Cmc06g0159861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0159861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposase
Location	CMiso1.1chr06: 8080365 .. 8081451 (-)
RNA-Seq Expression	Cmc06g0159861
Synteny	Cmc06g0159861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATAGCAGTGAGGATGAAAGAGAAATGCTTCCAGAAGTAAGAAAGAAATCATTTGTTCCACGTGGGCCAACTACTATGTCTGAGTTGGCCTCAGTGAGAAATTCTGGGCAAAAGTTGCTTATTCAATTTAATGAACACGGGCAACCTGTTGGAGCCACGTCTAAAAAAATGCAAAGTTACATTGGTGTGTGCGTTCGGCAACAGATTCCTATCACATACAACTCTTGGAAAGAAGTTCCGAATGAGCTAAAAGATAAAATCTATGATTGTATATCAGTATGAGTTCTATTATTATGTTTTTCATATAATGGAGTTTGCTTTACACTCTAAGTTTAACTAAGCGTTTCTTTTTTTCTTTTTTTTTTGTAGATGTCGTTCGATTTACAACCCAATGCTAAACATTCTATACTTATGTCTGCATCAAGAAAGTTTCGAACGTTCAAGACCACGTTAACTCAGAAGTATATACTTCTGTCTAAGGATCAACCATCACTCTTGTAGTTTCCTCCCAAAATCTATTCTCATATAAATCAAGAAGATTGGGAATCATTTGTAAATGCTAGACTAAGTGAAGAATGGGAGGTAAATAAGTTTACATTTTCACTTTAATTTTGTTTTGATATCTACCTACAAACTAATACGTTGTACAGGATTATAGTCGTATTCAAAGGGAAAGAAGGTCGAAATGTGTATACAATCACCACATGTCACGTAAGGGATATGCTAATCTTTTCGATGAACTAGTGAGTATTTCTAATTAAATTCAAGAATTTATCTTAATATGTTGTTGTTAATTAAATATCTATCTTTTGTTGTAGAAAATAACGCATGATGTTTCCTATCGTTCAACTCTTTGGAAATAAGCATGGAAAGGAAGAAATAATGATTATTTTGATGATGCTACTCGAGATTGTGCCTCTCGGATTGTAAGTATACTTATGATTACAATACATAATCTTTTGTTAACCTAACTAATGATGAAAAAACTTGTATTGTTTTATAGGATGAATTAGTTGCAACACATAAAAATGAGGACATCTTGACTGACGCATTGGGTTCCAAGGAGCACGGTGGACGTGTA

mRNA sequence

ATGGAGGATAGCAGTGAGGATGAAAGAGAAATGCTTCCAGAAGTAAGAAAGAAATCATTTGTTCCACGTGGGCCAACTACTATGTCTGAGTTGGCCTCAGTGAGAAATTCTGGGCAAAAGTTGCTTATTCAATTTAATGAACACGGGCAACCTGTTGGAGCCACGTCTAAAAAAATGCAAAGTTACATTGGTGTGTGCGTTCGGCAACAGATTCCTATCACATACAACTCTTGGAAAGAAGTTCCGAATGAGCTAAAAGATAAAATCTATGATTGTATATCAATGTCGTTCGATTTACAACCCAATGCTAAACATTCTATACTTATGTCTGCATCAAGAAAGTTTCGAACGTTCAAGACCACGTTAACTCAGAAGTATATACTTCTGTCTAAGGATCAACCATCACTCTTGTAGTTTCCTCCCAAAATCTATTCTCATATAAATCAAGAAGATTGGGAATCATTTGTAAATGCTAGACTAAGTGAAGAATGGGAGGATTATAGTCGTATTCAAAGGGAAAGAAGGTCGAAATGTGTATACAATCACCACATGTCACGTAAGGGATATGCTAATCTTTTCGATGAACTAAAAATAACGCATGATGTTTCCTATCGTTCAACTCTTTGGAAATAAGCATGGAAAGGAAGAAATAATGATTATTTTGATGATGCTACTCGAGATTGTGCCTCTCGGATTGATGAATTAGTTGCAACACATAAAAATGAGGACATCTTGACTGACGCATTGGGTTCCAAGGAGCACGGTGGACGTGTA

Coding sequence (CDS)

ATGGAGGATAGCAGTGAGGATGAAAGAGAAATGCTTCCAGAAGTAAGAAAGAAATCATTTGTTCCACGTGGGCCAACTACTATGTCTGAGTTGGCCTCAGTGAGAAATTCTGGGCAAAAGTTGCTTATTCAATTTAATGAACACGGGCAACCTGTTGGAGCCACGTCTAAAAAAATGCAAAGTTACATTGGTGTGTGCGTTCGGCAACAGATTCCTATCACATACAACTCTTGGAAAGAAGTTCCGAATGAGCTAAAAGATAAAATCTATGATTGTATATCAATGTCGTTCGATTTACAACCCAATGCTAAACATTCTATACTTATGTCTGCATCAAGAAAGTTTCGAACGTTCAAGACCACGTTAACTCAGAAGTATATACTTCTGTCTAAGGATCAACCATCACTCTTGTAG

Protein sequence

MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQSYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKTTLTQKYILLSKDQPSLL

Homology

[Close]

BLAST of Cmc06g0159861 vs. NCBI nr
Match: XP_016903414.1 (PREDICTED: uncharacterized protein LOC107992176 [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 1.3e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
           MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ
Sbjct: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60

Query: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
           SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120

Query: 121 TLTQKYILLSKDQPSLL 138
           TLTQKYILLSKDQPSLL
Sbjct: 121 TLTQKYILLSKDQPSLL 137

[Close]

BLAST of Cmc06g0159861 vs. NCBI nr
Match: TYK11813.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1    MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
            MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 894  MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 953

Query: 61   SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
            SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 954  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 1013

Query: 121  TLTQKYILLSKDQPSLL 138
            TLTQKYIL SKDQPSLL
Sbjct: 1014 TLTQKYILPSKDQPSLL 1030

[Close]

BLAST of Cmc06g0159861 vs. NCBI nr
Match: TYK27996.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
           MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 298 MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 357

Query: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
           SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 358 SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 417

Query: 121 TLTQKYILLSKDQPSLL 138
           TLTQKYIL SKDQPSLL
Sbjct: 418 TLTQKYILPSKDQPSLL 434

[Close]

BLAST of Cmc06g0159861 vs. NCBI nr
Match: TYK21543.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1    MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
            MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 894  MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 953

Query: 61   SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
            SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 954  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 1013

Query: 121  TLTQKYILLSKDQPSLL 138
            TLTQKYIL SKDQPSLL
Sbjct: 1014 TLTQKYILPSKDQPSLL 1030

[Close]

BLAST of Cmc06g0159861 vs. NCBI nr
Match: KAA0060234.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
           MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 689 MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 748

Query: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
           SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 749 SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 808

Query: 121 TLTQKYILLSKDQPSLL 138
           TLTQKYIL SKDQPSLL
Sbjct: 809 TLTQKYILPSKDQPSLL 825

[Close]

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL
Match: A0A1S4E5B4 (uncharacterized protein LOC107992176 OS=Cucumis melo OX=3656 GN=LOC107992176 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 6.4e-70
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
           MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ
Sbjct: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60

Query: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
           SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120

Query: 121 TLTQKYILLSKDQPSLL 138
           TLTQKYILLSKDQPSLL
Sbjct: 121 TLTQKYILLSKDQPSLL 137

[Close]

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL
Match: A0A5D3C2U9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1    MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
            MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 894  MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 953

Query: 61   SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
            SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 954  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 1013

Query: 121  TLTQKYILLSKDQPSLL 138
            TLTQKYIL SKDQPSLL
Sbjct: 1014 TLTQKYILPSKDQPSLL 1030

[Close]

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL
Match: A0A5A7TY60 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00820 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
           MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 557 MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 616

Query: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
           SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 617 SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 676

Query: 121 TLTQKYILLSKDQPSLL 138
           TLTQKYIL SKDQPSLL
Sbjct: 677 TLTQKYILPSKDQPSLL 693

[Close]

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL
Match: A0A5A7VGQ2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1    MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
            MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 894  MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 953

Query: 61   SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
            SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 954  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 1013

Query: 121  TLTQKYILLSKDQPSLL 138
            TLTQKYIL SKDQPSLL
Sbjct: 1014 TLTQKYILPSKDQPSLL 1030

[Close]

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL
Match: A0A5D3DBD0 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00150 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MEDSSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSKKMQ 60
           MEDSSEDEREMLPEVRKKSFVPRGPTTMSELA VRNSGQKL IQFNEHGQPVGATSKKMQ
Sbjct: 636 MEDSSEDEREMLPEVRKKSFVPRGPTTMSELALVRNSGQKLPIQFNEHGQPVGATSKKMQ 695

Query: 61  SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 120
           SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT
Sbjct: 696 SYIGVCVRQQIPITYNSWKEVPNELKDKIYDCISMSFDLQPNAKHSILMSASRKFRTFKT 755

Query: 121 TLTQKYILLSKDQPSLL 138
           TLTQKYIL SKDQPSLL
Sbjct: 756 TLTQKYILPSKDQPSLL 772

The following BLAST results are available for this feature:

BLAST of Cmc06g0159861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903414.1	1.3e-69	100.00	PREDICTED: uncharacterized protein LOC107992176 [Cucumis melo]	[more]
TYK11813.1	2.7e-67	97.81	transposase [Cucumis melo var. makuwa]	[more]
TYK27996.1	2.7e-67	97.81	transposase [Cucumis melo var. makuwa]	[more]
TYK21543.1	2.7e-67	97.81	transposase [Cucumis melo var. makuwa]	[more]
KAA0060234.1	2.7e-67	97.81	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0159861 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E5B4	6.4e-70	100.00	uncharacterized protein LOC107992176 OS=Cucumis melo OX=3656 GN=LOC107992176 PE=...	[more]
A0A5D3C2U9	1.3e-67	97.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE...	[more]
A0A5A7TY60	1.3e-67	97.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00820 PE...	[more]
A0A5A7VGQ2	1.3e-67	97.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=...	[more]
A0A5D3DBD0	1.3e-67	97.81	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00150 PE...	[more]

BLAST of Cmc06g0159861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33018	OS10G0338966 PROTEIN-RELATED	coord: 1..133
None	No IPR available	PANTHER	PTHR33018:SF19	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0159861.1	Cmc06g0159861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0008234	cysteine-type peptidase activity