Cmc06g0158641 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAGCACAACACCCTTATGCACCCATTCCATAGGTGTAGTTGGTGTATTCAAGGGCTCCCTGTTCAGTCCTATGCATGGTTCCTTGATCACTTTTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATTCAGGTTACAGATTCAGTCAAGAGGAAGAAACTGAGAATATCATAGCTGCTCATGGTTATTTTGGTCGATTGATCTTCCACTATGCTAGTTTCGACAACTCTCGTTCTTTACATTTCTTCCTAGCTATTTGGCCTGTAGTAGGTATCTGGTTTACCGTAAAGGTATTAGTAGTATGGTTTTCAACTGAAATGGTTTCAATTTCAACCAATCTGTAG ATGCTGAGCACAACACCCTTATGCACCCATTCCATAGGTGTAGTTGGTGTATTCAAGGGCTCCCTGTTCAGTCCTATGCATGGTTCCTTGATCACTTTTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATTCAGGTTACAGATTCAGTCAAGAGGAAGAAACTGAGAATATCATAGCTGCTCATGGTTATTTTGGTCGATTGATCTTCCACTATGCTAGTTTCGACAACTCTCGTTCTTTACATTTCTTCCTAGCTATTTGGCCTGTAGTAGGTATCTGGTTTACCGTAAAGGTATTAGTAGTATGGTTTTCAACTGAAATGGTTTCAATTTCAACCAATCTGTAG ATGCTGAGCACAACACCCTTATGCACCCATTCCATAGGTGTAGTTGGTGTATTCAAGGGCTCCCTGTTCAGTCCTATGCATGGTTCCTTGATCACTTTTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATTCAGGTTACAGATTCAGTCAAGAGGAAGAAACTGAGAATATCATAGCTGCTCATGGTTATTTTGGTCGATTGATCTTCCACTATGCTAGTTTCGACAACTCTCGTTCTTTACATTTCTTCCTAGCTATTTGGCCTGTAGTAGGTATCTGGTTTACCGTAAAGGTATTAGTAGTATGGTTTTCAACTGAAATGGTTTCAATTTCAACCAATCTGTAG MLSTTPLCTHSIGVVGVFKGSLFSPMHGSLITFSLIRESTENESANSGYRFSQEEETENIIAAHGYFGRLIFHYASFDNSRSLHFFLAIWPVVGIWFTVKVLVVWFSTEMVSISTNL Homology
BLAST of Cmc06g0158641 vs. NCBI nr
Match: AYN76324.1 (photosystem II protein D1, partial [uncultured eukaryote]) HSP 1 Score: 156.0 bits (393), Expect = 2.0e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. NCBI nr
Match: YP_009646179.1 (D1 reaction center protein of photosystem II [Chloropicon laureae] >QBX97699.1 D1 reaction center protein of photosystem II [Chloropicon laureae]) HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. NCBI nr
Match: YP_009629536.1 (D1 reaction center protein of photosystem II [Chlorococcum tatrense] >AYQ94320.1 D1 reaction center protein of photosystem II [Chlorococcum tatrense]) HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. NCBI nr
Match: ALO63125.1 (D1 reaction center protein of photosystem II [Chloromonas perforata]) HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. NCBI nr
Match: AYQ95076.1 (D1 reaction center protein of photosystem II [Protosiphon botryoides]) HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy Swiss-Prot
Match: Q9MUW0 (Photosystem II protein D1 OS=Mesostigma viride OX=41882 GN=psbA PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy Swiss-Prot
Match: Q70Y17 (Photosystem II protein D1 OS=Amborella trichopoda OX=13333 GN=psbA PE=3 SV=2) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy Swiss-Prot
Match: Q7YJY8 (Photosystem II protein D1 OS=Calycanthus floridus var. glaucus OX=212734 GN=psbA PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy Swiss-Prot
Match: A6MMA2 (Photosystem II protein D1 OS=Chloranthus spicatus OX=13006 GN=psbA PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy Swiss-Prot
Match: Q09MJ8 (Photosystem II protein D1 OS=Citrus sinensis OX=2711 GN=psbA PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-36 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy TrEMBL
Match: A0A3G2LSG7 (Photosystem II protein D1 (Fragment) OS=uncultured eukaryote OX=100272 GN=psbA PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 9.7e-35 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy TrEMBL
Match: A0A0S2LNQ7 (Photosystem II protein D1 OS=Chloromonas perforata OX=51730 GN=psbA PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy TrEMBL
Match: A0A4D6C3T7 (Photosystem II protein D1 OS=Chloropicon laureae OX=464258 GN=psbA PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.7e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy TrEMBL
Match: F1KBW8 (Photosystem II protein D1 OS=Alangium platanifolium OX=60116 GN=psbA PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.2e-34 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. ExPASy TrEMBL
Match: A0A3G2LRL4 (Photosystem II protein D1 (Fragment) OS=uncultured eukaryote OX=100272 GN=psbA PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34 Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Cmc06g0158641 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A ) HSP 1 Score: 152.9 bits (385), Expect = 1.6e-37 Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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