Cmc06g0159661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0159661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr06: 7868224 .. 7870410 (-)
RNA-Seq Expression	Cmc06g0159661
Synteny	Cmc06g0159661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTATTCAGAAAGGAGAAATAAAACCTTGTTAGACATGGTTAGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCATTTTGGGGGTATGCAGTAGAGACTGCAGTTCACATCTTGAACAATGCTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAACACACGTGTTAGTGACAAATCCCAAGAAGTTGAAATCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGCTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTTAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAAGGGTTGACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTAAGCCCGAGGGGTTCATAACCCGAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAAATCTTGGAACATTAGGTTTGATATTGCGATCAAATCCTACGGTTTTGACCAGAACGTTGATGAACCTTGTTTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCTTCATTGGGAATGATATGGGATACCTTACTGACGTTAAAGCTTGGTTAGCAGCCTAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCGATGTAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGATATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGATTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATTGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATATGTAGCTGCTTGTGAAGCAGTAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTATGATAACAGTGAGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGGGATCGTCACTAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAAAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

mRNA sequence

ATGGTGTATTCAGAAAGGAGAAATAAAACCTTGTTAGACATGGTTAGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCATTTTGGGGGTATGCAGTAGAGACTGCAGTTCACATCTTGAACAATGCTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAACACACGTGTTAGTGACAAATCCCAAGAAGTTGAAATCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGCTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTTAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAAGGGTTGACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTAAGCCCGAGGGGTTCATAACCCGAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAAATCTTGGAACATTAGGTTTGATATTGCGATCAAATCCTACGGTTTTGACCAGAACGTTGATGAACCTTGTTTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCTTCATTGGGAATGATATGGGATACCTTACTGACGTTAAAGCTTGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGATATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGATTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATTGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATATGTAGCTGCTTGTGAAGCAGTAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTATGATAACAGTGAGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGGGATCGTCACTAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAAAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGGTGTATTCAGAAAGGAGAAATAAAACCTTGTTAGACATGGTTAGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCATTTTGGGGGTATGCAGTAGAGACTGCAGTTCACATCTTGAACAATGCTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAACACACGTGTTAGTGACAAATCCCAAGAAGTTGAAATCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATAAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGCTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTTAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAAACCTTCAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAAGGGTTGACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTAAGCCCGAGGGGTTCATAACCCGAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAAATCTTGGAACATTAGGTTTGATATTGCGATCAAATCCTACGGTTTTGACCAGAACGTTGATGAACCTTGTTTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCTTCATTGGGAATGATATGGGATACCTTACTGACGTTAAAGCTTGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGATATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGATTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATTGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATATGTAGCTGCTTGTGAAGCAGTAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTATGATAACAGTGAGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGGGATCGTCACTAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAAAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Protein sequence

MVYSERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR

Homology

[Close]

BLAST of Cmc06g0159661 vs. NCBI nr
Match: KAA0025159.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0


Query: 33   VETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQF 92
            VETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQF
Sbjct: 366  VETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQF 425

Query: 93   VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVG 152
            VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVG
Sbjct: 426  VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVG 485

Query: 153  PSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQA 212
            PSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQA
Sbjct: 486  PSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQA 545

Query: 213  MNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKAR 272
            MNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKAR
Sbjct: 546  MNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKAR 605

Query: 273  LVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF 332
            LVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
Sbjct: 606  LVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF 665

Query: 333  MSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKIN 392
            MSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKIN
Sbjct: 666  MSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKIN 725

Query: 393  KGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVG 452
            KGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVG
Sbjct: 726  KGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVG 785

Query: 453  SLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILT 512
            SLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILT
Sbjct: 786  SLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILT 845

Query: 513  GYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVW 572
            GYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVW
Sbjct: 846  GYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVW 905

Query: 573  LRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGI 632
            LRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGI
Sbjct: 906  LRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGI 965

Query: 633  VTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR 671
            VTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR
Sbjct: 966  VTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR 1003

[Close]

BLAST of Cmc06g0159661 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 642/725 (88.55%), Postives = 652/725 (89.93%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSL 63
            SERRN+TLLDMV SMMSYAQLPSSFWGYAVETAVHILNN PSKSVSETPFELWRGRKPSL
Sbjct: 511  SERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSL 570

Query: 64   SHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 123
            SHFRIWGCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE
Sbjct: 571  SHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 630

Query: 124  DHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 183
            DHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS
Sbjct: 631  DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 690

Query: 184  QPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDL 243
            QPNRYLGLTETQ VIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFN VWELVDL
Sbjct: 691  QPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL 750

Query: 244  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILL 303
            PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRE VDYEETFSPVAMLKSIRILL
Sbjct: 751  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 810

Query: 304  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASK 363
            SIATFYDYEIWQMDVKTAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+
Sbjct: 811  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 870

Query: 364  SWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW- 423
            SWNIRFD AIKSYGFDQNVDEPC+YKKINKGKVAFLVLYVDDIL IGND+GYLTDVKAW 
Sbjct: 871  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 930

Query: 424  ---------------------------------------------------------HGV 483
                                                                     HGV
Sbjct: 931  AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 990

Query: 484  HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 543
            HLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT
Sbjct: 991  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 1050

Query: 544  AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 603
            AVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKST GSVFTLNGGAVVWRS
Sbjct: 1051 AVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS 1110

Query: 604  IKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKE 663
            IKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVVPNMNLPITLY DNS AVANSKE
Sbjct: 1111 IKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKE 1170

Query: 664  PRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLR 671
            PRSHKRGKHIERKYHLIREIVQRGD IVTKIASEHNIADPFTKTLTAKVFEGHL+SLGLR
Sbjct: 1171 PRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLR 1230

[Close]

BLAST of Cmc06g0159661 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 642/725 (88.55%), Postives = 652/725 (89.93%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSL 63
            SERRN+TLLDMV SMMSYAQLPSSFWGYAVETAVHILNN PSKSVSETPFELWRGRKPSL
Sbjct: 385  SERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSL 444

Query: 64   SHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 123
            SHFRIWGCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE
Sbjct: 445  SHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 504

Query: 124  DHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 183
            DHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS
Sbjct: 505  DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 564

Query: 184  QPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDL 243
            QPNRYLGLTETQ VIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFN VWELVDL
Sbjct: 565  QPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL 624

Query: 244  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILL 303
            PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRE VDYEETFSPVAMLKSIRILL
Sbjct: 625  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 684

Query: 304  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASK 363
            SIATFYDYEIWQMDVKTAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+
Sbjct: 685  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 744

Query: 364  SWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW- 423
            SWNIRFD AIKSYGFDQNVDEPC+YKKINKGKVAFLVLYVDDIL IGND+GYLTDVKAW 
Sbjct: 745  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 804

Query: 424  ---------------------------------------------------------HGV 483
                                                                     HGV
Sbjct: 805  AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 864

Query: 484  HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 543
            HLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT
Sbjct: 865  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 924

Query: 544  AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 603
            AVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKST GSVFTLNGGAVVWRS
Sbjct: 925  AVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS 984

Query: 604  IKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKE 663
            IKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVVPNMNLPITLY DNS AVANSKE
Sbjct: 985  IKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKE 1044

Query: 664  PRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLR 671
            PRSHKRGKHIERKYHLIREIVQRGD IVTKIASEHNIADPFTKTLTAKVFEGHL+SLGLR
Sbjct: 1045 PRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLR 1104

[Close]

BLAST of Cmc06g0159661 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 635/725 (87.59%), Postives = 649/725 (89.52%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSL 63
            SERRN+TLLDMV SMMSYAQLPSSFWGYAVETAVHILNN PSKSVSETPFELWRGRKPSL
Sbjct: 511  SERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSL 570

Query: 64   SHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 123
            SHFRIWGCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEE
Sbjct: 571  SHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEE 630

Query: 124  DHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 183
            DHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS
Sbjct: 631  DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 690

Query: 184  QPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDL 243
            QPNRYLGLTETQ VIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFN VWELVDL
Sbjct: 691  QPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL 750

Query: 244  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILL 303
            PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++E VDYEETFS VAMLKSIRILL
Sbjct: 751  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILL 810

Query: 304  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASK 363
            SIA FYDYEIWQMDVKTAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+
Sbjct: 811  SIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 870

Query: 364  SWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW- 423
            SWNIRFD AIKSYGFDQNVDEPC+YKKINKGKVAFLVLYVDDIL IGND+GYLTDVKAW 
Sbjct: 871  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 930

Query: 424  ---------------------------------------------------------HGV 483
                                                                     HGV
Sbjct: 931  AAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 990

Query: 484  HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 543
            HLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT
Sbjct: 991  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 1050

Query: 544  AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 603
            AVKIILKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKST  SVFTLNGGAVVWRS
Sbjct: 1051 AVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRS 1110

Query: 604  IKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKE 663
            IKQGCIADSTMEAEYVAACEA KEAVWL+KFLHDLEVVPNMNLPITLY DNS AVANSKE
Sbjct: 1111 IKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKE 1170

Query: 664  PRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLR 671
            PRSHKRGKHIERKYHLIREIVQRGD IVTKIASEHNIADPFTKTLTAKVFEGHL+SLGLR
Sbjct: 1171 PRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLR 1230

[Close]

BLAST of Cmc06g0159661 vs. NCBI nr
Match: KAA0033121.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 572/681 (83.99%), Postives = 597/681 (87.67%), Query Frame = 0


Query: 5   ERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSLS 64
           ERRN+T+LDMV SMMSYAQLPSSFWGYAVETAVHILNN  SKSVSETPFELWRGRKPSLS
Sbjct: 122 ERRNRTMLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWRGRKPSLS 181

Query: 65  HFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEED 124
           HF+I GCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDPQ+NRV VSTNATFLEED
Sbjct: 182 HFKILGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTNATFLEED 241

Query: 125 HMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQ 184
           HMR+HKP++KLVL+EA D+STRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VSQ
Sbjct: 242 HMRDHKPQNKLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRRSGRIVSQ 301

Query: 185 PNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDLP 244
           PNRYLGLTETQ VIPDDGVEDPLSY QAMNDVDKDQWVKAMDLEMESMYFNL+WELVDLP
Sbjct: 302 PNRYLGLTETQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLMWELVDLP 361

Query: 245 EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILLS 304
           EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRE VDYEETFSPVAMLKSIRILLS
Sbjct: 362 EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLS 421

Query: 305 IATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASKS 364
           IATFYDYEIW+MDV TAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+S
Sbjct: 422 IATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS 481

Query: 365 WNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW-- 424
           WNIRFD AIKSYGF+QNVDEPC+YKKINKGKV FLVLYVDDIL IGND+GYLTDVKAW  
Sbjct: 482 WNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLTDVKAWLA 541

Query: 425 --------------------------------------------------------HGVH 484
                                                                   HGVH
Sbjct: 542 AQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVH 601

Query: 485 LSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTA 544
           LSKEQCPKTPQEVEDMRRIPYASAVGSLMY + CTR +ICYAV IVSRYQSN GLDHWTA
Sbjct: 602 LSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVSRYQSNLGLDHWTA 661

Query: 545 VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSI 604
           VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQT+KDSRKST  SVFTLNGGA+VWRSI
Sbjct: 662 VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTNKDSRKSTSRSVFTLNGGAIVWRSI 721

Query: 605 KQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEP 628
           KQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVVPNMNLPITLY DNS AVANSKEP
Sbjct: 722 KQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEP 781

[Close]

BLAST of Cmc06g0159661 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.6e-134
Identity = 281/741 (37.92%), Postives = 411/741 (55.47%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVS-ETPFELWRGRKPS 63
            +ER N+T+++ V SM+  A+LP SFWG AV+TA +++N +PS  ++ E P  +W  ++ S
Sbjct: 585  AERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVS 644

Query: 64   LSHFRIWGCP--THVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATF 123
             SH +++GC    HV      KL  +S  C F+GY  E  G   +DP + +V  S +  F
Sbjct: 645  YSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF 704

Query: 124  LEEDHM----RNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQ----------- 183
             E +       + K ++ ++ +  T  ST   +     S  DE +  G+           
Sbjct: 705  RESEVRTAADMSEKVKNGIIPNFVTIPSTS-NNPTSAESTTDEVSEQGEQPGEVIEQGEQ 764

Query: 184  --------SHPSQSLRMP---RRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQAMN 243
                     HP+Q        RRS R   +  RY     T+ V+  D   +P S K+ ++
Sbjct: 765  LDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY---PSTEYVLISDD-REPESLKEVLS 824

Query: 244  DVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 303
              +K+Q +KAM  EMES+  N  ++LV+LP+G +P+ CKW++K K+D   K+  +KARLV
Sbjct: 825  HPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLV 884

Query: 304  AKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMS 363
             KG+ Q++ +D++E FSPV  + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE I+M 
Sbjct: 885  VKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYME 944

Query: 364  KPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLY-KKINK 423
            +PEGF   G++  VCKLN+S+YGLKQA + W ++FD  +KS  + +   +PC+Y K+ ++
Sbjct: 945  QPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSE 1004

Query: 424  GKVAFLVLYVDDILFIGNDMGYL-------------------------------TDVKAW 483
                 L+LYVDD+L +G D G +                               T  K W
Sbjct: 1005 NNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLW 1064

Query: 484  HG---------------------------VHLSKEQCPKTPQEVEDMRRIPYASAVGSLM 543
                                         + LSK+ CP T +E  +M ++PY+SAVGSLM
Sbjct: 1065 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1124

Query: 544  YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 603
            YAM+CTRPDI +AVG+VSR+  NPG +HW AVK IL+YLR T    L +G  D IL GYT
Sbjct: 1125 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYT 1184

Query: 604  DSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVWLRK 657
            D+D   D D+RKS+ G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE +WL++
Sbjct: 1185 DADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKR 1244

[Close]

BLAST of Cmc06g0159661 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 334.0 bits (855), Expect = 4.0e-90
Identity = 240/822 (29.20%), Postives = 381/822 (46.35%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSV---SETPFELWRGRK 63
            SER  +T+ +   +M+S A+L  SFWG AV TA +++N  PS+++   S+TP+E+W  +K
Sbjct: 585  SERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKK 644

Query: 64   PSLSHFRIWGCPTHVLVTNPK-KLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNAT 123
            P L H R++G   +V + N + K   +S    FVGY  E  G   +D    +  V+ +  
Sbjct: 645  PYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVV 704

Query: 124  FLEEDHMRNHKPRSKLVL----SEATDK-----STRVVDEVGP--SSRVDETTTSGQSHP 183
              E + + +   + + V      E+ +K     S +++    P  S   D       S  
Sbjct: 705  VDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKE 764

Query: 184  SQSLRMPRRSGRVV--------------------SQPNRYL------------------- 243
            S++   P  S +++                     + N+Y                    
Sbjct: 765  SENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGS 824

Query: 244  ------GLTETQAVIPDDGVEDP---------------------LSYKQ----------- 303
                    +ET   + + G+++P                     +SY +           
Sbjct: 825  GNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLN 884

Query: 304  ---AMNDV-----------DKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYK 363
                 NDV           DK  W +A++ E+ +   N  W +   PE    +  +W++ 
Sbjct: 885  AHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFS 944

Query: 364  RKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMD 423
             K +  G    +KARLVA+G+TQ+ ++DYEETF+PVA + S R +LS+   Y+ ++ QMD
Sbjct: 945  VKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMD 1004

Query: 424  VKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYG 483
            VKTAFLNG L+E I+M  P+G         VCKLN++IYGLKQA++ W   F+ A+K   
Sbjct: 1005 VKTAFLNGTLKEEIYMRLPQGISC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1064

Query: 484  FDQNVDEPCLY--KKINKGKVAFLVLYVDDILFIGNDMGY----------------LTDV 543
            F  +  + C+Y   K N  +  +++LYVDD++    DM                  L ++
Sbjct: 1065 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1124

Query: 544  KAWHGVHL----------------------SKEQC----PKTPQEV-------EDMRRIP 603
            K + G+ +                      + E C       P ++       ++    P
Sbjct: 1125 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTP 1184

Query: 604  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYG- 663
              S +G LMY MLCTRPD+  AV I+SRY S    + W  +K +L+YL+ T D  L++  
Sbjct: 1185 CRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKK 1244

Query: 664  --AKDLILTGYTDSDFQTDKDSRKSTLGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVA 665
              A +  + GY DSD+   +  RKST G +F + +   + W + +Q  +A S+ EAEY+A
Sbjct: 1245 NLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMA 1304

[Close]

BLAST of Cmc06g0159661 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.1e-77
Identity = 224/839 (26.70%), Postives = 345/839 (41.12%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVS-ETPFELWRGRKPS 63
            SER+++ +++   +++S+A +P ++W YA   AV+++N  P+  +  E+PF+   G  P+
Sbjct: 625  SERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPN 684

Query: 64   LSHFRIWGCPTHVLVT--NPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATF 123
                R++GC  +  +   N  KL  +SR C F+GY       L    Q +R+++S +  F
Sbjct: 685  YDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRF 744

Query: 124  LEE-----------DHMRNHKPRSKLVLSEATDKSTR----------------------- 183
             E              ++  +  S  V S  T   TR                       
Sbjct: 745  DENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPS 804

Query: 184  ----------------------------VVDEVGPSSRVDETTTSGQSHPS--------- 243
                                           + GP      T T  Q+H S         
Sbjct: 805  APFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPT 864

Query: 244  --------QSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQAMND------ 303
                    QSL  P +S      P      + T    P   +  P    Q +N+      
Sbjct: 865  NESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPL 924

Query: 304  --------------------------------------VDKDQWVKAMDLEMESMYFNLV 363
                                                  +  ++W  AM  E+ +   N  
Sbjct: 925  NTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHT 984

Query: 364  WELVDLPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAML 423
            W+LV  P   V  +GC+WI+ +K +S G +  +KARLVAKGY QR  +DY ETFSPV   
Sbjct: 985  WDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKS 1044

Query: 424  KSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIY 483
             SIRI+L +A    + I Q+DV  AFL G L + ++MS+P GFI + +   VCKL +++Y
Sbjct: 1045 TSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALY 1104

Query: 484  GLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGND---- 543
            GLKQA ++W +     + + GF  +V +  L+       + ++++YVDDIL  GND    
Sbjct: 1105 GLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLL 1164

Query: 544  ------------------MGYLTDVKAWH---GVHLSKEQ------------------CP 603
                              + Y   ++A     G+HLS+ +                   P
Sbjct: 1165 HNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTP 1224

Query: 604  KTPQEVEDMRR-------IPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTA 663
              P     +           Y   VGSL Y +  TRPDI YAV  +S++   P  +H  A
Sbjct: 1225 MAPSPKLSLYSGTKLTDPTEYRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQA 1284

Query: 664  VKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 665
            +K IL+YL  T ++ + +     L L  Y+D+D+  DKD   ST G +  L    + W S
Sbjct: 1285 LKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSS 1344

[Close]

BLAST of Cmc06g0159661 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.1e-77
Identity = 225/843 (26.69%), Postives = 362/843 (42.94%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVS-ETPFELWRGRKPS 63
            SER+++ +++M  +++S+A +P ++W YA   AV+++N  P+  +  ++PF+   G+ P+
Sbjct: 604  SERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPN 663

Query: 64   LSHFRIWGCPTHVLVT--NPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATF 123
                +++GC  +  +   N  KL+ +S+ C F+GY       L       R++ S +  F
Sbjct: 664  YEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQF 723

Query: 124  LEE----------------------DHMRNHK--PRSKLVL------------------S 183
             E                        +  +H   P + LVL                  S
Sbjct: 724  DERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSS 783

Query: 184  EATDKSTRVVDEVGPSSRVDETTTSGQSHPSQS--------------------LRMPRRS 243
             +   +T+V     PSS +   ++S  + PS +                    L  P  +
Sbjct: 784  PSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPN 843

Query: 244  GRVVSQPNRYLGL----------------------------------------------- 303
                + PN+   L                                               
Sbjct: 844  SPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNA 903

Query: 304  -----TETQAVIPDDGVEDP---LSY----------KQAMNDVDKDQWVKAMDLEMESMY 363
                 T + A    DG+  P    SY          + A+  +  D+W +AM  E+ +  
Sbjct: 904  QAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQI 963

Query: 364  FNLVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSP 423
             N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY QR  +DY ETFSP
Sbjct: 964  GNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSP 1023

Query: 424  VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLN 483
            V    SIRI+L +A    + I Q+DV  AFL G L + ++MS+P GF+ + +   VC+L 
Sbjct: 1024 VIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLR 1083

Query: 484  RSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGN- 543
            ++IYGLKQA ++W +     + + GF  ++ +  L+       + ++++YVDDIL  GN 
Sbjct: 1084 KAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGND 1143

Query: 544  ---------------------DMGYLTDVKAW---HGVHLSKEQCP-------------- 603
                                 D+ Y   ++A     G+HLS+ +                
Sbjct: 1144 TVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKP 1203

Query: 604  -KTPQ------EVEDMRRIP----YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLD 663
              TP        +    ++P    Y   VGSL Y +  TRPD+ YAV  +S+Y   P  D
Sbjct: 1204 VATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDD 1263

Query: 664  HWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAV 665
            HW A+K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST G +  L    +
Sbjct: 1264 HWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPI 1323

[Close]

BLAST of Cmc06g0159661 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.0e-29
Identity = 66/133 (49.62%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 442 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYM 501
           M+ +PY SAVG++MY M+ TRPD+  AVG++S++ S+P   HW A+K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 502 LVY-GAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 561
           L +  A    L GY+D+D+  D +SR+ST G +F LNGG V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 562 VAACEAVKEAVWL 574
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Cmc06g0159661 vs. ExPASy TrEMBL
Match: A0A5A7SIN2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G00060 PE=4 SV=1)

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0


Query: 33   VETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQF 92
            VETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQF
Sbjct: 366  VETAVHILNNAPSKSVSETPFELWRGRKPSLSHFRIWGCPTHVLVTNPKKLKSRSRLCQF 425

Query: 93   VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVG 152
            VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVG
Sbjct: 426  VGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDKSTRVVDEVG 485

Query: 153  PSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQA 212
            PSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQA
Sbjct: 486  PSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQA 545

Query: 213  MNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKAR 272
            MNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKAR
Sbjct: 546  MNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKAR 605

Query: 273  LVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF 332
            LVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF
Sbjct: 606  LVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIF 665

Query: 333  MSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKIN 392
            MSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKIN
Sbjct: 666  MSKPEGFITRGQEQKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFDQNVDEPCLYKKIN 725

Query: 393  KGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVG 452
            KGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVG
Sbjct: 726  KGKVAFLVLYVDDILFIGNDMGYLTDVKAWHGVHLSKEQCPKTPQEVEDMRRIPYASAVG 785

Query: 453  SLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILT 512
            SLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILT
Sbjct: 786  SLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILT 845

Query: 513  GYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVW 572
            GYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVW
Sbjct: 846  GYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVKEAVW 905

Query: 573  LRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGI 632
            LRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGI
Sbjct: 906  LRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIREIVQRGDGI 965

Query: 633  VTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR 671
            VTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR
Sbjct: 966  VTKIASEHNIADPFTKTLTAKVFEGHLKSLGLRDMYIR 1003

[Close]

BLAST of Cmc06g0159661 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 642/725 (88.55%), Postives = 652/725 (89.93%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSL 63
            SERRN+TLLDMV SMMSYAQLPSSFWGYAVETAVHILNN PSKSVSETPFELWRGRKPSL
Sbjct: 511  SERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSL 570

Query: 64   SHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 123
            SHFRIWGCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE
Sbjct: 571  SHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 630

Query: 124  DHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 183
            DHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS
Sbjct: 631  DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 690

Query: 184  QPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDL 243
            QPNRYLGLTETQ VIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFN VWELVDL
Sbjct: 691  QPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL 750

Query: 244  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILL 303
            PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRE VDYEETFSPVAMLKSIRILL
Sbjct: 751  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 810

Query: 304  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASK 363
            SIATFYDYEIWQMDVKTAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+
Sbjct: 811  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 870

Query: 364  SWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW- 423
            SWNIRFD AIKSYGFDQNVDEPC+YKKINKGKVAFLVLYVDDIL IGND+GYLTDVKAW 
Sbjct: 871  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 930

Query: 424  ---------------------------------------------------------HGV 483
                                                                     HGV
Sbjct: 931  AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 990

Query: 484  HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 543
            HLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT
Sbjct: 991  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 1050

Query: 544  AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 603
            AVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKST GSVFTLNGGAVVWRS
Sbjct: 1051 AVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS 1110

Query: 604  IKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKE 663
            IKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVVPNMNLPITLY DNS AVANSKE
Sbjct: 1111 IKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKE 1170

Query: 664  PRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLR 671
            PRSHKRGKHIERKYHLIREIVQRGD IVTKIASEHNIADPFTKTLTAKVFEGHL+SLGLR
Sbjct: 1171 PRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLR 1230

[Close]

BLAST of Cmc06g0159661 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1283.1 bits (3319), Expect = 0.0e+00
Identity = 642/725 (88.55%), Postives = 652/725 (89.93%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSL 63
            SERRN+TLLDMV SMMSYAQLPSSFWGYAVETAVHILNN PSKSVSETPFELWRGRKPSL
Sbjct: 385  SERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSL 444

Query: 64   SHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 123
            SHFRIWGCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE
Sbjct: 445  SHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 504

Query: 124  DHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 183
            DHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS
Sbjct: 505  DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 564

Query: 184  QPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDL 243
            QPNRYLGLTETQ VIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFN VWELVDL
Sbjct: 565  QPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL 624

Query: 244  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILL 303
            PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRE VDYEETFSPVAMLKSIRILL
Sbjct: 625  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 684

Query: 304  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASK 363
            SIATFYDYEIWQMDVKTAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+
Sbjct: 685  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 744

Query: 364  SWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW- 423
            SWNIRFD AIKSYGFDQNVDEPC+YKKINKGKVAFLVLYVDDIL IGND+GYLTDVKAW 
Sbjct: 745  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 804

Query: 424  ---------------------------------------------------------HGV 483
                                                                     HGV
Sbjct: 805  AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 864

Query: 484  HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 543
            HLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT
Sbjct: 865  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 924

Query: 544  AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 603
            AVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKST GSVFTLNGGAVVWRS
Sbjct: 925  AVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS 984

Query: 604  IKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKE 663
            IKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVVPNMNLPITLY DNS AVANSKE
Sbjct: 985  IKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKE 1044

Query: 664  PRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLR 671
            PRSHKRGKHIERKYHLIREIVQRGD IVTKIASEHNIADPFTKTLTAKVFEGHL+SLGLR
Sbjct: 1045 PRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLR 1104

[Close]

BLAST of Cmc06g0159661 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 635/725 (87.59%), Postives = 649/725 (89.52%), Query Frame = 0


Query: 4    SERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSL 63
            SERRN+TLLDMV SMMSYAQLPSSFWGYAVETAVHILNN PSKSVSETPFELWRGRKPSL
Sbjct: 511  SERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSL 570

Query: 64   SHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE 123
            SHFRIWGCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDP+ENRVFVSTNATFLEE
Sbjct: 571  SHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEE 630

Query: 124  DHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 183
            DHMRNHKPRSKLVLSEATD+STRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS
Sbjct: 631  DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 690

Query: 184  QPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDL 243
            QPNRYLGLTETQ VIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFN VWELVDL
Sbjct: 691  QPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDL 750

Query: 244  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILL 303
            PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++E VDYEETFS VAMLKSIRILL
Sbjct: 751  PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILL 810

Query: 304  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASK 363
            SIA FYDYEIWQMDVKTAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+
Sbjct: 811  SIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 870

Query: 364  SWNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW- 423
            SWNIRFD AIKSYGFDQNVDEPC+YKKINKGKVAFLVLYVDDIL IGND+GYLTDVKAW 
Sbjct: 871  SWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWL 930

Query: 424  ---------------------------------------------------------HGV 483
                                                                     HGV
Sbjct: 931  AAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGV 990

Query: 484  HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 543
            HLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT
Sbjct: 991  HLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT 1050

Query: 544  AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRS 603
            AVKIILKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKST  SVFTLNGGAVVWRS
Sbjct: 1051 AVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRS 1110

Query: 604  IKQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKE 663
            IKQGCIADSTMEAEYVAACEA KEAVWL+KFLHDLEVVPNMNLPITLY DNS AVANSKE
Sbjct: 1111 IKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKE 1170

Query: 664  PRSHKRGKHIERKYHLIREIVQRGDGIVTKIASEHNIADPFTKTLTAKVFEGHLKSLGLR 671
            PRSHKRGKHIERKYHLIREIVQRGD IVTKIASEHNIADPFTKTLTAKVFEGHL+SLGLR
Sbjct: 1171 PRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLR 1230

[Close]

BLAST of Cmc06g0159661 vs. ExPASy TrEMBL
Match: A0A5D3CZY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00460 PE=4 SV=1)

HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 572/681 (83.99%), Postives = 597/681 (87.67%), Query Frame = 0


Query: 5   ERRNKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVSETPFELWRGRKPSLS 64
           ERRN+T+LDMV SMMSYAQLPSSFWGYAVETAVHILNN  SKSVSETPFELWRGRKPSLS
Sbjct: 122 ERRNRTMLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWRGRKPSLS 181

Query: 65  HFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEED 124
           HF+I GCP HVLVTNPKKL+ RSRLCQFVGYPKETRGGLFFDPQ+NRV VSTNATFLEED
Sbjct: 182 HFKILGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTNATFLEED 241

Query: 125 HMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQ 184
           HMR+HKP++KLVL+EA D+STRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VSQ
Sbjct: 242 HMRDHKPQNKLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRRSGRIVSQ 301

Query: 185 PNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDLP 244
           PNRYLGLTETQ VIPDDGVEDPLSY QAMNDVDKDQWVKAMDLEMESMYFNL+WELVDLP
Sbjct: 302 PNRYLGLTETQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLMWELVDLP 361

Query: 245 EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILLS 304
           EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRE VDYEETFSPVAMLKSIRILLS
Sbjct: 362 EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLS 421

Query: 305 IATFYDYEIWQMDVKTAFLNGNLEESIFMSKPEGFITRGQEQKVCKLNRSIYGLKQASKS 364
           IATFYDYEIW+MDV TAFLNGNLEESIFMS+PEGFIT+GQEQKVCKLNRSIYGLKQAS+S
Sbjct: 422 IATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRS 481

Query: 365 WNIRFDIAIKSYGFDQNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKAW-- 424
           WNIRFD AIKSYGF+QNVDEPC+YKKINKGKV FLVLYVDDIL IGND+GYLTDVKAW  
Sbjct: 482 WNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLTDVKAWLA 541

Query: 425 --------------------------------------------------------HGVH 484
                                                                   HGVH
Sbjct: 542 AQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVH 601

Query: 485 LSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTA 544
           LSKEQCPKTPQEVEDMRRIPYASAVGSLMY + CTR +ICYAV IVSRYQSN GLDHWTA
Sbjct: 602 LSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVSRYQSNLGLDHWTA 661

Query: 545 VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSI 604
           VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQT+KDSRKST  SVFTLNGGA+VWRSI
Sbjct: 662 VKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTNKDSRKSTSRSVFTLNGGAIVWRSI 721

Query: 605 KQGCIADSTMEAEYVAACEAVKEAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEP 628
           KQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVVPNMNLPITLY DNS AVANSKEP
Sbjct: 722 KQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEP 781

[Close]

BLAST of Cmc06g0159661 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 259.2 bits (661), Expect = 9.0e-69
Identity = 156/476 (32.77%), Postives = 250/476 (52.52%), Query Frame = 0


Query: 204 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNLVWELVDLPEGVKPIGCKWIYKRKRDSA 263
           ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 264 GKVQTFKARLVAKGYTQRERVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 323
           G ++ +KARLVAKGYTQ+E +D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 324 NGNLEESIFMSKPEGFITRGQE----QKVCKLNRSIYGLKQASKSWNIRFDIAIKSYGFD 383
           NG+L+E I+M  P G+  R  +      VC L +SIYGLKQAS+ W ++F + +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 384 QNVDEPCLYKKINKGKVAFLVLYVDDILFIGNDMGYLTDVKA----------------WH 443
           Q+  +   + KI       +++YVDDI+   N+   + ++K+                + 
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 444 GVHLSK---------------------------EQCPKTPQEV-------EDMRRIPYAS 503
           G+ +++                              P  P          + +    Y  
Sbjct: 324 GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 383

Query: 504 AVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK-D 563
            +G LMY  + TR DI +AV  +S++   P L H  AV  IL Y++ T    L Y ++ +
Sbjct: 384 LIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 443

Query: 564 LILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAVK 623
           + L  ++D+ FQ+ KD+R+ST G    L    + W+S KQ  ++ S+ EAEY A   A  
Sbjct: 444 MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 503

Query: 624 EAVWLRKFLHDLEVVPNMNLPITLYYDNSEAVANSKEPRSHKRGKHIERKYHLIRE 625
           E +WL +F  +L++   ++ P  L+ DN+ A+  +     H+R KHIE   H +RE
Sbjct: 504 EMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc06g0159661 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-14
Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 174 MPRRSGRVVSQPNRYLGLTETQAVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 233
           M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++ 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60

Query: 234 FNLVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQRERVDYEETFSPV 293
            N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q E + + ET+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 294 AMLKSIRILLSIA 307
               +IR +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]

BLAST of Cmc06g0159661 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 4.2e-10
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 447 YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYG 506
           + S VG+L Y  L TRPDI YAV IV +    P L  +  +K +L+Y++ T  + + ++ 
Sbjct: 100 FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 507 AKDLILTGYTDSDFQTDKDSRKSTLGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACE 566
              L +  + DSD+     +R+ST G    L    + W + +Q  ++ S+ E EY A   
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALAL 219

Query: 567 AVKEAVW 573
              E  W
Sbjct: 220 TAAELTW 225

[Close]

BLAST of Cmc06g0159661 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-07
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 8  NKTLLDMVSSMMSYAQLPSSFWGYAVETAVHILNNAPSKSVS-ETPFELWRGRKPSLSHF 67
          N+T+++ V SM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ 
Sbjct: 2  NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 68 RIWGCPTHVLVTNPKKLKSRSR 89
          R +GC  ++   +  KLK R++
Sbjct: 62 RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of Cmc06g0159661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025159.1	0.0e+00	100.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	0.0e+00	88.55	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	0.0e+00	88.55	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	0.0e+00	87.59	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033121.1	0.0e+00	83.99	gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc06g0159661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.6e-134	37.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.0e-90	29.20	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	5.1e-77	26.70	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.1e-77	26.69	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	3.0e-29	49.62	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc06g0159661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIN2	0.0e+00	100.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G000...	[more]
A0A5A7TZD0	0.0e+00	88.55	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	0.0e+00	88.55	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	0.0e+00	87.59	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3CZY3	0.0e+00	83.99	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G004...	[more]

BLAST of Cmc06g0159661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	9.0e-69	32.77	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	4.8e-14	35.34	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	4.2e-10	31.50	DNA/RNA polymerases superfamily protein	[more]
ATMG00710.1	1.5e-07	35.37	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 235..421 e-value: 3.9E-60 score: 203.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 3..75 e-value: 1.7E-10 score: 42.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..177
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 203..444 coord: 3..181
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 512..653 e-value: 2.28714E-61 score: 199.232
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..68
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 235..620

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0159661.1	Cmc06g0159661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding