1	Cmc06g0160871.1	mRNA