Cmc06g0160841 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCATCTTCTCTTAACCACTCTTTAAACAAAATCTTACCTCCACAATTCTCTACGTCTAAAACACAAACTAAAACAAAGAGATATTATTTAGTCTAATTTTGACCCAAAAAAATCTTAGGAAGGTTGGGGGAGAGAAAAGGATTGGAAAATCAAAATGCATGGTAGTGAACATTTTGGCGCAGTGAAGAAAAGTTCTTCTTCCTCTTCCCCTATCCCATCTCCCATATTTGCAGACATAGCATAGCAATCAATCCACCAAAACCCCATAACCCATATCCATCATCATCCATTAAACCTCCTCAAATGTGGCACACCCAGAACCTTCTCTCCTCCAATTTACCTCTTTTCACTCTCTCTCCTCCAACCTACAATCATAAACTCTTTCTCTCTCCTCCAACAACCCTCTCATCTCTTCATAGACCCATCACCTTCCATTCTATTTCTCCACTCACAACCCACCGTTGTTTTTGTTTACCCCAATTCACTGACCTTGCAGATGCCACTTTTCTTGATGATAATGGCCCTGTTGAACTCCCGCCCACCATTTTTGCGACCACTGATAACCCTTCCTCTCTTCAAGTTGCTACCAGTGTTCTTCTTACAGGGGCCATCTCCGTCTTCCTCTTTCGTTCCCTCCGCCGCCGTGCTAAGCGGGTCAAAGAGCTGGTACTGTTTACTACATTTCTTTTAGGCTTACTTGATTTTTTGCTTTTTTAGTCTAGAAACGAATTGGGGTTTGCTGATTTTTTTTTCCTGCTATGTGTTTGAAGAAATTCTTCAAAAAGGCTTTCTGGAGTTGGTAAGTAATTCATTAAATGGTTAAATTGAGTATGAAACTGTAGTGATTTGCTTGGTCTTAGATATTCTCATTCTAGTGGAATGTAGAGTAGTTCAATGAATTTAAAGGATGAACGAGCAAAATTCATTTGCTAGGGTGACTGGCCATGACTAGCTGGATTTAAGAATTGTTTGTATCTTCTGCATTACTTCCTGGCCTCTTTTGCGGCCATCAAGGATGCTACGTCAGTTACAAAGAAGCTAAAATGGGTTGGAGACAAGAGAGTTTTGTTTCCCAAATTTCATGCCCAAGATGTCATAGAACCTACATTTTTTAAAAAAAGTAAACAAAACTTTTCAGTCATAAAATAAAAGGAGACTTATGCTCAAAGTACATAGATCCCAATAGATTCATAAGGAAGAAGAAAAAAAAGAATATTAAGAGAACATTGATAAAGGAAAAATAAACATCCCAAATATTACATAAAATGTGAATGAATGAGCCTGCAAAATGATATCACTAGAAAGCTTTCGGATTACCAAAAGTAAGGCCATTTGACCTAGATTTTGGAAACAATGAAGAAAAAATCTTTGGTTGATTTCACAAACCACTTGCTAATGCTTTCTTCAAAGCGGAAAATTTGAGCGAGAGGAGTGCGGAGGAGAAAACAGGTCATATCTGACAAGCCGAAATGAGCAAAACATGTGAAATCATGAGAAATCTTTCAAATTACCAAAAACAAGGCCATTTGCCTAGATTTTGAAAACAATAAAGAATAATCTTTGACTGTTGTCACAAACTACTTGCTAATACATTTTTCAATGTGGCAAGCGCGAGTGAGAGAGTGAGAAGGAGAAAACACGTAGGATCTAACGTGTGAGATCATGGAAAAACTTCCAAATTACCAAAACAAGGCCATTTGACCTAGATTTTGAAAACAATGAAGAATCATCTTTGGTTGATGTCACAAACCACTTGCTAATACTTTTTTTAGAGCACCAAGCATGAGTGAGAGAGTGAGAAGGAGCTTCAACCCGAGGGCATGAGGGTGGAAAAGCCTTAGCGTGTGAAAGCACTATTAAGTATTATATTGGATTAGTTGGGCGCAACACGAGCGTATGGGAGTGACATAACATAAACAAAGGTTAGACATTCTTATTTCCAGACCAACATGGGTTGGCTTAGTGGTAAAAAGAAAACATATTCTCAATAAATGTTGTAGAGGTTAGGTGGGTTGTCCCATGAGATTAGTCGAGATACGTTTAGCTAGTCTAGATACTAACGGATTTTGGAAAAAAGAATAATAAAAAAGATTAAAAAAAACATTTTTATTTTCAAAATCTGGGACAGACGATTTTGTCTATAAAATTTGGGTCATCTGTATAAAATTATGGGGACAATTGGTAGTGTTCGTAATTATCTTGACTGCCCATGTCTGCAAGTCACTGGAAGTAGTTGGGTTGAAAATTAGATGTCACTGTCGTATTGTGATTCGAGAAGGTCAGATTTAGTTGGTATAAATTGTTAGGTTAATACTCCAAACCTAAGAGTTGGTGTCTAGTGATCGTTTAATGTGGAATCAGATTATGGAGTTATAAATTTGAATCTCATAACTGTCATTTTCTTTCAGATTGATATTAAATAGTTTGTGTGGATTTCGTGAGTCAAATTAATAATTGTGCTCTTGCATAAAGAGAGTTTGATGAATACTAACAAAGTATCAAATGTATTCTAACTAATTAACTTAAATTTTAGGTCTTGTGCTAGTTTAACCTCAATAGTTTATGGTTATGTTCAACAGGATGTTTAACCTTAACTTCTGGAGGAAGTTGAATTAATAGAAAGTTGGCTTAAACCTTTTTAGTGGCCAGTCCGATTTATTTATCATTTTCATTATTATTTTGTATTACTGGAAGATCTTTGAATGTTATATACTTATATTTATATTCTGAAATCATAGTATTTTGGCTGTAAGGTTGGGAGGGGAGGGTGGATTGGAGAATGTTTAAAGGGAGGTATCTTTAGATTTTGGGGCATGGGACAATCTAGTAGAATACTTTGCTTCCTCGTCTTCTAAGCATTCACTTTTTAGTTATTTCTTTTTTTACAGTAATTCCAATGTAATAAACATTTCGTAGCCTTTTTTTTTTTTTTTCTATTATGAACGGATTGTCTTCTCACGATTTCTTTGCAATGTTCTGCATTGTAATTTTTCCCAGTGCAATAAAAAGTGTTTCAGATTTTTTTTCCATTCCTATCTTTTCATTGCTTTATTTAACTTGTCTTTTTTTTATCTGGTGGAAGTCAAATTTCCCTTTCAAAACGTGTTGTGTGTGTGTGTGTGTGTGTCAAGAACATTTTACTCAATCTCATTCCATATCGGTCTTGCAAATGCAAAGTGCAATTTCTCTTATCTGGACTTTTTTCTGGTTCTGAAGTGATTCTGAACTTTCAGATTTATTGAGTTGATTTCTTTGCTGTAAAACATTGGAACTTTTTTGACTTTATGTGCCCATTTTAGAAATTTAGATCTGCTGGAGTAAAAAAGTCTCTGAAGGAGGAAGCAATGGACAGTTTGAAAGCAATTAGTACAGGTCCAATTGCATCGAAGTCAACACCTTCACCTATACAAGCATTCTTGGGAGCAATAGCAGCTGGTGTTATTGCACTAATTTTATATAAATTCACCACTACCATTGAAGCTGCTCTGAACAGACAGACGGTGTCTGATAACTTCTCGGTATGCTCTCGTATTTACTTCATGTGTATACTTGTTTCAACTATTTCTTTTGGCGAACTAAGGGAGGATTTCCCATTCACATCATCCAATATAATGACTTGAGCTAGTCAATGTTGGACATATGCTCTGTGTTTTTCATTCAGAGAACTATTTGATTAATTTCTGTACACTGCATTAACAAATGGATAATGATGCAAGTCCGACAATGAAATTAACCAAAAAAAAAAAATGGAACTTTTGTGAATTGATGTTCTCCTGGGGTTTGCCTCATATAACCTCAGAATGTCATTTAACGATTGGCTTCCATCTTTTTTAGGTTCGACAACTGACGATAACGATAAGGTAACTTCCTCAATTTACTCTAACTCCGTTTGCAGTTAGATAAAAGACTAGTGATGAATTTTGTATCTCTTATATGCAGAACTATCGTGAACGGACTATGCTACCTTGCAACATTTGTTTTCGGAATTAATGCGATTGGTTTATTCCTTTACTCTGGTCAGTTGGCCATGAATTCTGTTATGGAAGAAGGTTCCAAAGATAAAGAACCTAAAGCTAAAAGGGATGAGCAAGTTAGCCCGCCAACTTCAACAGCTGAAACGACCCTCAATAGCACTGAATCAAGCAACAGCAAGGATGATCAAAGTTCAAGTAATTTGTAGTAGTAGAAGAGAACCCTCTCTGATCAAACTTTGGCTGTGTTGGCAGCCATTTGTAAAGGTGATCTGCTCGGATTTAGTCATGCATTTCATGTCATCTGTGATAATTATATTGGTAATTGTACCTGCAAAAATATATTTCTGCTTTGCTAATAGCCTAACACAAAATCTTGGATGAACGATGTATAGAAGGTTGCATACCAATTTTTTTCCCTTTTCTTTTGTTTTTATTTTATTTTTTGTTCTCCTCTTCTTCATAGTACTCTATTCCTAGAGAGATTCAAATCACAAAACTACTTTAGTTGGCAGCACATTTGTATGCCTACTGAATTCATCAGTCAGTTTAAATCCATTGACCCAAATTTCTTTGTTATTGAATTATCAGAAGCACCAAATTCCTCTACTAGCATAACTGATCGTCCTTTCTTCAGCTCACTTAAATCATGGACCCGAGAATTGGTGG CTTCATCTTCTCTTAACCACTCTTTAAACAAAATCTTACCTCCACAATTCTCTACGTCTAAAACACAAACTAAAACAAAGAGATATTATTTAGTCTAATTTTGACCCAAAAAAATCTTAGGAAGGTTGGGGGAGAGAAAAGGATTGGAAAATCAAAATGCATGGTAGTGAACATTTTGGCGCAGTGAAGAAAAGTTCTTCTTCCTCTTCCCCTATCCCATCTCCCATATTTGCAGACATAGCATAGCAATCAATCCACCAAAACCCCATAACCCATATCCATCATCATCCATTAAACCTCCTCAAATGTGGCACACCCAGAACCTTCTCTCCTCCAATTTACCTCTTTTCACTCTCTCTCCTCCAACCTACAATCATAAACTCTTTCTCTCTCCTCCAACAACCCTCTCATCTCTTCATAGACCCATCACCTTCCATTCTATTTCTCCACTCACAACCCACCGTTGTTTTTGTTTACCCCAATTCACTGACCTTGCAGATGCCACTTTTCTTGATGATAATGGCCCTGTTGAACTCCCGCCCACCATTTTTGCGACCACTGATAACCCTTCCTCTCTTCAAGTTGCTACCAGTGTTCTTCTTACAGGGGCCATCTCCGTCTTCCTCTTTCGTTCCCTCCGCCGCCGTGCTAAGCGGGTCAAAGAGCTGAAATTTAGATCTGCTGGAGTAAAAAAGTCTCTGAAGGAGGAAGCAATGGACAGTTTGAAAGCAATTAGTACAGGTCCAATTGCATCGAAGTCAACACCTTCACCTATACAAGCATTCTTGGGAGCAATAGCAGCTGGTGTTATTGCACTAATTTTATATAAATTCACCACTACCATTGAAGCTGCTCTGAACAGACAGACGGTGTCTGATAACTTCTCGGTTCGACAACTGACGATAACGATAAGAACTATCGTGAACGGACTATGCTACCTTGCAACATTTGTTTTCGGAATTAATGCGATTGGTTTATTCCTTTACTCTGGTCAGTTGGCCATGAATTCTGTTATGGAAGAAGGTTCCAAAGATAAAGAACCTAAAGCTAAAAGGGATGAGCAAGTTAGCCCGCCAACTTCAACAGCTGAAACGACCCTCAATAGCACTGAATCAAGCAACAGCAAGGATGATCAAAGTTCAAGTAATTTGTAGTAGTAGAAGAGAACCCTCTCTGATCAAACTTTGGCTGTGTTGGCAGCCATTTGTAAAGGTGATCTGCTCGGATTTAGTCATGCATTTCATGTCATCTGTGATAATTATATTGGTAATTGTACCTGCAAAAATATATTTCTGCTTTGCTAATAGCCTAACACAAAATCTTGGATGAACGATGTATAGAAGGTTGCATACCAATTTTTTTCCCTTTTCTTTTGTTTTTATTTTATTTTTTGTTCTCCTCTTCTTCATAGTACTCTATTCCTAGAGAGATTCAAATCACAAAACTACTTTAGTTGGCAGCACATTTGTATGCCTACTGAATTCATCAGTCAGTTTAAATCCATTGACCCAAATTTCTTTGTTATTGAATTATCAGAAGCACCAAATTCCTCTACTAGCATAACTGATCGTCCTTTCTTCAGCTCACTTAAATCATGGACCCGAGAATTGGTGG ATGTGGCACACCCAGAACCTTCTCTCCTCCAATTTACCTCTTTTCACTCTCTCTCCTCCAACCTACAATCATAAACTCTTTCTCTCTCCTCCAACAACCCTCTCATCTCTTCATAGACCCATCACCTTCCATTCTATTTCTCCACTCACAACCCACCGTTGTTTTTGTTTACCCCAATTCACTGACCTTGCAGATGCCACTTTTCTTGATGATAATGGCCCTGTTGAACTCCCGCCCACCATTTTTGCGACCACTGATAACCCTTCCTCTCTTCAAGTTGCTACCAGTGTTCTTCTTACAGGGGCCATCTCCGTCTTCCTCTTTCGTTCCCTCCGCCGCCGTGCTAAGCGGGTCAAAGAGCTGAAATTTAGATCTGCTGGAGTAAAAAAGTCTCTGAAGGAGGAAGCAATGGACAGTTTGAAAGCAATTAGTACAGGTCCAATTGCATCGAAGTCAACACCTTCACCTATACAAGCATTCTTGGGAGCAATAGCAGCTGGTGTTATTGCACTAATTTTATATAAATTCACCACTACCATTGAAGCTGCTCTGAACAGACAGACGGTGTCTGATAACTTCTCGGTTCGACAACTGACGATAACGATAAGAACTATCGTGAACGGACTATGCTACCTTGCAACATTTGTTTTCGGAATTAATGCGATTGGTTTATTCCTTTACTCTGGTCAGTTGGCCATGAATTCTGTTATGGAAGAAGGTTCCAAAGATAAAGAACCTAAAGCTAAAAGGGATGAGCAAGTTAGCCCGCCAACTTCAACAGCTGAAACGACCCTCAATAGCACTGAATCAAGCAACAGCAAGGATGATCAAAGTTCAAGTAATTTGTAG MWHTQNLLSSNLPLFTLSPPTYNHKLFLSPPTTLSSLHRPITFHSISPLTTHRCFCLPQFTDLADATFLDDNGPVELPPTIFATTDNPSSLQVATSVLLTGAISVFLFRSLRRRAKRVKELKFRSAGVKKSLKEEAMDSLKAISTGPIASKSTPSPIQAFLGAIAAGVIALILYKFTTTIEAALNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSVMEEGSKDKEPKAKRDEQVSPPTSTAETTLNSTESSNSKDDQSSSNL Homology
BLAST of Cmc06g0160841 vs. NCBI nr
Match: XP_016901888.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo]) HSP 1 Score: 524.6 bits (1350), Expect = 5.2e-145 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Cmc06g0160841 vs. NCBI nr
Match: KAA0058836.1 (DUF3082 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 524.6 bits (1350), Expect = 5.2e-145 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Cmc06g0160841 vs. NCBI nr
Match: TYK11253.1 (DUF3082 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 521.2 bits (1341), Expect = 5.7e-144 Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Cmc06g0160841 vs. NCBI nr
Match: XP_031739166.1 (uncharacterized protein LOC101221005 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 6.5e-140 Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Cmc06g0160841 vs. NCBI nr
Match: KAE8650544.1 (hypothetical protein Csa_010668 [Cucumis sativus]) HSP 1 Score: 507.7 bits (1306), Expect = 6.5e-140 Identity = 272/282 (96.45%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Cmc06g0160841 vs. ExPASy TrEMBL
Match: A0A5A7UXD2 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00340 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Cmc06g0160841 vs. ExPASy TrEMBL
Match: A0A1S4E0Y7 (LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 OS=Cucumis melo OX=3656 GN=LOC103496210 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Cmc06g0160841 vs. ExPASy TrEMBL
Match: A0A5D3CH90 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001090 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 2.8e-144 Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Cmc06g0160841 vs. ExPASy TrEMBL
Match: A0A6J1CM21 (uncharacterized protein LOC111012858 OS=Momordica charantia OX=3673 GN=LOC111012858 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.6e-99 Identity = 220/288 (76.39%), Postives = 242/288 (84.03%), Query Frame = 0
BLAST of Cmc06g0160841 vs. ExPASy TrEMBL
Match: A0A5B7BP03 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_040131 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 3.3e-73 Identity = 178/285 (62.46%), Postives = 216/285 (75.79%), Query Frame = 0
BLAST of Cmc06g0160841 vs. TAIR 10
Match: AT3G15110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 231.5 bits (589), Expect = 8.4e-61 Identity = 148/272 (54.41%), Postives = 187/272 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|