Cmc06g0159911 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0159911
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Enzymatic polyprotein
Location	CMiso1.1chr06: 8168064 .. 8168684 (-)
RNA-Seq Expression	Cmc06g0159911
Synteny	Cmc06g0159911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGATATCTTCAAGCAATATAAAGAATTCACAATAGTTTACATTGATGATGTCTTGGTATTCTCAAACACGATCGATCAACATTTCAAACATCTAAGGGTGTTTCTTAATGCAATCAAATCTAATGGTCTTATGGTTTCCCAACCAAAGATCAAACTATTTCAAACAAGAGTAAGATTTCTTGGTTATGAAATTAATCAGGGAATTATCAAGCCAATCCAACGGTCCCTGGAATTTGTTGATAAATTTCCAGATGTGATTCAAGACAAAACTCAACTACAGAGATTTCTTGGTTGCGTAAATTATATCGATGATTTCATCCGAGATCTCCGCTCAATTTGTCTGCCACTGTATGACAGACTAAAAAAGAACCCGAAGCCATGGACGGATGAGCATACTCGAGCAGTCCAATCAATCAAATCTTTGGCCAAAAGCATCCCATGCTTATCTCTTGTAGATGAACAGGCCAAACTCATTATTGATACAGATGCATCCGATATTGGTTACGGAAGCATTCTCAAACAAGAACTTGATGGAAAAATCTCTATTGTCCGTTATCATTCGGGAATATGGAATAGTGCACAAAAAACTATTCCACAGTCAAAAAGGAAGTTTTAG

mRNA sequence

ATGAACGATATCTTCAAGCAATATAAAGAATTCACAATAGTTTACATTGATGATGTCTTGGTATTCTCAAACACGATCGATCAACATTTCAAACATCTAAGGGTGTTTCTTAATGCAATCAAATCTAATGGTCTTATGGTTTCCCAACCAAAGATCAAACTATTTCAAACAAGAGTAAGATTTCTTGGTTATGAAATTAATCAGGGAATTATCAAGCCAATCCAACGGTCCCTGGAATTTGTTGATAAATTTCCAGATGTGATTCAAGACAAAACTCAACTACAGAGATTTCTTGGTTGCGTAAATTATATCGATGATTTCATCCGAGATCTCCGCTCAATTTGTCTGCCACTGTATGACAGACTAAAAAAGAACCCGAAGCCATGGACGGATGAGCATACTCGAGCAGTCCAATCAATCAAATCTTTGGCCAAAAGCATCCCATGCTTATCTCTTGTAGATGAACAGGCCAAACTCATTATTGATACAGATGCATCCGATATTGGTTACGGAAGCATTCTCAAACAAGAACTTGATGGAAAAATCTCTATTGTCCGTTATCATTCGGGAATATGGAATAGTGCACAAAAAACTATTCCACAGTCAAAAAGGAAGTTTTAG

Coding sequence (CDS)

ATGAACGATATCTTCAAGCAATATAAAGAATTCACAATAGTTTACATTGATGATGTCTTGGTATTCTCAAACACGATCGATCAACATTTCAAACATCTAAGGGTGTTTCTTAATGCAATCAAATCTAATGGTCTTATGGTTTCCCAACCAAAGATCAAACTATTTCAAACAAGAGTAAGATTTCTTGGTTATGAAATTAATCAGGGAATTATCAAGCCAATCCAACGGTCCCTGGAATTTGTTGATAAATTTCCAGATGTGATTCAAGACAAAACTCAACTACAGAGATTTCTTGGTTGCGTAAATTATATCGATGATTTCATCCGAGATCTCCGCTCAATTTGTCTGCCACTGTATGACAGACTAAAAAAGAACCCGAAGCCATGGACGGATGAGCATACTCGAGCAGTCCAATCAATCAAATCTTTGGCCAAAAGCATCCCATGCTTATCTCTTGTAGATGAACAGGCCAAACTCATTATTGATACAGATGCATCCGATATTGGTTACGGAAGCATTCTCAAACAAGAACTTGATGGAAAAATCTCTATTGTCCGTTATCATTCGGGAATATGGAATAGTGCACAAAAAACTATTCCACAGTCAAAAAGGAAGTTTTAG

Protein sequence

MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVRFLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYDRLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDGKISIVRYHSGIWNSAQKTIPQSKRKF

Homology

[Close]

BLAST of Cmc06g0159911 vs. NCBI nr
Match: KAA0050444.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 417.5 bits (1072), Expect = 6.5e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR
Sbjct: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD
Sbjct: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120

Query: 121 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
           RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG
Sbjct: 121 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180

Query: 181 KISIVRYHSGIWNSAQKTIPQSKRKF 207
           KISIVRYHSGIWNSAQKTIPQSKRKF
Sbjct: 181 KISIVRYHSGIWNSAQKTIPQSKRKF 206

[Close]

BLAST of Cmc06g0159911 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 187/205 (91.22%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1491 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1550

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1551 FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1610

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYG ILKQEL+G
Sbjct: 1611 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGGILKQELNG 1670

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KISIVRYHSGIWNSAQ+     K++
Sbjct: 1671 KISIVRYHSGIWNSAQRNYSTVKKE 1695

[Close]

BLAST of Cmc06g0159911 vs. NCBI nr
Match: TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102
Identity = 186/205 (90.73%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1521 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1580

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQRSLEFVDKFPD IQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1581 FLGYEINQGIIKPIQRSLEFVDKFPDEIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1640

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYG ILKQEL+G
Sbjct: 1641 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGGILKQELNG 1700

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KIS+VRYHSGIWNSAQK     K++
Sbjct: 1701 KISVVRYHSGIWNSAQKNYSTVKKE 1725

[Close]

BLAST of Cmc06g0159911 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1491 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1550

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQ+SLEFVDKFPDVIQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1551 FLGYEINQGIIKPIQQSLEFVDKFPDVIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1610

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYG ILKQEL+G
Sbjct: 1611 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGGILKQELNG 1670

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KISIVRYHSGIWNSAQ+     K++
Sbjct: 1671 KISIVRYHSGIWNSAQRNYSTVKKE 1695

[Close]

BLAST of Cmc06g0159911 vs. NCBI nr
Match: KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1345 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1404

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1405 FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1464

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAV+SIKSLAKSIPCLSLVDEQAKLIIDTDASDIG+G ILKQEL+G
Sbjct: 1465 RLKKNPKPWTDEHTRAVKSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGFGGILKQELNG 1524

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KISIVRYHSGIWNSAQK     K++
Sbjct: 1525 KISIVRYHSGIWNSAQKNYSTVKKE 1549

[Close]

BLAST of Cmc06g0159911 vs. ExPASy Swiss-Prot
Match: P03556 (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) OX=10645 GN=ORF V PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36
Identity = 82/202 (40.59%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           M++ F+ +++F  VY+DD+LVFSN  + H  H+ + L     +G+++S+ K +LF+ ++ 
Sbjct: 382 MDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKIN 441

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLG EI++G  KP    LE ++KFPD ++DK QLQRFLG + Y  D+I  L  I  PL  
Sbjct: 442 FLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQA 501

Query: 121 RLKKN-PKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILK---- 180
           +LK+N P  WT E T  +Q +K   +  P L     + KLII+TDASD  +G +LK    
Sbjct: 502 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKI 561

Query: 181 QELDGKISIVRYHSGIWNSAQK 198
            E      I RY SG + +A+K
Sbjct: 562 NEGTNTELICRYASGSFKAAEK 583

[Close]

BLAST of Cmc06g0159911 vs. ExPASy Swiss-Prot
Match: P03554 (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) OX=10648 GN=ORF V PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.1e-36
Identity = 82/202 (40.59%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           M++ F+ +++F  VY+DD+LVFSN  + H  H+ + L     +G+++S+ K +LF+ ++ 
Sbjct: 387 MDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKIN 446

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLG EI++G  KP    LE ++KFPD ++DK QLQRFLG + Y  D+I  L  I  PL  
Sbjct: 447 FLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQA 506

Query: 121 RLKKN-PKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILK---- 180
           +LK+N P  WT E T  +Q +K   +  P L     + KLII+TDASD  +G +LK    
Sbjct: 507 KLKENVPWRWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKI 566

Query: 181 QELDGKISIVRYHSGIWNSAQK 198
            E      I RY SG + +A+K
Sbjct: 567 NEGTNTELICRYASGSFKAAEK 588

[Close]

BLAST of Cmc06g0159911 vs. ExPASy Swiss-Prot
Match: P03555 (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) OX=10644 GN=ORF V PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.7e-36
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           M++ F+ +++F  VY+DD+LVFSN  + H  H+ + L     +G+++S+ K +LF+ ++ 
Sbjct: 387 MDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKIN 446

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLG EI++G  KP    LE ++KFPD ++DK QLQRFLG + Y  D+I  L  I  PL  
Sbjct: 447 FLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQA 506

Query: 121 RLKKN-PKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILK---- 180
           +LK+N P  WT E T  +Q +K   +  P L     + KLII+TDASD  +G +LK    
Sbjct: 507 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKI 566

Query: 181 QELDGKISIVRYHSGIWNSAQK 198
            E      I RY SG + +A++
Sbjct: 567 NEGTNTELICRYASGSFKAAER 588

[Close]

BLAST of Cmc06g0159911 vs. ExPASy Swiss-Prot
Match: Q02964 (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) OX=31556 GN=ORF V PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.7e-36
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           M++ F+ +++F  VY+DD+LVFSN  + H  H+ + L     +G+++S+ K +LF+ ++ 
Sbjct: 387 MDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKIN 446

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLG EI++G  KP    LE ++KFPD ++DK QLQRFLG + Y  D+I  L  I  PL  
Sbjct: 447 FLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPKLAQIRKPLQA 506

Query: 121 RLKKN-PKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILK---- 180
           +LK+N P  WT E T  +Q +K   +  P L     + KLII+TDASD  +G +LK    
Sbjct: 507 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKI 566

Query: 181 QELDGKISIVRYHSGIWNSAQK 198
            E      I RY SG + +A++
Sbjct: 567 NEGTNTELICRYASGSFKAAER 588

[Close]

BLAST of Cmc06g0159911 vs. ExPASy Swiss-Prot
Match: Q00962 (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) OX=31557 GN=ORF V PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35
Identity = 79/202 (39.11%), Postives = 123/202 (60.89%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           M++ F+ +++F  VY+DD++VFSN  + H  H+ + L     +G+++S+ K +LF+ ++ 
Sbjct: 388 MDEAFRVFRKFCCVYVDDIVVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKIN 447

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLG EI++G  KP    LE ++KFPD ++DK QLQRFLG + Y  D+I +L  +  PL  
Sbjct: 448 FLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTYASDYIPNLAQMRQPLQA 507

Query: 121 RLKKN-PKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILK---- 180
           +LK+N P  WT E T  +Q +K   +  P L     + KLII+TDASD  +G +LK    
Sbjct: 508 KLKENVPWKWTKEDTLYMQKVKKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKI 567

Query: 181 QELDGKISIVRYHSGIWNSAQK 198
            E      I RY SG + +A++
Sbjct: 568 NEGTNTELICRYRSGSFKAAER 589

[Close]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL
Match: A0A5A7U5C9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00500 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.1e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
           MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR
Sbjct: 1   MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60

Query: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
           FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD
Sbjct: 61  FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120

Query: 121 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
           RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG
Sbjct: 121 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180

Query: 181 KISIVRYHSGIWNSAQKTIPQSKRKF 207
           KISIVRYHSGIWNSAQKTIPQSKRKF
Sbjct: 181 KISIVRYHSGIWNSAQKTIPQSKRKF 206

[Close]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 187/205 (91.22%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1491 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1550

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1551 FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1610

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYG ILKQEL+G
Sbjct: 1611 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGGILKQELNG 1670

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KISIVRYHSGIWNSAQ+     K++
Sbjct: 1671 KISIVRYHSGIWNSAQRNYSTVKKE 1695

[Close]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.0e-103
Identity = 186/205 (90.73%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1521 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1580

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQRSLEFVDKFPD IQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1581 FLGYEINQGIIKPIQRSLEFVDKFPDEIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1640

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYG ILKQEL+G
Sbjct: 1641 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGGILKQELNG 1700

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KIS+VRYHSGIWNSAQK     K++
Sbjct: 1701 KISVVRYHSGIWNSAQKNYSTVKKE 1725

[Close]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.0e-103
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1491 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1550

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQ+SLEFVDKFPDVIQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1551 FLGYEINQGIIKPIQQSLEFVDKFPDVIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1610

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYG ILKQEL+G
Sbjct: 1611 RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGGILKQELNG 1670

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KISIVRYHSGIWNSAQ+     K++
Sbjct: 1671 KISIVRYHSGIWNSAQRNYSTVKKE 1695

[Close]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.6e-103
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1    MNDIFKQYKEFTIVYIDDVLVFSNTIDQHFKHLRVFLNAIKSNGLMVSQPKIKLFQTRVR 60
            MNDIF QY+EFTIVYIDDVLVFSNT+DQHFKHLRVFLN IKSNGL+VSQPKIKLFQT++R
Sbjct: 1345 MNDIFNQYQEFTIVYIDDVLVFSNTVDQHFKHLRVFLNVIKSNGLVVSQPKIKLFQTKIR 1404

Query: 61   FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIDDFIRDLRSICLPLYD 120
            FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYI DFIRDLRSICLPLYD
Sbjct: 1405 FLGYEINQGIIKPIQRSLEFVDKFPDVIQDKTQLQRFLGCVNYIGDFIRDLRSICLPLYD 1464

Query: 121  RLKKNPKPWTDEHTRAVQSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGYGSILKQELDG 180
            RLKKNPKPWTDEHTRAV+SIKSLAKSIPCLSLVDEQAKLIIDTDASDIG+G ILKQEL+G
Sbjct: 1465 RLKKNPKPWTDEHTRAVKSIKSLAKSIPCLSLVDEQAKLIIDTDASDIGFGGILKQELNG 1524

Query: 181  KISIVRYHSGIWNSAQKTIPQSKRK 206
            KISIVRYHSGIWNSAQK     K++
Sbjct: 1525 KISIVRYHSGIWNSAQKNYSTVKKE 1549

The following BLAST results are available for this feature:

BLAST of Cmc06g0159911 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050444.1	6.5e-113	100.00	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98087.1	3.6e-103	91.22	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ97599.1	1.0e-102	90.73	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	1.0e-102	90.73	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0057417.1	1.4e-102	90.73	Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote...	[more]

BLAST of Cmc06g0159911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P03556	3.9e-36	40.59	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) OX=10645 GN=ORF V...	[more]
P03554	5.1e-36	40.59	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) OX=10648 G...	[more]
P03555	8.7e-36	40.10	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) OX=10644 GN=O...	[more]
Q02964	8.7e-36	40.10	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) OX=31556 GN=ORF V...	[more]
Q00962	1.5e-35	39.11	Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) OX=31557 GN=OR...	[more]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5C9	3.1e-113	100.00	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17...	[more]
A0A5D3BG41	1.7e-103	91.22	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5D3BEY3	5.0e-103	90.73	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]
A0A5A7UF59	5.0e-103	90.73	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5A7URX9	6.6e-103	90.73	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21...	[more]

BLAST of Cmc06g0159911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..72 e-value: 3.8E-18 score: 67.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 78..163 e-value: 5.6E-15 score: 57.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..66 e-value: 1.6E-11 score: 44.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..66 score: 12.626934
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 129..204 e-value: 3.2E-15 score: 55.9
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 1..203
None	No IPR available	PANTHER	PTHR34072:SF8	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..203
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0159911.1	Cmc06g0159911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding