Cmc06g0160851 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATATATATATATATATATATATATATATATACATATTGTGGGTGGAGATCAAAAGACAGCGCATGTTACACAATCTCACATGGCCTTCTCCTCTCCTCATCATCCTAATCATATAATGGCGTTTTCCGAAGAAATCTTGATGGCCACTCCATTTCCCAGGTACCCATTTCCTCAAATTCTCCCTCTTTCTTCCCTTTTGGTCAAATCTCTTCACTCCCCATGGACCCAATCAATCCCTCTCTTCATCAATCTTCTCCTTCAAGCGATGCTCCGCTCATTGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGACAATCTTCTTCTTAGGAGGAACCCCAGGATGTTGATCTCCCGCTCTGATCCCTGTCTTTCTAAACTTCCCCACCAGGTGTTTGTTGAAACTCCTCCTACTAATCTCCGCTCACCTGCTTTGGATGCTGGTGTTTCCCTCCAGAATAATGGTGATGGTGTTGTACGTCGGAATCTGCTTCGAACGCCGTCCTTACCCTCCCGTATGTATCGTGGTCAGGGAATTCGAGAGGAAGGAAATGGTTCTAGGCCGTTGGTGGAACATTGTGTGCTTCTTGAAACTCCTGTTGATAATGTTTGCTCATCTTCTTTGGATATGGATGTTTCGAGTGGAAATCCTGCTGGCAAATGTAGGAATCTCCTCCGAACTCCATCGTTACCGCCCCGTGTGGAACAAGGGGAAGGAATTAAAGAGAAAGTAAATGACGCTGGGCCATTATCTGAGCATGGTGTGTTTGCAGAACGTCCTGCTGATAATGCCTGCTTATCTACTTTGGATATGGGTTTTTCACCGGGAAATAGTGGAGATAAACGTCGGAGTCTTCGCCGAATTCCGTCATTACCATCCCGTGTGGAACGAGAACAAGGCATTCAAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGGTTTGCTTCAAAAACCAGCCAAACCACCTTATGTTGAGAGGAAAGAAGAAGGAACTCGGTGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACCGCAGAGTAATCTGCTGAGAACACCATCCTTGCCACCATGTATAGGGAGGGAAAAGGAATTTGGAGAAAGGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTCCCCACCAGACAAGAGGTATTGAAATATTATTGTTCTGTTTCAACTGTCTCCTAACATTCTTCATGTGTGCTTGAATGACATTCGAGCTCGCTTACGGTTAAGAGTAAGCACATCAAATCGAGAGTACAATAAGAAGATTAAACTATCTTGAAGGTATTTTAATATAGTATCATAGCAAGAAGTCTTAAATTCCTACATTTTGAATGAATCCATATGTTGAGCTGTTTGCTAATGTTTGAGTCTTGATGTGATTGTGAAAAGATGACATTCATGTTGGCCCAGTGATAATGCTTGGGTTGCTGAGAGCGACCCTCCAAAGTCCTAAATTCGAGTTGAAATACCGGGTGTTGGATAATCGAAGTTTCTTAAAATTATTAAGATAAAGCATGAGCATAAATTTTTATCCAAAAAGAAAAAGAAACATGAGCATAATGTAAGGAGTGGAACCTTGGGAATTCCACTTATCAAAAGAACCGGTTTTACTTGATAACTTAAAATTGTTGTGAATAGCAATTTAGCAACTTAGTGAAGTTCAATTGGATTCTCATGTGAATAAACTTCAGAAATGTTGGTGGTCTTAAATGAGTTAATAAACACAACACGTTATAAGATAGAACCACTAGAATAAGTTCCATCTGTTATTTGCTTCTTTTAATAACATTTGGTGTGCTCATCATTCACAACAGATTCTTGAAAAGAACTTCAGCCTCCCAATGTGTCGAATCCCGACAAGCAGTGACGAAGTGTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGAAGCCAAAGTGAATTAGAATCAGAAGAAGTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATTCCAGGATTAAGAGAGAAAAAAGAGGAAGAATTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAAGCTTGGATGCTCCAAACTCATCTCCTTCCTCCAATTCCAAAATGGGACACTAGAAAATCAGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAATTGGTGAGGGAACCCATAAACATACCATATTAAGGAAAATTTGCATAGGTTGCCCCAATTTCAAAGCAAAGAAAAAAACTAATTTTGTAATATTTTGTCTTTAATAAGCTAAGTCTGTTTGTGCAGCTACACAAGACTCAAGGGAATTGGATTGGAGTCCAAATGAATCTCACTTTATTGGAGAAAGTAGGGTAAAAGGTGAGGGACAGACATTTGAATGAGCTTTGAGAAGAACACAGTATACAACTTTGTCACCTTTCACCACCAAACAGAGAGAAAAATGCCATCATTCCCTATTCGAATCTTCAAAAAGTTTTACTTCAAAATTTGAGCAGGTTGTTGCATTGGAGACTGGGCCAATTCAACCTCTTCCATTCATAGAAAAAAAAAAGGGAAATGGGTGACAATTGAAATGTGGCAGCTAGAACCAAGAACAAATGTATTTGGTACAAGAGAATAAGATGAGCAACAGGAGAGTTATTTATTTATTATATAAAATTTTGTTATATCTTTTCATAAATTGATTAATCATTTAAAGTTCAACTAATTATTTTTTCCACTGGAGATGTATATTTTAAATTCTCTAGTTGTAGAAACAGTTTTATTTATTTCAAATTTAACCTATTTATAA AATATATATATATATATATATATATATATATACATATTGTGGGTGGAGATCAAAAGACAGCGCATGTTACACAATCTCACATGGCCTTCTCCTCTCCTCATCATCCTAATCATATAATGGCGTTTTCCGAAGAAATCTTGATGGCCACTCCATTTCCCAGGTACCCATTTCCTCAAATTCTCCCTCTTTCTTCCCTTTTGGTCAAATCTCTTCACTCCCCATGGACCCAATCAATCCCTCTCTTCATCAATCTTCTCCTTCAAGCGATGCTCCGCTCATTGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGACAATCTTCTTCTTAGGAGGAACCCCAGGATGTTGATCTCCCGCTCTGATCCCTGTCTTTCTAAACTTCCCCACCAGGTGTTTGTTGAAACTCCTCCTACTAATCTCCGCTCACCTGCTTTGGATGCTGGTGTTTCCCTCCAGAATAATGGTGATGGTGTTGTACGTCGGAATCTGCTTCGAACGCCGTCCTTACCCTCCCGTATGTATCGTGGTCAGGGAATTCGAGAGGAAGGAAATGGTTCTAGGCCGTTGGTGGAACATTGTGTGCTTCTTGAAACTCCTGTTGATAATGTTTGCTCATCTTCTTTGGATATGGATGTTTCGAGTGGAAATCCTGCTGGCAAATGTAGGAATCTCCTCCGAACTCCATCGTTACCGCCCCGTGTGGAACAAGGGGAAGGAATTAAAGAGAAAGTAAATGACGCTGGGCCATTATCTGAGCATGGTGTGTTTGCAGAACGTCCTGCTGATAATGCCTGCTTATCTACTTTGGATATGGGTTTTTCACCGGGAAATAGTGGAGATAAACGTCGGAGTCTTCGCCGAATTCCGTCATTACCATCCCGTGTGGAACGAGAACAAGGCATTCAAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGGTTTGCTTCAAAAACCAGCCAAACCACCTTATGTTGAGAGGAAAGAAGAAGGAACTCGGTGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACCGCAGAGTAATCTGCTGAGAACACCATCCTTGCCACCATGTATAGGGAGGGAAAAGGAATTTGGAGAAAGGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTCCCCACCAGACAAGAGATTCTTGAAAAGAACTTCAGCCTCCCAATGTGTCGAATCCCGACAAGCAGTGACGAAGTGTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGAAGCCAAAGTGAATTAGAATCAGAAGAAGTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATTCCAGGATTAAGAGAGAAAAAAGAGGAAGAATTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAAGCTTGGATGCTCCAAACTCATCTCCTTCCTCCAATTCCAAAATGGGACACTAGAAAATCAGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAAAATTGCTACACAAGACTCAAGGGAATTGGATTGGAGTCCAAATGAATCTCACTTTATTGGAGAAAGTAGGGTAAAAGGTGAGGGACAGACATTTGAATGAGCTTTGAGAAGAACACAGTATACAACTTTGTCACCTTTCACCACCAAACAGAGAGAAAAATGCCATCATTCCCTATTCGAATCTTCAAAAAGTTTTACTTCAAAATTTGAGCAGGTTGTTGCATTGGAGACTGGGCCAATTCAACCTCTTCCATTCATAGAAAAAAAAAAGGGAAATGGGTGACAATTGAAATGTGGCAGCTAGAACCAAGAACAAATGTATTTGGTACAAGAGAATAAGATGAGCAACAGGAGAGTTATTTATTTATTATATAAAATTTTGTTATATCTTTTCATAAATTGATTAATCATTTAAAGTTCAACTAATTATTTTTTCCACTGGAGATGTATATTTTAAATTCTCTAGTTGTAGAAACAGTTTTATTTATTTCAAATTTAACCTATTTATAA ATGGACCCAATCAATCCCTCTCTTCATCAATCTTCTCCTTCAAGCGATGCTCCGCTCATTGATGAAGCTTTGGATCTTTTAGAGCTTTTTTGGTTCTTTGACAATCTTCTTCTTAGGAGGAACCCCAGGATGTTGATCTCCCGCTCTGATCCCTGTCTTTCTAAACTTCCCCACCAGGTGTTTGTTGAAACTCCTCCTACTAATCTCCGCTCACCTGCTTTGGATGCTGGTGTTTCCCTCCAGAATAATGGTGATGGTGTTGTACGTCGGAATCTGCTTCGAACGCCGTCCTTACCCTCCCGTATGTATCGTGGTCAGGGAATTCGAGAGGAAGGAAATGGTTCTAGGCCGTTGGTGGAACATTGTGTGCTTCTTGAAACTCCTGTTGATAATGTTTGCTCATCTTCTTTGGATATGGATGTTTCGAGTGGAAATCCTGCTGGCAAATGTAGGAATCTCCTCCGAACTCCATCGTTACCGCCCCGTGTGGAACAAGGGGAAGGAATTAAAGAGAAAGTAAATGACGCTGGGCCATTATCTGAGCATGGTGTGTTTGCAGAACGTCCTGCTGATAATGCCTGCTTATCTACTTTGGATATGGGTTTTTCACCGGGAAATAGTGGAGATAAACGTCGGAGTCTTCGCCGAATTCCGTCATTACCATCCCGTGTGGAACGAGAACAAGGCATTCAAGAGAAAGGGAATGGTTCCAAGCCATTAATAGAGCATGGTTTGCTTCAAAAACCAGCCAAACCACCTTATGTTGAGAGGAAAGAAGAAGGAACTCGGTGCAAAGAAAGTGGCAGCACTCGGAGGAGCAAATCGGCGAGGAAACCACCGCAGAGTAATCTGCTGAGAACACCATCCTTGCCACCATGTATAGGGAGGGAAAAGGAATTTGGAGAAAGGGAAGCTGCTGCTAGAATCAGAAACTCTATTCAACCAAACCTTTCTGAATTCTTCCCCACCAGACAAGAGATTCTTGAAAAGAACTTCAGCCTCCCAATGTGTCGAATCCCGACAAGCAGTGACGAAGTGTGGCACCAATTTCTCATCCAAATGAGGAAGAGAAGAAGCCAAAGTGAATTAGAATCAGAAGAAGTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATATAAACCCAACAGTGGTTGACATAATTCCAGGATTAAGAGAGAAAAAAGAGGAAGAATTGGAGAGTGAAAGAACTAGAAGGCCTTATCTTTCTGAAGCTTGGATGCTCCAAACTCATCTCCTTCCTCCAATTCCAAAATGGGACACTAGAAAATCAGCAGAAGACATGAAACAACAAATCAAGTTTTGGGCTAGAGCTGTTGCTTCTAATGTGCACTAA MDPINPSLHQSSPSSDAPLIDEALDLLELFWFFDNLLLRRNPRMLISRSDPCLSKLPHQVFVETPPTNLRSPALDAGVSLQNNGDGVVRRNLLRTPSLPSRMYRGQGIREEGNGSRPLVEHCVLLETPVDNVCSSSLDMDVSSGNPAGKCRNLLRTPSLPPRVEQGEGIKEKVNDAGPLSEHGVFAERPADNACLSTLDMGFSPGNSGDKRRSLRRIPSLPSRVEREQGIQEKGNGSKPLIEHGLLQKPAKPPYVERKEEGTRCKESGSTRRSKSARKPPQSNLLRTPSLPPCIGREKEFGEREAAARIRNSIQPNLSEFFPTRQEILEKNFSLPMCRIPTSSDEVWHQFLIQMRKRRSQSELESEEVQGFKDLGFTFDKKDINPTVVDIIPGLREKKEEELESERTRRPYLSEAWMLQTHLLPPIPKWDTRKSAEDMKQQIKFWARAVASNVH Homology
BLAST of Cmc06g0160851 vs. NCBI nr
Match: TYK11252.1 (uncharacterized protein E5676_scaffold227G001080 [Cucumis melo var. makuwa]) HSP 1 Score: 914.8 bits (2363), Expect = 2.9e-262 Identity = 453/454 (99.78%), Postives = 454/454 (100.00%), Query Frame = 0
BLAST of Cmc06g0160851 vs. NCBI nr
Match: KAA0058836.1 (DUF3082 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 914.8 bits (2363), Expect = 2.9e-262 Identity = 453/454 (99.78%), Postives = 454/454 (100.00%), Query Frame = 0
BLAST of Cmc06g0160851 vs. NCBI nr
Match: XP_031739166.1 (uncharacterized protein LOC101221005 [Cucumis sativus]) HSP 1 Score: 782.7 bits (2020), Expect = 1.7e-222 Identity = 401/454 (88.33%), Postives = 414/454 (91.19%), Query Frame = 0
BLAST of Cmc06g0160851 vs. NCBI nr
Match: KGN57636.1 (hypothetical protein Csa_010290 [Cucumis sativus]) HSP 1 Score: 782.7 bits (2020), Expect = 1.7e-222 Identity = 401/454 (88.33%), Postives = 414/454 (91.19%), Query Frame = 0
BLAST of Cmc06g0160851 vs. NCBI nr
Match: XP_016901888.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo]) HSP 1 Score: 768.8 bits (1984), Expect = 2.5e-218 Identity = 382/385 (99.22%), Postives = 382/385 (99.22%), Query Frame = 0
BLAST of Cmc06g0160851 vs. ExPASy TrEMBL
Match: A0A5A7UXD2 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00340 PE=4 SV=1) HSP 1 Score: 914.8 bits (2363), Expect = 1.4e-262 Identity = 453/454 (99.78%), Postives = 454/454 (100.00%), Query Frame = 0
BLAST of Cmc06g0160851 vs. ExPASy TrEMBL
Match: A0A5D3CIY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001080 PE=4 SV=1) HSP 1 Score: 914.8 bits (2363), Expect = 1.4e-262 Identity = 453/454 (99.78%), Postives = 454/454 (100.00%), Query Frame = 0
BLAST of Cmc06g0160851 vs. ExPASy TrEMBL
Match: A0A0A0LC64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G236040 PE=4 SV=1) HSP 1 Score: 782.7 bits (2020), Expect = 8.2e-223 Identity = 401/454 (88.33%), Postives = 414/454 (91.19%), Query Frame = 0
BLAST of Cmc06g0160851 vs. ExPASy TrEMBL
Match: A0A1S4E0Y7 (LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=3656 GN=LOC103496210 PE=4 SV=1) HSP 1 Score: 768.8 bits (1984), Expect = 1.2e-218 Identity = 382/385 (99.22%), Postives = 382/385 (99.22%), Query Frame = 0
BLAST of Cmc06g0160851 vs. ExPASy TrEMBL
Match: A0A6J1E4T2 (uncharacterized protein LOC111430741 OS=Cucurbita moschata OX=3662 GN=LOC111430741 PE=4 SV=1) HSP 1 Score: 687.6 bits (1773), Expect = 3.6e-194 Identity = 370/516 (71.71%), Postives = 397/516 (76.94%), Query Frame = 0
BLAST of Cmc06g0160851 vs. TAIR 10
Match: AT3G15115.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53180.1); Has 47 Blast hits to 47 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-11 Identity = 77/237 (32.49%), Postives = 111/237 (46.84%), Query Frame = 0
BLAST of Cmc06g0160851 vs. TAIR 10
Match: AT2G42760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 1.5e-11 Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Cmc06g0160851 vs. TAIR 10
Match: AT1G53180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 9.5e-06 Identity = 111/462 (24.03%), Postives = 183/462 (39.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|