Cmc05g0143961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0143961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-type domain-containing protein
Location	CMiso1.1chr05: 27385567 .. 27389680 (-)
RNA-Seq Expression	Cmc05g0143961
Synteny	Cmc05g0143961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGAAGGAAGCTTCTTCCCTTCTTCCTCTTCATCGTTTCTCTCACTTACATTCCTTTTTTTAAGAGTGAGAAAAAGAGAGAATGATTGAGCAAATCGTCTCGTTATTGTACGTTTTGCTCTTACCACCTTCAATGCGCGAGGCCCCACTTTTGTCTGTTACCTTCTTCACTCCCCAGCTTCGTTGGCCTTCATACTTTATCCTCATTTTAATTCCTTCTTCTCACATTTCCCTATCTTCCATTCTACCTTTGTTTTCGTGTTCTTCGTTTCCTCTGCTTCTGGGTTTTTTAAATCAGCGATTTCATTTTTTTTTAGTTGTAATCCGTGATGGGTTTTGGTTAATTTTGACGAAACTGTGAAACTTGGGTTATTTTGAAATGAAATTAGTATGGATTTGAGGATTTTGGAGTTGGGTTTCTTTGTTTTCGGTGGAGTTGGTATTTTTGATTCGTTTGCTCAAACCGAGAAGCTCCATTGATTCTGAGTTGAAATCGTTTTTTTTTCTTTGTTGTTTAATGGATTTTGAGTTGAAAATATTACTTTAATCCCTTCCTCTCACATTTCTCCATCTCTCATTTTACCTCTGTTTTCAAGCTTCTTCTTCGTGTTCTTCGTTTCTCTGCTTTTGCGTGTTTTCTTTTTTCTGTTCATTCCCTGTAATTTAGGGGTTTCGTTGGCTTGATTAATTTTGACGAAATTATGAAACTGGGTTGATTTTGAGATGAAATTAGCGAGCGTGGATTTGAGAATTTGTACTTGTGTTTCTTCGTCGTGAAATGGGTATTTTGAGTTGAAATCCTCTTGGGTTTAATCCAATTAGTTTTCACCATTTCTATCTCGACTATCTCTTTCTTCTTCGTTATCCTCTCTGTTTCTCTATTCAGATTACTCTGCAGATTTTTTTTCCAAATGAGTTTCCAATAAATCTACTGATATTTCCGATTTTAATCTAACAAAAACATCGTTAATCGATGGCGGGAATGTTACCCGGAGTTGAATGTGCTAGAAGGAGGCGGTTCCACCACAGCATAAACTCATCGGACTCGCCGTCCACGGCGGCGAAATCAGGATCTACAAGAAGACCATCGTTCTGTTTGTACACAAGCAACCGTGATTTTCATCTAATTTCATCATCTTCTTCACAGGTTATTATGAATAAAAATCTAAAAAAAAATTCCTCTAGTCTTTTTTGTTTCTCGGGAAAATCTGACGAATTGTTTCTTTGGAAATTTAAAATTAAGCAACGGAGCCTGACGAATAAAGCTCATCAGAACGAGAAACTTGGTGAAATTGCAAGAGAAGCTAAGGAACGGTTAGATGAGAGGTTGAGGACTCACCGAAAACCTGAAAATTCAAGGTGATTGCTTCATGATCCACCTTATTTATGTTTGTCATTACTTTAATCTTCCTTTTCTTTTCGTTCTATTATAAATTATCCATTTGTTAATCGAAAGAACAATGACCCTTTGAGGGGGCCAGATGAAAAATGACCCAAGTTATAAAATATTCGAAAGATGGCTTTTTGTTGTTTGTGTCAGCTGTGATAGTGGTAAAGGTATCAATTTGACCTAAACACACTCTACCTCCGGTGCTCTCTCATGTATTTCCGTTCTTCCTTTCCATTTTTTCTGTGTTTTTTCTTTGCCTTCTTAGTCTGGTTTCCTCGTCTTCCTCCTCCCCTCCCCGTTTCTTTCTCATTTGTTCATGTCTTTATTTTCCCCATCTTCTTTTCACTACTTCTTCTTCTTCTTCCTAAGGGTCGAAATAAAGAGGAGACCAAGAGAGAGTGAGGCTAGAAAGTTAGAGAAAAACCTCCAGTCTAATGAAGAACAAGACTAAACGACAGTGTCAAGCCCTCGAGCACATTCTCGATACTTTCACAATTGGCTAACATACAAGAAAAACCATTTTTTTATTTTTTATTTTTTAAACTTTGGGTTATTCTTCATCTGGGCCTCGAAAAAGAGACTATCAATGAATAAAATCCCAAATTTTAGAGGGCATTTAGGAGGCTTAGTAGCTAAAGGAAATGATTCTTATGATTAGTGAATTATAGTAATAATAAATTGTGTTTATAATAGTTTGTAATTGGGGTACATACTATTTTAATTGAGTAGCAAATAATGAACATTATGACAATGAGAAAAGAGAGGACATGTAAGAAAAAAACACCTTATAAAAATAGATTTGGAAACTTTAATTGGATTCTAAGCATAAAATGAGCTCATGATCAATTTTAGTTTATATATTTTCAAATGCTAAATTTTAGTTTCTTCTTATTAATAAAAAACTTAGTCATTTAAATTTCAAAGATAATTTTATTTGAAATGAGATAAATAGTTACAATAAGAATATGTTTACCAAAATTTATAGCGAAAAATATCATTGATAATAATTCATAAATGAACTATTATTAGCGATTAAGTTTAAACTTTATTCAAAATGTAGGGTAAAATTGAACCTTTGAAAACATATAAATTAAGATCGAAAATTCGATTTTGTTAGAATTTATTTTTTATTTATTGAACATACATGTTTATAGTTAAAAAAAAAATAGAAAAGTTAGTTTAAATGATAAAACTTTTAAAAGAATATATTAAAGTATCTATAATATATAGACACGACACAAATATTAGTCTATCTACCACGATCATATTTTGATAAATTTAATAAATATTTCTCTTTATTTCTATTTTCATTTTAGTCCAAAAATTTGTAAAATTTTCATCCATATGTAATCATTGCAATTATTTCCATTAAATCGTTGACCAATTTCATTAAAAAAACTCATTGAGAAATCTAAATTTATAATGAAGCCAAAACGTTGGCCTACTAGCTACTACAATGCACACTATGACAAAATCTATATCAACCTTACGTAAATAATTAAAATTTTTTAAAAGTAAACATAAGTAGAAGTCAATCCAATATGAATATACTAGTGATCAAGAAGTCTATAATTTGTAGGAAGTTAAAAATTTTTAAGAAAAAGCATATCATTCAAACATTTTGGGGTCGTTTGGGGGAAGTGTTGGGTTATGGGGGTTAGGGTTATGATAAACCTAGGATTATAATAAGATGTGTTTGGGGGGAAGGGTTATGGAGGAAATGTTATGATAAGATGTGTTTGGTAGAAGTGTTATGAAGGAAGTGTTATGATAATGTTGTGAAGAAGGATTGAGGAAAAGTTGAAAAAGGATTAAGTAGTGTTGAAGAAGGGTTGAGGAAGGATTAAGAAGTTAAAACTAGGGTTACATAACCGGCCTTCCCCCAAACGGGGGTTGGATTACATAACCCTAACCCTCATAATCCAACCATTCCCCCAAACGCCCCCTTTATGTTTTGATAGCATGTAATTTATATTTTGTTTTCTTACTTACGGAGCAAAAAAAATAATGCCTATATGATAGAATTTTGTTGTATTTTTTGTTTTAGAAATTGTCTAAGAATTCAACATTGAACATATCAAACAAGGGTTAAATTATCGATCCAAAAAAGAAAATAATAGAAGTTGATGGTAGAACTATAAAAACAAAGTAAATCGACGTGAATAATCAAAATCTTTATGAAACTCATTTTTTTTTTTGGTACAATACAGGAGCAAGAATAGCAAGAATGAAGAAGTAAAGTCGAAGGAATCAAGAGAAAAAAATAATGGTGAGAGAAAAGAGATGAGGAGTACAAAAGGGAAAGAAGAAGAAACAAGAAAAAGGTTTAGTTGGGGCCGGAAGCTAATGAAATGGAAAGCCTCGGAGCAGGACGAGTGCAGCGTTTGTCTAGAACGGTTCAGATCTGGCGAGCCACTGCTCCATCTTCCATGTGCCCATAAGTTCCATTCCACTTGCTTGGTTCCTTGGCTCCAAGCCAATGCCCATTGTCCTTGCTGCCGCGCTTCCCTATAAGCCCTCCCTACCTAACTCTATAGAGTTTTATATTTGGTTAATCAAGGCTAAGGTAGCGCTAATGATATGTATAGATGTGTTAATGATCGAAAGGTGTGTTCAAAATTTACAAAACAATCACTACTATTAAATTATATATGATATTGAGTAATCTTGTTTTGATCGTTAATATCAATTTTTTTTGTTATATTATTAAGATTTTAGGCTGA

mRNA sequence

TCTTGAAGGAAGCTTCTTCCCTTCTTCCTCTTCATCGTTTCTCTCACTTACATTCCTTTTTTTAAGAGTGAGAAAAAGAGAGAATGATTGAGCAAATCGTCTCGTTATTGTACGTTTTGCTCTTACCACCTTCAATGCGCGAGGCCCCACTTTTGTCTGTTACCTTCTTCACTCCCCAGCTTCGTTGGCCTTCATACTTTATCCTCATTTTAATTCCTTCTTCTCACATTTCCCTATCTTCCATTCTACCTTTGTTTTCGTGTTCTTCGTTTCCTCTGCTTCTGGGTTTTTTAAATCAGCGATTTCATTTTTTTTTAGTTGTAATCCGTGATGGGTTTTGGTTAATTTTGACGAAACTGTGAAACTTGGGTTATTTTGAAATGAAATTAGTATGGATTTGAGGATTTTGGAGTTGGGTTTCTTTGTTTTCGGTGGAGTTGGTATTTTTGATTCGTTTGCTCAAACCGAGAAGCTCCATTGATTCTGAGTTGAAATCGTTTTTTTTTCTTTGTTGTTTAATGGATTTTGAGTTGAAAATATTACTTTAATCCCTTCCTCTCACATTTCTCCATCTCTCATTTTACCTCTGTTTTCAAGCTTCTTCTTCGTGTTCTTCGTTTCTCTGCTTTTGCGTGTTTTCTTTTTTCTGTTCATTCCCTGTAATTTAGGGGTTTCGTTGGCTTGATTAATTTTGACGAAATTATGAAACTGGGTTGATTTTGAGATGAAATTAGCGAGCGTGGATTTGAGAATTTGTACTTGTGTTTCTTCGTCGTGAAATGGGTATTTTGAGTTGAAATCCTCTTGGGTTTAATCCAATTAGTTTTCACCATTTCTATCTCGACTATCTCTTTCTTCTTCGTTATCCTCTCTGTTTCTCTATTCAGATTACTCTGCAGATTTTTTTTCCAAATGAGTTTCCAATAAATCTACTGATATTTCCGATTTTAATCTAACAAAAACATCGTTAATCGATGGCGGGAATGTTACCCGGAGTTGAATGTGCTAGAAGGAGGCGGTTCCACCACAGCATAAACTCATCGGACTCGCCGTCCACGGCGGCGAAATCAGGATCTACAAGAAGACCATCGTTCTGTTTGTACACAAGCAACCGTGATTTTCATCTAATTTCATCATCTTCTTCACAGCAACGGAGCCTGACGAATAAAGCTCATCAGAACGAGAAACTTGGTGAAATTGCAAGAGAAGCTAAGGAACGGTTAGATGAGAGGTTGAGGACTCACCGAAAACCTGAAAATTCAAGGAGCAAGAATAGCAAGAATGAAGAAGTAAAGTCGAAGGAATCAAGAGAAAAAAATAATGGTGAGAGAAAAGAGATGAGGAGTACAAAAGGGAAAGAAGAAGAAACAAGAAAAAGGTTTAGTTGGGGCCGGAAGCTAATGAAATGGAAAGCCTCGGAGCAGGACGAGTGCAGCGTTTGTCTAGAACGGTTCAGATCTGGCGAGCCACTGCTCCATCTTCCATGTGCCCATAAGTTCCATTCCACTTGCTTGGTTCCTTGGCTCCAAGCCAATGCCCATTGTCCTTGCTGCCGCGCTTCCCTATAAGCCCTCCCTACCTAACTCTATAGAGTTTTATATTTGGTTAATCAAGGCTAAGGTAGCGCTAATGATATGTATAGATGTGTTAATGATCGAAAGGTGTGTTCAAAATTTACAAAACAATCACTACTATTAAATTATATATGATATTGAGTAATCTTGTTTTGATCGTTAATATCAATTTTTTTTGTTATATTATTAAGATTTTAGGCTGA

Coding sequence (CDS)

ATGGCGGGAATGTTACCCGGAGTTGAATGTGCTAGAAGGAGGCGGTTCCACCACAGCATAAACTCATCGGACTCGCCGTCCACGGCGGCGAAATCAGGATCTACAAGAAGACCATCGTTCTGTTTGTACACAAGCAACCGTGATTTTCATCTAATTTCATCATCTTCTTCACAGCAACGGAGCCTGACGAATAAAGCTCATCAGAACGAGAAACTTGGTGAAATTGCAAGAGAAGCTAAGGAACGGTTAGATGAGAGGTTGAGGACTCACCGAAAACCTGAAAATTCAAGGAGCAAGAATAGCAAGAATGAAGAAGTAAAGTCGAAGGAATCAAGAGAAAAAAATAATGGTGAGAGAAAAGAGATGAGGAGTACAAAAGGGAAAGAAGAAGAAACAAGAAAAAGGTTTAGTTGGGGCCGGAAGCTAATGAAATGGAAAGCCTCGGAGCAGGACGAGTGCAGCGTTTGTCTAGAACGGTTCAGATCTGGCGAGCCACTGCTCCATCTTCCATGTGCCCATAAGTTCCATTCCACTTGCTTGGTTCCTTGGCTCCAAGCCAATGCCCATTGTCCTTGCTGCCGCGCTTCCCTATAA

Protein sequence

MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQRSLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERKEMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL

Homology

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BLAST of Cmc05g0143961 vs. NCBI nr
Match: XP_008456709.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo])

HSP 1 Score: 380.9 bits (977), Expect = 6.4e-102
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
           SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVK KESREKNNGERK
Sbjct: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKWKESREKNNGERK 120

Query: 121 EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL 180
           EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL
Sbjct: 121 EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL 180

Query: 181 VPWLQANAHCPCCRASL 198
           VPWLQANAHCPCCRASL
Sbjct: 181 VPWLQANAHCPCCRASL 197

[Close]

BLAST of Cmc05g0143961 vs. NCBI nr
Match: XP_004139268.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN60748.1 hypothetical protein Csa_019469 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 177/194 (91.24%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SINSSDSP TA KSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSINSSDSPFTAGKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
           SLTN+A+QN+KLGEIAREAKERLDERLRTHRKPENSR KN+ NEEVK KESREKNNGE+K
Sbjct: 61  SLTNQAYQNDKLGEIAREAKERLDERLRTHRKPENSRKKNN-NEEVKGKESREKNNGEKK 120

Query: 121 EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL 180
           EM++TKGKEEET+KRFSWGRKLMKWKASEQ+ECSVCLERFR  EPLLHLPCAHKFHSTCL
Sbjct: 121 EMKNTKGKEEETKKRFSWGRKLMKWKASEQEECSVCLERFRLSEPLLHLPCAHKFHSTCL 180

Query: 181 VPWLQANAHCPCCR 195
           VPWLQANAHCPCCR
Sbjct: 181 VPWLQANAHCPCCR 193

[Close]

BLAST of Cmc05g0143961 vs. NCBI nr
Match: XP_038891102.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-75
Identity = 162/197 (82.23%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SI SSDSPSTAAKSGSTRRPSFCLYTSNRDFH  SSSSSQ R
Sbjct: 1   MAGMLPGVECARRRRFHQSIASSDSPSTAAKSGSTRRPSFCLYTSNRDFHSTSSSSSQHR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
           S +N+A+QNEKLGEIAREAKERLDERLRTHRKPENSR K S+NE+V  K S EK NGE K
Sbjct: 61  SSSNQAYQNEKLGEIAREAKERLDERLRTHRKPENSRRK-SENEKVGWKGSSEK-NGEEK 120

Query: 121 EMRSTKGKEEE---TRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHS 180
           E   TKGKEE    T+KRF+WG KLMKW+ASEQ+EC+VCLERFR GEPL+HLPCAHKFHS
Sbjct: 121 E--RTKGKEESIIITKKRFNWG-KLMKWRASEQEECTVCLERFRVGEPLVHLPCAHKFHS 180

Query: 181 TCLVPWLQANAHCPCCR 195
           TCLVPWLQAN+HCPCCR
Sbjct: 181 TCLVPWLQANSHCPCCR 192

[Close]

BLAST of Cmc05g0143961 vs. NCBI nr
Match: XP_023538036.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 5.5e-69
Identity = 152/195 (77.95%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SI SSDS STAAK GSTRR SFCLYTSNRDFHL +SSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYTSNRDFHL-TSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
             +N A+QNEKLG+ AREAKERLDERLRTHRKPENSR K+S +EEV          G +K
Sbjct: 61  CSSNHAYQNEKLGQAAREAKERLDERLRTHRKPENSRKKSS-SEEV----------GLKK 120

Query: 121 EMRSTKGKEE-ETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTC 180
           E    KGKEE  T+KRFSWG KLMKWKASEQ+EC+VCLERFR+ EPL+HLPCAHKFHSTC
Sbjct: 121 E--KAKGKEETTTKKRFSWG-KLMKWKASEQEECTVCLERFRAVEPLVHLPCAHKFHSTC 180

Query: 181 LVPWLQANAHCPCCR 195
           LVPWLQANAHCPCCR
Sbjct: 181 LVPWLQANAHCPCCR 180

[Close]

BLAST of Cmc05g0143961 vs. NCBI nr
Match: KAG7030344.1 (putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.6 bits (693), Expect = 5.5e-69
Identity = 148/196 (75.51%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSS-SQQ 60
           MAGMLPGVECARRRRFH SI  SD+PSTAAK GSTRRPSFCLYTSNRDFH+ SSSS SQQ
Sbjct: 1   MAGMLPGVECARRRRFHQSITLSDTPSTAAKLGSTRRPSFCLYTSNRDFHITSSSSCSQQ 60

Query: 61  RSLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGER 120
           RS +++A+QNEKLGEIAREAKERLDERLRTHRKPEN R K+ +           KN+ E+
Sbjct: 61  RSSSHQAYQNEKLGEIAREAKERLDERLRTHRKPENPRKKSGEG---------LKNSLEK 120

Query: 121 KEMRSTKGKEEE-TRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHST 180
           KE    KGKEE  T+KRF+WG KLMKWKASEQ+EC+VCLE FR+GEPL+HLPCAHKFHS 
Sbjct: 121 KE--KAKGKEESITKKRFTWG-KLMKWKASEQEECAVCLEGFRAGEPLVHLPCAHKFHSA 180

Query: 181 CLVPWLQANAHCPCCR 195
           CLVPWLQ NAHCPCCR
Sbjct: 181 CLVPWLQTNAHCPCCR 184

[Close]

BLAST of Cmc05g0143961 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.1e-09
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 148 SEQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           SE ++C+VC++ F  G  +  +PC H FH  CL+PWL+ +  CP CR  L
Sbjct: 211 SEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of Cmc05g0143961 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-09
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 146 KASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           K  E   CSVCL+    G     +PC HKFHS+C++PWL+ ++ CP CR  L
Sbjct: 192 KIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFEL 243

[Close]

BLAST of Cmc05g0143961 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.7e-09
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0


Query: 149 EQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRA 196
           E+ EC++C+E F+  + ++ LPC H FH  C+ PWL+ N  C  CRA
Sbjct: 392 EEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRA 438

[Close]

BLAST of Cmc05g0143961 vs. ExPASy Swiss-Prot
Match: Q91YL2 (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 152 ECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           EC VC E +  GE +  LPC H FH +C+VPWL+ +  CP CR SL
Sbjct: 230 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275

[Close]

BLAST of Cmc05g0143961 vs. ExPASy Swiss-Prot
Match: Q6IRP0 (E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-08
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 152 ECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           EC VC E +  GE +  LPC H FH+ C++PWL+ +  CP CR SL
Sbjct: 227 ECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272

[Close]

BLAST of Cmc05g0143961 vs. ExPASy TrEMBL
Match: A0A1S3C563 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103496570 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
           SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVK KESREKNNGERK
Sbjct: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKWKESREKNNGERK 120

Query: 121 EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL 180
           EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL
Sbjct: 121 EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL 180

Query: 181 VPWLQANAHCPCCRASL 198
           VPWLQANAHCPCCRASL
Sbjct: 181 VPWLQANAHCPCCRASL 197

[Close]

BLAST of Cmc05g0143961 vs. ExPASy TrEMBL
Match: A0A0A0LG47 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009360 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 177/194 (91.24%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SINSSDSP TA KSGSTRRPSFCLYTSNRDFHLISSSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSINSSDSPFTAGKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
           SLTN+A+QN+KLGEIAREAKERLDERLRTHRKPENSR KN+ NEEVK KESREKNNGE+K
Sbjct: 61  SLTNQAYQNDKLGEIAREAKERLDERLRTHRKPENSRKKNN-NEEVKGKESREKNNGEKK 120

Query: 121 EMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCL 180
           EM++TKGKEEET+KRFSWGRKLMKWKASEQ+ECSVCLERFR  EPLLHLPCAHKFHSTCL
Sbjct: 121 EMKNTKGKEEETKKRFSWGRKLMKWKASEQEECSVCLERFRLSEPLLHLPCAHKFHSTCL 180

Query: 181 VPWLQANAHCPCCR 195
           VPWLQANAHCPCCR
Sbjct: 181 VPWLQANAHCPCCR 193

[Close]

BLAST of Cmc05g0143961 vs. ExPASy TrEMBL
Match: A0A6J1HQI5 (probable E3 ubiquitin-protein ligase RHY1A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465688 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.8e-69
Identity = 148/195 (75.90%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SI SS+S STAAK GSTRR SFCLYTSNRDFHL +SSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSESASTAAKLGSTRRSSFCLYTSNRDFHL-TSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
             +N A+QNEKLG+ AREAKERLDERLRTHRKPENSR+K+S +EEV+ K+          
Sbjct: 61  CSSNHAYQNEKLGQAAREAKERLDERLRTHRKPENSRTKSS-SEEVRLKK---------- 120

Query: 121 EMRSTKGKEE-ETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTC 180
              + KGKEE  T+KRFSWG KLMKWKASEQ+EC+VCLERFR+ EPL+HLPCAHKFHS C
Sbjct: 121 --ENVKGKEETTTKKRFSWG-KLMKWKASEQEECTVCLERFRAAEPLVHLPCAHKFHSMC 180

Query: 181 LVPWLQANAHCPCCR 195
           LVPWLQANAHCPCCR
Sbjct: 181 LVPWLQANAHCPCCR 180

[Close]

BLAST of Cmc05g0143961 vs. ExPASy TrEMBL
Match: A0A6J1G4D6 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC111450678 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.3e-67
Identity = 140/195 (71.79%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSS-SQQ 60
           MAGMLPGVECARRRRFH SI SSD+PSTAAK GSTRRPSFCLYTSNRDFH+ SSSS SQQ
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSDTPSTAAKLGSTRRPSFCLYTSNRDFHITSSSSCSQQ 60

Query: 61  RSLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGER 120
           RS +++A+QNEKLGEIAREAKERLDERLRTHRKPEN R K+ +  +              
Sbjct: 61  RSSSHQAYQNEKLGEIAREAKERLDERLRTHRKPENPRKKSGEGWK-------------- 120

Query: 121 KEMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTC 180
                   +E  T+KRF+WG KLMKWKASEQ+EC+VCLE FR+GEPL+HLPCAHKFHS C
Sbjct: 121 --------EESITKKRFTWG-KLMKWKASEQEECAVCLEGFRAGEPLVHLPCAHKFHSAC 172

Query: 181 LVPWLQANAHCPCCR 195
           LVPWLQ NAHCPCCR
Sbjct: 181 LVPWLQTNAHCPCCR 172

[Close]

BLAST of Cmc05g0143961 vs. ExPASy TrEMBL
Match: A0A6J1FHS8 (E3 ubiquitin-protein ligase ZNRF3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444265 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.6e-66
Identity = 146/195 (74.87%), Postives = 161/195 (82.56%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHSINSSDSPSTAAKSGSTRRPSFCLYTSNRDFHLISSSSSQQR 60
           MAGMLPGVECARRRRFH SI SSDS STAAK GSTRR SFCLY SNRDFHL +SSSSQQR
Sbjct: 1   MAGMLPGVECARRRRFHQSITSSDSASTAAKLGSTRRSSFCLYASNRDFHL-TSSSSQQR 60

Query: 61  SLTNKAHQNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESREKNNGERK 120
             +N A+Q+EKLG+ AREAKERLDERLRTHRKPENSR K+S +EEV          G +K
Sbjct: 61  CSSNHAYQDEKLGQAAREAKERLDERLRTHRKPENSRKKSS-SEEV----------GLKK 120

Query: 121 EMRSTKGKEE-ETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPCAHKFHSTC 180
           E    KGKEE  T+KRF WG KLMKWKASEQ+EC+VCLE+FR+ EPL+HLPCAHKFHS C
Sbjct: 121 E--KAKGKEETTTKKRFGWG-KLMKWKASEQEECTVCLEKFRATEPLVHLPCAHKFHSAC 180

Query: 181 LVPWLQANAHCPCCR 195
           LVPWLQANA+CPCCR
Sbjct: 181 LVPWLQANAYCPCCR 180

[Close]

BLAST of Cmc05g0143961 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-33
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHS---INSSDSPSTAAKSGS--TRRPSFCLYTSNRDFHLISSS 60
           MAGMLPGVECARRRRFH     I SS++ S AA +G   TRRPSF LYT+N + H    S
Sbjct: 1   MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60

Query: 61  SSQQRSLTNKAH---QNEKLGEIAREAKERLDERLR-THRKPENSRSKNSKNEEVKSKES 120
            S +RS+ NK++    +EKL   A+EAK+RL++RLR   R  +N + K +K E+ K K  
Sbjct: 61  FS-ERSVRNKSYGEDNDEKLDGAAKEAKQRLNKRLRIPPRTRQNGKDKGNKLEQGKGKPL 120

Query: 121 REKNNGERKEMRSTKGKEEETRKRFSWGRKLMKWKASEQDECSVCLERFRSGEPLLHLPC 180
            +    E   ++ ++G+  E  KR          +  EQ +C++CL+RF+ GE L+HLPC
Sbjct: 121 GDLPT-EVVGLKKSRGRLMEWFKR----------RVREQQDCAICLDRFKKGETLVHLPC 180

Query: 181 AHKFHSTCLVPWLQANAHCPCCRASL 198
           AHKFHS CL+PWL  N +CP CR  +
Sbjct: 181 AHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of Cmc05g0143961 vs. TAIR 10
Match: AT2G15580.2 (RING/U-box superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12
Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 1   MAGMLPGVECARRRRFHHS---INSSDSPSTAAKSGS--TRRPSFCLYTSNRDFHLISSS 60
           MAGMLPGVECARRRRFH     I SS++ S AA +G   TRRPSF LYT+N + H    S
Sbjct: 1   MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60

Query: 61  SSQQRSLTNKAH---QNEKLGEIAREAKERLDERLRTHRKPENSRSKNSKNEEVKSKESR 118
            S +RS+ NK++    +EKL   A+EAK+RL++RLR    P  S  K  K + +   + R
Sbjct: 61  FS-ERSVRNKSYGEDNDEKLDGAAKEAKQRLNKRLRI--PPRTSSGKMVKTKGINWSKER 120

[Close]

BLAST of Cmc05g0143961 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.3e-11
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 146 KASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           K SE  +CS+CL+ F  G     +PC HKFH  C+VPWL+ ++ CP CR  L
Sbjct: 234 KISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285

[Close]

BLAST of Cmc05g0143961 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.3e-11
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 146 KASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           K SE  +CS+CL+ F  G     +PC HKFH  C+VPWL+ ++ CP CR  L
Sbjct: 234 KISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285

[Close]

BLAST of Cmc05g0143961 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 146 KASEQDECSVCLERFRSGEPLLHLPCAHKFHSTCLVPWLQANAHCPCCRASL 198
           K  E  +CSVCL+ F  G     +PC HKFHS CL+PWL+ ++ CP CR  L
Sbjct: 216 KIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQL 267

The following BLAST results are available for this feature:

BLAST of Cmc05g0143961 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456709.1	6.4e-102	99.49	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo]	[more]
XP_004139268.1	2.3e-91	91.24	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN60748.1 hypothe...	[more]
XP_038891102.1	1.0e-75	82.23	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_023538036.1	5.5e-69	77.95	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]
KAG7030344.1	5.5e-69	75.51	putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cmc05g0143961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	5.1e-09	44.00	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q6AVN2	6.7e-09	46.15	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q9C1X4	8.7e-09	44.68	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
Q91YL2	1.5e-08	52.17	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]
Q6IRP0	3.3e-08	50.00	E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 ...	[more]

BLAST of Cmc05g0143961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C563	3.1e-102	99.49	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103496570 PE=4 SV=1	[more]
A0A0A0LG47	1.1e-91	91.24	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009360 P...	[more]
A0A6J1HQI5	7.8e-69	75.90	probable E3 ubiquitin-protein ligase RHY1A isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1G4D6	3.3e-67	71.79	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FHS8	3.6e-66	74.87	E3 ubiquitin-protein ligase ZNRF3-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Cmc05g0143961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15580.1	4.0e-33	46.12	RING/U-box superfamily protein	[more]
AT2G15580.2	1.0e-12	47.20	RING/U-box superfamily protein	[more]
AT4G26400.2	7.3e-11	48.08	RING/U-box superfamily protein	[more]
AT4G26400.1	7.3e-11	48.08	RING/U-box superfamily protein	[more]
AT1G55530.1	1.2e-10	50.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 153..193 e-value: 1.9E-4 score: 30.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 151..194 e-value: 1.9E-11 score: 44.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 153..194 score: 12.445019
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 126..197 e-value: 7.1E-18 score: 65.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 1..196
None	No IPR available	PANTHER	PTHR22765:SF204	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..196
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 152..194 e-value: 1.7872E-17 score: 70.4085
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 141..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0143961.1	Cmc05g0143961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity