Cmc06g0159331 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0159331
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr06: 7588220 .. 7588684 (+)
RNA-Seq Expression	Cmc06g0159331
Synteny	Cmc06g0159331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTCGGTTTGACCAACGCACCGGCAACCTTCCAATCCCTAATGAACCAGATTTTTCGGCCGTTCTTGCGGAGATTTGTACTAGTGTTTTTCGACGACATACTGATTTATAGTAAGGACATTACGGAACATGAGAAGCATCTGGGAGTAGTTTTTAACGTGATGAAGGACAATCGGTTATTTGCCAACGAAAAGAAGTGCGTGATCGGGCATTCAAGAGTTAATTATTTGGGCCATTGGATATCAAAAAAAGGGGTAGAAGCCGATGGTGAGAAGGTGAAAACAATGGTGAACTGGCCTCAACCAACTAACGTCTCAGAGCTGAGAGGGTTCCTTGGATTGACGGGATACTATCGGAGGTTCGTCAAGAATTACGGAAACATTGCGGCGCCACTAAGCAAATTACTACAGAAAATGGGTTCCAATGGAGTGACGATGCCATGGCAGCCTTCGAATCATTAA

mRNA sequence

ATGCCATTCGGTTTGACCAACGCACCGGCAACCTTCCAATCCCTAATGAACCAGATTTTTCGGCCGTTCTTGCGGAGATTTGTACTAGTGTTTTTCGACGACATACTGATTTATAGTAAGGACATTACGGAACATGAGAAGCATCTGGGAGTAGTTTTTAACGTGATGAAGGACAATCGGTTATTTGCCAACGAAAAGAAGTGCGTGATCGGGCATTCAAGAGTTAATTATTTGGGCCATTGGATATCAAAAAAAGGGGTAGAAGCCGATGGTGAGAAGGTGAAAACAATGGTGAACTGGCCTCAACCAACTAACGTCTCAGAGCTGAGAGGGTTCCTTGGATTGACGGGATACTATCGGAGGTTCGTCAAGAATTACGGAAACATTGCGGCGCCACTAAGCAAATTACTACAGAAAATGGGTTCCAATGGAGTGACGATGCCATGGCAGCCTTCGAATCATTAA

Coding sequence (CDS)

ATGCCATTCGGTTTGACCAACGCACCGGCAACCTTCCAATCCCTAATGAACCAGATTTTTCGGCCGTTCTTGCGGAGATTTGTACTAGTGTTTTTCGACGACATACTGATTTATAGTAAGGACATTACGGAACATGAGAAGCATCTGGGAGTAGTTTTTAACGTGATGAAGGACAATCGGTTATTTGCCAACGAAAAGAAGTGCGTGATCGGGCATTCAAGAGTTAATTATTTGGGCCATTGGATATCAAAAAAAGGGGTAGAAGCCGATGGTGAGAAGGTGAAAACAATGGTGAACTGGCCTCAACCAACTAACGTCTCAGAGCTGAGAGGGTTCCTTGGATTGACGGGATACTATCGGAGGTTCGTCAAGAATTACGGAAACATTGCGGCGCCACTAAGCAAATTACTACAGAAAATGGGTTCCAATGGAGTGACGATGCCATGGCAGCCTTCGAATCATTAA

Protein sequence

MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNRLFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYRRFVKNYGNIAAPLSKLLQKMGSNGVTMPWQPSNH

Homology

[Close]

BLAST of Cmc06g0159331 vs. NCBI nr
Match: KAA0062448.1 (disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 4.6e-71
Identity = 131/141 (92.91%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSK+ITEHEKHLGVVFNVMKDN+
Sbjct: 572 MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQ 631

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFANEKKC+IGHSR+NYLGHWISKKGVEADGEKVK+MVNWPQPT+VSELRGFLGLTGYY+
Sbjct: 632 LFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQ 691

Query: 121 RFVKNYGNIAAPLSKLLQKMG 142
           RFVKNYGNI APL+KLLQK G
Sbjct: 692 RFVKNYGNIVAPLTKLLQKNG 712

[Close]

BLAST of Cmc06g0159331 vs. NCBI nr
Match: TYK27437.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 4.6e-71
Identity = 131/141 (92.91%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSK+ITEHEKHLGVVFNVMKDN+
Sbjct: 723 MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQ 782

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFANEKKC+IGHSR+NYLGHWISKKGVEADGEKVK+MVNWPQPT+VSELRGFLGLTGYY+
Sbjct: 783 LFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQ 842

Query: 121 RFVKNYGNIAAPLSKLLQKMG 142
           RFVKNYGNI APL+KLLQK G
Sbjct: 843 RFVKNYGNIVAPLTKLLQKNG 863

[Close]

BLAST of Cmc06g0159331 vs. NCBI nr
Match: TYK23012.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDD+LIYSKDI EHEKHLG VFNVMKDNR
Sbjct: 562 MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDVLIYSKDIMEHEKHLGEVFNVMKDNR 621

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFANEKKCVIGHSRVNYLGHWISKKGVE DGEKVKTMVNWPQPTNVSELRGFLGLTGYYR
Sbjct: 622 LFANEKKCVIGHSRVNYLGHWISKKGVEVDGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 681

[Close]

BLAST of Cmc06g0159331 vs. NCBI nr
Match: TYJ98821.1 (disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 111/139 (79.86%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQ+F+PFLRR VLVFF DILIY  DITEHEKHLG+VF V++DNR
Sbjct: 23  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILIYGADITEHEKHLGMVFFVLRDNR 82

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFAN+KKCVI HS++ YLGH IS KGVEAD EK+K+M+NWPQP N + LRGFLGLTGYYR
Sbjct: 83  LFANKKKCVIAHSKIQYLGHQISSKGVEADEEKIKSMINWPQPKNGTRLRGFLGLTGYYR 142

Query: 121 RFVKNYGNIAAPLSKLLQK 140
           RFVK YG IAAPL+KLLQK
Sbjct: 143 RFVKGYGEIAAPLTKLLQK 161

[Close]

BLAST of Cmc06g0159331 vs. NCBI nr
Match: TYK03701.1 (disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-58
Identity = 108/139 (77.70%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNA ATFQSLMNQ+F+PFLRR VLVFFDDIL+YS DI+EHEKHLG+VF V++DN+
Sbjct: 100 MPFGLTNALATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGIVFAVLRDNQ 159

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           L+AN+KKCV  HSR+ YLGH ISK GVEAD +K+++MVNWP+P+NVSELRGFLGLTGYYR
Sbjct: 160 LYANQKKCVFAHSRIQYLGHQISKTGVEADEDKIRSMVNWPRPSNVSELRGFLGLTGYYR 219

Query: 121 RFVKNYGNIAAPLSKLLQK 140
           RFVK Y NIA PL+KLLQK
Sbjct: 220 RFVKGYSNIATPLTKLLQK 238

[Close]

BLAST of Cmc06g0159331 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.7e-32
Identity = 65/139 (46.76%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGL NAPATFQ  MN I RP L +  LV+ DDI+I+S  +TEH   + +VF  + D  
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           L     KC       N+LGH ++  G++ +  KVK +V++P PT   E+R FLGLTGYYR
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFVKNYGNIAAPLSKLLQK 140
           +F+ NY +IA P++  L+K
Sbjct: 453 KFIPNYADIAKPMTSCLKK 471

[Close]

BLAST of Cmc06g0159331 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-30
Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGL NAPATFQ  MN I RP L +  LV+ DDI+++S  + EH + LG+VF  +    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           L     KC        +LGH ++  G++ + EK++ +  +P PT   E++ FLGLTGYYR
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFVKNYGNIAAPLSKLLQKMGSNGVTMP 149
           +F+ N+ +IA P++K L+K      T P
Sbjct: 454 KFIPNFADIAKPMTKCLKKNMKIDTTNP 481

[Close]

BLAST of Cmc06g0159331 vs. ExPASy Swiss-Prot
Match: P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 48  HLGVVFNVMKDNRLFANEKKCVIGHSRVNYLG--HWISKKGVEADGEKVKTMVNWPQPTN 107
           HLG+V  + + ++ +AN KKC  G  ++ YLG  H IS +GV AD  K++ MV WP+P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSELRGFLGLTGYYRRFVKNYGNIAAPLSKLLQK 140
            +ELRGFLGLTGYYRRFVKNYG I  PL++LL+K
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK 96

[Close]

BLAST of Cmc06g0159331 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-25
Identity = 53/143 (37.06%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           +PFGL NAPA FQ +++ I R  + +   V+ DDI+++S+D   H K+L +V   +    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           L  N +K     ++V +LG+ ++  G++AD +KV+ +   P PT+V EL+ FLG+T YYR
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYR 369

Query: 121 RFVKNYGNIAAPLSKLLQKMGSN 144
           +F+++Y  +A PL+ L + + +N
Sbjct: 370 KFIQDYAKVAKPLTNLTRGLYAN 392

[Close]

BLAST of Cmc06g0159331 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MP+G++ APA FQ  +N I        V+ + DDILI+SK  +EH KH+  V   +K+  
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           L  N+ KC    S+V ++G+ IS+KG     E +  ++ W QP N  ELR FLG   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVKNYGNIAAPLSKLLQKMGSNGVTMPWQPS 153
           +F+     +  PL+ LL+K     V   W P+
Sbjct: 654 KFIPKTSQLTHPLNNLLKK----DVRWKWTPT 681

[Close]

BLAST of Cmc06g0159331 vs. ExPASy TrEMBL
Match: A0A5D3DUJ0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001340 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.2e-71
Identity = 131/141 (92.91%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSK+ITEHEKHLGVVFNVMKDN+
Sbjct: 723 MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQ 782

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFANEKKC+IGHSR+NYLGHWISKKGVEADGEKVK+MVNWPQPT+VSELRGFLGLTGYY+
Sbjct: 783 LFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQ 842

Query: 121 RFVKNYGNIAAPLSKLLQKMG 142
           RFVKNYGNI APL+KLLQK G
Sbjct: 843 RFVKNYGNIVAPLTKLLQKNG 863

[Close]

BLAST of Cmc06g0159331 vs. ExPASy TrEMBL
Match: A0A5A7V4D8 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00260 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.2e-71
Identity = 131/141 (92.91%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSK+ITEHEKHLGVVFNVMKDN+
Sbjct: 572 MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQ 631

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFANEKKC+IGHSR+NYLGHWISKKGVEADGEKVK+MVNWPQPT+VSELRGFLGLTGYY+
Sbjct: 632 LFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQ 691

Query: 121 RFVKNYGNIAAPLSKLLQKMG 142
           RFVKNYGNI APL+KLLQK G
Sbjct: 692 RFVKNYGNIVAPLTKLLQKNG 712

[Close]

BLAST of Cmc06g0159331 vs. ExPASy TrEMBL
Match: A0A5D3DHI3 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001210 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDD+LIYSKDI EHEKHLG VFNVMKDNR
Sbjct: 562 MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDVLIYSKDIMEHEKHLGEVFNVMKDNR 621

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFANEKKCVIGHSRVNYLGHWISKKGVE DGEKVKTMVNWPQPTNVSELRGFLGLTGYYR
Sbjct: 622 LFANEKKCVIGHSRVNYLGHWISKKGVEVDGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 681

[Close]

BLAST of Cmc06g0159331 vs. ExPASy TrEMBL
Match: A0A5D3BJD8 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00090 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59
Identity = 111/139 (79.86%), Postives = 124/139 (89.21%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNAPATFQSLMNQ+F+PFLRR VLVFF DILIY  DITEHEKHLG+VF V++DNR
Sbjct: 23  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILIYGADITEHEKHLGMVFFVLRDNR 82

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           LFAN+KKCVI HS++ YLGH IS KGVEAD EK+K+M+NWPQP N + LRGFLGLTGYYR
Sbjct: 83  LFANKKKCVIAHSKIQYLGHQISSKGVEADEEKIKSMINWPQPKNGTRLRGFLGLTGYYR 142

Query: 121 RFVKNYGNIAAPLSKLLQK 140
           RFVK YG IAAPL+KLLQK
Sbjct: 143 RFVKGYGEIAAPLTKLLQK 161

[Close]

BLAST of Cmc06g0159331 vs. ExPASy TrEMBL
Match: A0A5D3BVG3 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00650 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 108/139 (77.70%), Postives = 126/139 (90.65%), Query Frame = 0


Query: 1   MPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKDITEHEKHLGVVFNVMKDNR 60
           MPFGLTNA ATFQSLMNQ+F+PFLRR VLVFFDDIL+YS DI+EHEKHLG+VF V++DN+
Sbjct: 100 MPFGLTNALATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGIVFAVLRDNQ 159

Query: 61  LFANEKKCVIGHSRVNYLGHWISKKGVEADGEKVKTMVNWPQPTNVSELRGFLGLTGYYR 120
           L+AN+KKCV  HSR+ YLGH ISK GVEAD +K+++MVNWP+P+NVSELRGFLGLTGYYR
Sbjct: 160 LYANQKKCVFAHSRIQYLGHQISKTGVEADEDKIRSMVNWPRPSNVSELRGFLGLTGYYR 219

Query: 121 RFVKNYGNIAAPLSKLLQK 140
           RFVK Y NIA PL+KLLQK
Sbjct: 220 RFVKGYSNIATPLTKLLQK 238

[Close]

BLAST of Cmc06g0159331 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-27
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 48  HLGVVFNVMKDNRLFANEKKCVIGHSRVNYLG--HWISKKGVEADGEKVKTMVNWPQPTN 107
           HLG+V  + + ++ +AN KKC  G  ++ YLG  H IS +GV AD  K++ MV WP+P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSELRGFLGLTGYYRRFVKNYGNIAAPLSKLLQK 140
            +ELRGFLGLTGYYRRFVKNYG I  PL++LL+K
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK 96

The following BLAST results are available for this feature:

BLAST of Cmc06g0159331 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062448.1	4.6e-71	92.91	disease resistance protein [Cucumis melo var. makuwa]	[more]
TYK27437.1	4.6e-71	92.91	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23012.1	2.5e-61	96.67	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98821.1	1.5e-58	79.86	disease resistance protein [Cucumis melo var. makuwa]	[more]
TYK03701.1	2.6e-58	77.70	disease resistance protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0159331 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	9.7e-32	46.76	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	4.1e-30	41.89	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P92523	1.0e-25	56.38	Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8I7P9	5.2e-25	37.06	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	9.8e-24	37.50	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc06g0159331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUJ0	2.2e-71	92.91	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V4D8	2.2e-71	92.91	Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3DHI3	1.2e-61	96.67	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3BJD8	7.4e-59	79.86	Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5D3BVG3	1.3e-58	77.70	Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Cmc06g0159331 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	7.4e-27	56.38	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..82 e-value: 1.9E-18 score: 66.8
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 14.164359
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 91..153 e-value: 8.1E-18 score: 66.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 1.3E-31 score: 111.2
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 17..140
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 17..140
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..80 e-value: 4.40615E-38 score: 126.171
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0159331.1	Cmc06g0159331.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding