Cmc06g0153951 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0153951
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr06: 3883926 .. 3884565 (-)
RNA-Seq Expression	Cmc06g0153951
Synteny	Cmc06g0153951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGCATGATTTATTCAATAAATGAATGTGAATGATTAAAAATGCATCAAAATCCCTCTTGTCTAAGCTTAAAAAAAAAAAAGAGGGACCAAGATCAAAACCAACACAAATCCTTTGCTCTTTCTAATATTCCCTCTACATGAAGTGAAAGACATTTTCCCTCCACTTCTCTTCTCCAAATGGGGTGGCTCCAATCCCTATTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAGTCACTTCCCTTTCCGAACTCAGTTTCATTTAGTCACTTACATTCTCTGTTTCTCTCTTTTTGCCTTCTACAACGCCACCATTTCCCCTTCTCTTTCTGTTCTTTCACTTGAAAATTGTGCAGGAAAGAAAAGAATCTCTTCAAAATGCTTTGAAGTTCAAGTTCTTTCTTTTTTTTTTGGTTCATAGTTTTTGGGTAAATTTGATGCAGGAAGAGGAATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAACAATGAAGCTTTCAAGTTTCATCATCCTAAATACACAATTTCTCCACCAATGTACATAAAATATTTA

mRNA sequence

AATGCATGATTTATTCAATAAATGAATGTGAATGATTAAAAATGCATCAAAATCCCTCTTGTCTAAGCTTAAAAAAAAAAAAGAGGGACCAAGATCAAAACCAACACAAATCCTTTGCTCTTTCTAATATTCCCTCTACATGAAGTGAAAGACATTTTCCCTCCACTTCTCTTCTCCAAATGGGGTGGCTCCAATCCCTATTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGAAGAGGAATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAACAATGAAGCTTTCAAGTTTCATCATCCTAAATACACAATTTCTCCACCAATGTACATAAAATATTTA

Coding sequence (CDS)

ATGGGGTGGCTCCAATCCCTATTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGAAGAGGAATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAACAATGA

Protein sequence

MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ

Homology

[Close]

BLAST of Cmc06g0153951 vs. NCBI nr
Match: KGN56989.1 (hypothetical protein Csa_010650 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]

BLAST of Cmc06g0153951 vs. NCBI nr
Match: KAG6597448.1 (hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 5.7e-25
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP 57
          MGWLQSLFSPLKKLWFRLHSSP+KRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP 56

[Close]

BLAST of Cmc06g0153951 vs. NCBI nr
Match: PHT38775.1 (hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical protein T459_08075 [Capsicum annuum])

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of Cmc06g0153951 vs. NCBI nr
Match: KAG5587814.1 (hypothetical protein H5410_048248 [Solanum commersonii] >TMW85068.1 hypothetical protein EJD97_023849 [Solanum chilense])

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of Cmc06g0153951 vs. NCBI nr
Match: POO02187.1 (hypothetical protein TorRG33x02_019710 [Trema orientale])

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-23
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCP EDVHVLWSILVESHT LP K
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVESHT-LPTK 59

[Close]

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL
Match: A0A0A0L7K5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

[Close]

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL
Match: A0A2G2W0L8 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-25
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL
Match: A0A2G2ZVG2 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-25
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL
Match: A0A0V0GKY9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.8e-24
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

[Close]

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL
Match: M1CYA3 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.8e-24
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

Query: 61 KQ 62
          ++
Sbjct: 61 RK 62

The following BLAST results are available for this feature:

BLAST of Cmc06g0153951 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56989.1	1.1e-28	100.00	hypothetical protein Csa_010650 [Cucumis sativus]	[more]
KAG6597448.1	5.7e-25	98.21	hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PHT38775.1	1.7e-24	90.32	hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical pr...	[more]
KAG5587814.1	1.4e-23	88.71	hypothetical protein H5410_048248 [Solanum commersonii] >TMW85068.1 hypothetical...	[more]
POO02187.1	2.4e-23	93.33	hypothetical protein TorRG33x02_019710 [Trema orientale]	[more]

BLAST of Cmc06g0153951 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7K5	5.4e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1	[more]
A0A2G2W0L8	8.1e-25	90.32	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1	[more]
A0A2G2ZVG2	8.1e-25	90.32	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1	[more]
A0A0V0GKY9	6.8e-24	88.71	Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1	[more]
M1CYA3	6.8e-24	88.71	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]

BLAST of Cmc06g0153951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181:SF7	OS07G0572400 PROTEIN	coord: 1..59
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0153951.1	Cmc06g0153951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001172	transcription, RNA-templated
molecular_function	GO:0003968	RNA-directed 5'-3' RNA polymerase activity