Cmc06g0147881 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCACCAAATTTGGAGTCTAACCTAACAATTTTTAGAATTCAGTGAAAAATCTAGTTTTCTCTGGCTGAGTTCATATGAATAAATTGTATGATACTAAGCCAATTGGCATCCCAAGTTCAAGTCAGTACACAACAGAGAGAGAGAAACAGAAGGGAGAAAATGGAAAGTGAAGCAAAGCTAAGGCGGAATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATCTTTTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTCTGTTTCAATTCTCTTAACATACCCACTCAAACTCAAACTCAAACAAACTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCCCAAAACTCTCTCCTCGCATCCCCTCTCAAAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTCACAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAATGTTAATTGAGAAGGAATGGTTCTGTTGGTGGAGAAAATTGAATTTTAGGAGAAAAGGGGAAGTTGGGTCTGACTATGCTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAGAAGCAGTTCAAGGATGAAAGTTGCTGTGACCCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGAATTAGCCCTCTTCTTCTCTGATTTATATATGCATATGTTAACAATAATGATATTTTGAAGTTTATAAACATTTCCTGAGTAAACATGAGGGAATGAATGTTTTCTTCTAAAAGTCATCACCTGTTCTCCTTGATCATGCAGTTCTGTAGTTTTTCAAGCCATTTGTGATTATTAATGAAATTATTACTGTTTAACGAATTGCAGGGAAACATAGGGGAAGGGTTTAAACAGATTAACATTCCATGGAAGAGCAAAAAAGCATAAGAAAGAGCACGGGAAAATCATTAGAATGTTAATGAATAAAACCGAGTTTAGCTTGTTGTAATGTAAATGCATCAAATAATTGTAATATGGAGGAGAACTGATGACTTAGTTAATGGCTGAGATCTTATGTATTTGATATTCTTGTACAGAAATAATGTTATGAATCATACGGCTTTATGAATTGAATCATCATTTGTTTTCGACAATTTTCAAGAAGTG TGCCACCAAATTTGGAGTCTAACCTAACAATTTTTAGAATTCAGTGAAAAATCTAGTTTTCTCTGGCTGAGTTCATATGAATAAATTGTATGATACTAAGCCAATTGGCATCCCAAGTTCAAGTCAGTACACAACAGAGAGAGAGAAACAGAAGGGAGAAAATGGAAAGTGAAGCAAAGCTAAGGCGGAATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATCTTTTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTCTGTTTCAATTCTCTTAACATACCCACTCAAACTCAAACTCAAACAAACTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCCCAAAACTCTCTCCTCGCATCCCCTCTCAAAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTCACAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAATGTTAATTGAGAAGGAATGGTTCTGTTGGTGGAGAAAATTGAATTTTAGGAGAAAAGGGGAAGTTGGGTCTGACTATGCTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAGAAGCAGTTCAAGGATGAAAGTTGCTGTGACCCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATTAACATTCCATGGAAGAGCAAAAAAGCATAAGAAAGAGCACGGGAAAATCATTAGAATGTTAATGAATAAAACCGAGTTTAGCTTGTTGTAATGTAAATGCATCAAATAATTGTAATATGGAGGAGAACTGATGACTTAGTTAATGGCTGAGATCTTATGTATTTGATATTCTTGTACAGAAATAATGTTATGAATCATACGGCTTTATGAATTGAATCATCATTTGTTTTCGACAATTTTCAAGAAGTG ATGATACTAAGCCAATTGGCATCCCAAGTTCAAGTCAGTACACAACAGAGAGAGAGAAACAGAAGGGAGAAAATGGAAAGTGAAGCAAAGCTAAGGCGGAATTATGAAGTACCAAAGCTTCCATTACTTGCAATTACAGCAATGGAGTCTCCAGATCGTTCTGGAATGCTAACCCCACCAATCTTTTCCTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAACCTGGCAAGCCCAGGTTCTGTTTCAATTCTCTTAACATACCCACTCAAACTCAAACTCAAACAAACTCCCTTGAACTTCCACCAAGATTGTTACTAATGGATCCCAAAATCCCAAAACTCTCTCCTCGCATCCCCTCTCAAAAAGGGTTTTTCCAGTTTCATAAGCACTGTTGTAGCTCATTCAGATTTCACAAAACTCAGCTTGGAGCTATGGTTTTGAGAAAGAGAGGAATGTTAATTGAGAAGGAATGGTTCTGTTGGTGGAGAAAATTGAATTTTAGGAGAAAAGGGGAAGTTGGGTCTGACTATGCTGCTGTATTTCCTTCTTCTTTGGATAAGGAGAGAAGCAGTTCAAGGATGAAAGTTGCTGTGACCCAGAAAGGTGGGAGCTTTTCTTCTTGTTTTGTCCAAGCCAAGACTGAGTTTTGGGGAAACATAGGGGAAGGGTTTAAACAGATTAACATTCCATGGAAGAGCAAAAAAGCATAA MILSQLASQVQVSTQQRERNRREKMESEAKLRRNYEVPKLPLLAITAMESPDRSGMLTPPIFSSVSVPFRWEEEPGKPRFCFNSLNIPTQTQTQTNSLELPPRLLLMDPKIPKLSPRIPSQKGFFQFHKHCCSSFRFHKTQLGAMVLRKRGMLIEKEWFCWWRKLNFRRKGEVGSDYAAVFPSSLDKERSSSRMKVAVTQKGGSFSSCFVQAKTEFWGNIGEGFKQINIPWKSKKA Homology
BLAST of Cmc06g0147881 vs. NCBI nr
Match: KAA0048880.1 (uncharacterized protein E6C27_scaffold171G00950 [Cucumis melo var. makuwa]) HSP 1 Score: 439.5 bits (1129), Expect = 1.8e-119 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Cmc06g0147881 vs. NCBI nr
Match: TYK20830.1 (uncharacterized protein E5676_scaffold291G00930 [Cucumis melo var. makuwa]) HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Cmc06g0147881 vs. NCBI nr
Match: XP_004133807.2 (uncharacterized protein At4g00950 isoform X2 [Cucumis sativus]) HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111 Identity = 203/229 (88.65%), Postives = 214/229 (93.45%), Query Frame = 0
BLAST of Cmc06g0147881 vs. NCBI nr
Match: XP_011650674.1 (uncharacterized protein At4g00950 isoform X1 [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 7.7e-110 Identity = 203/232 (87.50%), Postives = 214/232 (92.24%), Query Frame = 0
BLAST of Cmc06g0147881 vs. NCBI nr
Match: KAE8650226.1 (hypothetical protein Csa_010309 [Cucumis sativus]) HSP 1 Score: 395.6 bits (1015), Expect = 3.0e-106 Identity = 195/215 (90.70%), Postives = 202/215 (93.95%), Query Frame = 0
BLAST of Cmc06g0147881 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 9.1e-05 Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 0
BLAST of Cmc06g0147881 vs. ExPASy TrEMBL
Match: A0A5A7U0F3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00950 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 8.9e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Cmc06g0147881 vs. ExPASy TrEMBL
Match: A0A5D3DBI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00930 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 5.7e-119 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Cmc06g0147881 vs. ExPASy TrEMBL
Match: A0A0A0L338 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119480 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110 Identity = 203/232 (87.50%), Postives = 214/232 (92.24%), Query Frame = 0
BLAST of Cmc06g0147881 vs. ExPASy TrEMBL
Match: A0A6J1ISE2 (uncharacterized protein At4g00950 OS=Cucurbita maxima OX=3661 GN=LOC111480117 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 7.3e-82 Identity = 161/220 (73.18%), Postives = 177/220 (80.45%), Query Frame = 0
BLAST of Cmc06g0147881 vs. ExPASy TrEMBL
Match: A0A6J1E9R6 (uncharacterized protein At4g00950-like OS=Cucurbita moschata OX=3662 GN=LOC111432128 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 3.1e-80 Identity = 161/220 (73.18%), Postives = 177/220 (80.45%), Query Frame = 0
BLAST of Cmc06g0147881 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0
BLAST of Cmc06g0147881 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07 Identity = 62/208 (29.81%), Postives = 86/208 (41.35%), Query Frame = 0
BLAST of Cmc06g0147881 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 2.6e-07 Identity = 59/218 (27.06%), Postives = 90/218 (41.28%), Query Frame = 0
BLAST of Cmc06g0147881 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 48.9 bits (115), Expect = 6.5e-06 Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 0
BLAST of Cmc06g0147881 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05 Identity = 25/52 (48.08%), Postives = 31/52 (59.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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