Cmc05g0141481 (gene) Melon (Charmono) v1.1

Overview
NameCmc05g0141481
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr05: 25590806 .. 25594845 (+)
RNA-Seq ExpressionCmc05g0141481
SyntenyCmc05g0141481
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCGACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTCGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTGGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAATTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTTGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTGTGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACCAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCTCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAAATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACATTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACGACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAGTTTCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGAGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGGTAGCCAAGGGCTACACTACACTCAGAAGGAGGGAGTTGATTTTCATGAGATTTTCTCTTCGGTGGTGAGGCATTCGTCTATCAGATTAATTTTATCTATTGCTGTTCACTTTGACATGTTTATTGAACAGATGGACGTCACCACAACATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAAGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGACTAAAACAATCTCCAAGACAGTGGTACATCAGTTTTGACACTTTCATTCTAAAGCAGGGATTCCATAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGGAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGGATCTTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTAGTAGCAAGGCAGTTTCAACACCTTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCCGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

mRNA sequence

ATGGCTTCGACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTCGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTGGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAATTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTTGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTGTGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACCAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCTCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAAATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACATTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACGACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAGTTTCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGAGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGATGGACGTCACCACAACATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAAGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGACTAAAACAATCTCCAAGACAGTGGTACATCAGTTTTGACACTTTCATTCTAAAGCAGGGATTCCATAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGGAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGGATCTTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTAGTAGCAAGGCAGTTTCAACACCTTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCCGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Coding sequence (CDS)

ATGGCTTCGACACGATTTGAAGTGTCTAAGTTTAATGGACATGGAGATTTCGCTCTTTGGAGAAAAAAGATTAGAGCTATTTTGGTTCAACATAAAGTAGCAAAGATCTTAGATGAAGAGAGACTTCCAGATAATATTACAGAAAGTGAAAAAAGAGATATGGATGAAATGGCCTATTGGACTATTCTTCTGTATCTGTCAGATGAAGTTCTTAGGCTAGTGGATGAGGCTACTACTACAGGGGAGTTGTGGAAAAAGCTAGAGAGCCTTTATTTGACAAAGTCATTGCCAAATAAAATATATATAAAGGAGAAGTTCTTTGGATATAAAATGGACCAAAGTAAAATTTTAGAAGAGAATCTGGATGAATTTCAGAAGATTGTAGTTGATCTCAATAACATTGGTGAAAAGATGTCGGATGAGAATCAAGCAGTGATTCTTTTAAATTCACTACCAGAAACATATCGAGAGGTTAAGGCTGCTATTAAATATGGTTGGGATTCATTGACCATGAGTATAGTGTTGGATGCCTTGAAAACTAGAAATCTCGAGATCAAGAAAGAACGCAAAGATGGCGAGTTACTAATGGCCAGAGGGAGGAGTGAGAAAAAGAGCTGGAAAGGTAAAGAGAGGAGTTTCAGGTCAAAATCCAAGGGAAAATCTAGAAAGTGTTTCCTTTGTCATAAAGAAGGACACTTTAAGAAAAATTGCCCTTTGAATAAGAGCAGAGAAGCATCAACCAGTGAAGCGAATGTTACTGATGGGTATAATTCAGCAGAGATCACTGATGGGTGTGATTCAGCAGAGACTGGGTATGAGTCTGCAGAGGTCTTGATGGTGTCTCACAGAGATATACAGGATGCTTGGATCATGGATTCAGGGTGTACTTTTCATATGACCCCTCATCGGGATTTTCTGACAAACTTTCAGAAAGTTGATGGGGGAAAGGTCTTATTGGGTGACAATGGTACATGCGATGTAAAAGGAACTGGTTCAGTGCAAATTGCAACACATGATGGGATGGTAAGAATACTTACCAATGTGCGGTATGTTCCAAAACTTAAACGTAATCTAATATCTCTTGGGGAATTAGATAGATCAGGTTGTACCATAAAATCTGAAAATGGAGTTATGAAAGTTACCAAAGGTTCTCTAGTTAAACTGAGGGGAACTTTAAGACATGGTCTATATGTGTTGGAAGGTACTACAGTTTCAGGCAGTGCTGCTATTGCGTCTGGTAAAGTTACAAATATGTCTATGTTATGGCATAAAAGGCTAGCTCATGTGAGTGAAAGAGGCTTACAAGCTCTATCCCAACAAGGTTTGCTAGGAGGAGTTAAGAATGTTGAACTCCCATTTTGTGAACATTGTATAATGGGAAAGTCTACCAGAGTAAAGTTTGGGAAAGGGAAGCACACGACCAAAGGTATTTTGGATTATATTCACTCAGATTTGTGGGGTCCTACGAAAGAGGTCTCTATGGGAGGTTCGAGATACTTTATCTCTATCATTGATGATTTCTCAAGAAAAGTATGGATTTATCCATTGAAACAAAAGGATGAAGCTTTTGGAAAGTTTCTTGAATGGAAGAAGCAGGTTGAGAACCAAACAGGTAGGAAGGTTAAGTATCTGAGGACAGATAATGGCTTAGAGTTTGTAAATAACAAATTCAACCAGTTTTGCAAATCTGAGGGAATCACGAGGCACTTTACTGTTACATACACTCCACAACAAAATGGTTTGGCTGAAAGGTTTAACAGAACTATCATGGAACGTACAAGGTGTCTCTTGACTAATGCTTCTTTACCATTGAAATTTTGGGGAGAAGCTGCCCAAACAGCGTGTTATCTCATTAATAGGAGTCCTTCTACCGCTTTAAACTTAAAGACTCCTCAGGAGGTCTGGACAGGTAAGGCTCCAAGTTTAGAACATCTTAGAGTGTTTGGATGCACAGCTTATGCTCATGTTAAAGATGGAAAATTGAACAAGAGGGCACTGAAATGCATGTTTATTGGGTATCCTCAGGGTGTCAAAGGTTATAAACTTTGGTGCATTGAAAAAGGGATGAATAAATGCATTATCAGTAGAGATGTAACTTTTAATGAGACTGAAATGCCTTACTGTGTTAAAGAGCAGCAGAAACAACAGACGGGTGATCATGTTGTGACAGAAGTTAGAATTGCTTCAGAAGTACGACCATCAATTGACTTAGATAATCAGCCGCCACTGGTTTCAGAAATAGAGGATACACAACAGTCTGAATTTGATGGTATCCAATCTCAACAGGAGAGGATTTTGATTGATGAGAGAGCTTTTATTGAAGAAAGCTCAAGTAACAATGACCTACAGAATTATCAGCTTACCCGTGACAGAGTTCAGAGGGAAAGACATGCACCTATAAGGTATGGTTATGCTGACTTAGTTGCTTATGCTCTCACTTGTGCAGCTGACAGTATTGAAGCAGAGCCTCTTACCTTTGAAGAGGCAATTGTATCTGATTCAAAGAAACAATGGAAGGATGCCATGGAAGAAGAATTGTTCTCTTTGCATAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTTATTCAATCAAAATGGATTTACAAAATTAAGCCAGGTACAGGAGGTAACAGTAAGCCTAGATATAAGGCTAGGTTGATGGACGTCACCACAACATTTCTTCATGGAGAATTGGAGGAAGTGATCTACATGGCTCAACCTAAGGGCTATGAAGTGAAGGGTAAGGAAGACATGGTTTGTCGACTTCACAAGTCCCTCTATGGACTAAAACAATCTCCAAGACAGTGGTACATCAGTTTTGACACTTTCATTCTAAAGCAGGGATTCCATAGAAACTCATATGATGCTTGTGTTTACTGGAAACAATCTCAAAAAGGTACGTACATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGGAATATGTGAACTCAAGAAACAGTTGAGTAATGAGTTTGAAATGAAAGATTTAGGTGAACTAAAGAGGATCTTAGGCATGGATGTAAAGAGAGATAGAGAGAAAGGTTTGTTAACCATCTCGCAGGAGAGTTATGTGATCAAACTGCTTGAAAAGTATAATATGTCTAGTAGCAAGGCAGTTTCAACACCTTTAGCATCTCACTTTAGACTTTCTTCGTCACAATGTCCTGTTACTAAACAAGAAAGGATAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGGAGTATTATGTATCTGATGATTTGTACTAGACCTGACTTGGGTTATGCTATGAGTATGATCAGTAGATTTATGTCAAATCCTGGGAAGGAACATTGGAAAGCCGTTAAATGGGTATTACGATATTTGAAAGGTAGTGCCAGTGTATCATTGTGTTATAGCAGGGATTGTGATAAATCAACACTGTTAGAAGGTTTCACAGATGCTGACTATGCTGCAGACCTTGATAAAAGAAGGTCCTTATCAGGTCACATTTTTCGTTTATATGGTAATGTTGTCAGTTGGAAAGTTAACCTACAGCCAGTTGTTGCTTTGTCGACTACGGAGTCAGAATATATTTCTCTTGGTGAAGCAGTTAAGGAAGCAGTATGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAGGAGTTTATTCCTATCATTCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCTTCTCATCATGAACGATCTAAGCATATCGATGTCAAATTTCATTACATAAGAAACGTCATTGCTCAGAAAGACGTGGAACTGGTCAAAGTTCATACAGTTGAGAATTTGTCAGACATGCTAACTAAAGCTCTTTCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATCTGGATGA

Protein sequence

MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYWTILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHRFKYLLDELNVKSG
Homology
[Close]
BLAST of Cmc05g0141481 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 2578.5 bits (6682), Expect = 0.0e+00
Identity = 1289/1303 (98.93%), Postives = 1289/1303 (98.93%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL--------- 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL         
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLILSIAVHFD 900

Query: 901  -----MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFD 960
                 MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFD
Sbjct: 901  MFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFD 960

Query: 961  TFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEM 1020
            TFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEM
Sbjct: 961  TFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEM 1020

Query: 1021 KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQ 1080
            KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQ
Sbjct: 1021 KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQ 1080

Query: 1081 CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVL 1140
            CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVL
Sbjct: 1081 CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVL 1140

Query: 1141 RYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQ 1200
            RYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQ
Sbjct: 1141 RYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQ 1200

Query: 1201 PVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHER 1260
            PVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHER
Sbjct: 1201 PVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHER 1260

Query: 1261 SKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1290
            SKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1261 SKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1303

[Close]
BLAST of Cmc05g0141481 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2556.2 bits (6624), Expect = 0.0e+00
Identity = 1288/1344 (95.83%), Postives = 1292/1344 (96.13%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL--------- 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL         
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  ---------------------------------MDVTTTFLHGELEEVIYMAQPKGYEVK 960
                                             MDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

[Close]
BLAST of Cmc05g0141481 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2390.9 bits (6195), Expect = 0.0e+00
Identity = 1221/1331 (91.74%), Postives = 1225/1331 (92.04%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL--------- 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL         
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  ---------------------------------MDVTTTFLHGELEEVIYMAQPKGYEVK 960
                                             MDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1290
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

[Close]
BLAST of Cmc05g0141481 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2241.5 bits (5807), Expect = 0.0e+00
Identity = 1123/1174 (95.66%), Postives = 1126/1174 (95.91%), Query Frame = 0 

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVT+MSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDER 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE 
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  L------------------------------------------MDVTTTFLHGELEEVIY 950
            L                                          MDVTT FLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1070
            QKGTYIYLLLYVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1303
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

[Close]
BLAST of Cmc05g0141481 vs. NCBI nr
Match: KAA0043826.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 2007.6 bits (5200), Expect = 0.0e+00
Identity = 1044/1193 (87.51%), Postives = 1061/1193 (88.94%), Query Frame = 0 

Query: 111  MDQSKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLT 170
            MDQSK LEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEIT+G DSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVT+MSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDER 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE 
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA- 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP    +S     + 
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSI 780

Query: 891  --------RLMDVTTTFLHGELEEVIYMAQPKGYEVKGKE-----DMVCRLHKSLYGLKQ 950
                      MDVTTTFLHGELEEVIYMAQPKGYEVKGKE     DMVCRLHKSLYGLKQ
Sbjct: 781  AVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQ 840

Query: 951  SPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICEL 1010
            SPRQWYI FDTFILKQG                  T  +++L           + G   L
Sbjct: 841  SPRQWYIRFDTFILKQG-----------------STETHMMLV----------FTG-NNL 900

Query: 1011 KKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPL 1070
            KK  ++ +      ELKRILGMDVKRD+EKGLLTISQESYVIKLLEKYNMS SKAVSTPL
Sbjct: 901  KKVRTSIY----CCELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPL 960

Query: 1071 ASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGK 1130
            ASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS           
Sbjct: 961  ASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS----------- 1020

Query: 1131 EHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYG 1190
                           SASVSLCYSRDCDKSTLLEGFTDADYAADLDKR  L         
Sbjct: 1021 ---------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL--------- 1080

Query: 1191 NVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIH 1250
                          L    +EYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIH
Sbjct: 1081 -------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIH 1113

Query: 1251 LAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1290
            LAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1141 LAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]
BLAST of Cmc05g0141481 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 944.5 bits (2440), Expect = 1.3e-273
Identity = 532/1345 (39.55%), Postives = 786/1345 (58.44%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILD-EERLPDNITESEKRDMDEMAY 60
            M+  ++EV+KFNG   F+ W++++R +L+Q  + K+LD + + PD +   +  D+DE A 
Sbjct: 1    MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 61   WTILLYLSDEVL-RLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILE 120
              I L+LSD+V+  ++DE T  G +W +LESLY++K+L NK+Y+K++ +   M +     
Sbjct: 61   SAIRLHLSDDVVNNIIDEDTARG-IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFL 120

Query: 121  ENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDAL 180
             +L+ F  ++  L N+G K+ +E++A++LLNSLP +Y  +   I +G  ++ +  V  AL
Sbjct: 121  SHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 180

Query: 181  KTRNLEIKKERKDGELLM--ARGRSEKKSWKGKERS-----FRSKSKGKSRKCFLCHKEG 240
                   KK    G+ L+   RGRS ++S     RS      +++SK + R C+ C++ G
Sbjct: 181  LLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPG 240

Query: 241  HFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIM 300
            HFK++CP  +  +  TS     D  N+A +    D+        E  M      +  W++
Sbjct: 241  HFKRDCPNPRKGKGETSGQKNDD--NTAAMVQNNDNVVLFINEEEECM-HLSGPESEWVV 300

Query: 301  DSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYV 360
            D+  + H TP RD    +   D G V +G+     + G G + I T+ G   +L +VR+V
Sbjct: 301  DTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHV 360

Query: 361  PKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIA 420
            P L+ NLIS   LDR G      N   ++TKGSLV  +G  R  LY        G    A
Sbjct: 361  PDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAA 420

Query: 421  SGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGK 480
              +++    LWHKR+ H+SE+GLQ L+++ L+   K   +  C++C+ GK  RV F    
Sbjct: 421  QDEIS--VDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSS 480

Query: 481  HTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKK 540
                 ILD ++SD+ GP +  SMGG++YF++ IDD SRK+W+Y LK KD+ F  F ++  
Sbjct: 481  ERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHA 540

Query: 541  QVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIME 600
             VE +TGRK+K LR+DNG E+ + +F ++C S GI    TV  TPQ NG+AER NRTI+E
Sbjct: 541  LVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVE 600

Query: 601  RTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCT 660
            + R +L  A LP  FWGEA QTACYLINRSPS  L  + P+ VWT K  S  HL+VFGC 
Sbjct: 601  KVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCR 660

Query: 661  AYAHV---KDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYC 720
            A+AHV   +  KL+ +++ C+FIGY     GY+LW  +    K I SRDV F E+E+   
Sbjct: 661  AFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLW--DPVKKKVIRSRDVVFRESEVRTA 720

Query: 721  VKEQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILID 780
                +K + G  +   V I S        ++    VSE     Q E  G   +Q   L D
Sbjct: 721  ADMSEKVKNG-IIPNFVTIPSTSNNPTSAESTTDEVSE-----QGEQPGEVIEQGEQL-D 780

Query: 781  ERAFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEE 840
            E     E  +  + Q+  L R   +R R    RY   + V         S + EP + +E
Sbjct: 781  EGVEEVEHPTQGEEQHQPLRRS--ERPRVESRRYPSTEYVLI-------SDDREPESLKE 840

Query: 841  AIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYK 900
             +    K Q   AM+EE+ SL KN T+ LV  P  ++ ++ KW++K+K   G     RYK
Sbjct: 841  VLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKK-DGDCKLVRYK 900

Query: 901  ARL------------------------------------------MDVTTTFLHGELEEV 960
            ARL                                          +DV T FLHG+LEE 
Sbjct: 901  ARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEE 960

Query: 961  IYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWK 1020
            IYM QP+G+EV GK+ MVC+L+KSLYGLKQ+PRQWY+ FD+F+  Q + +   D CVY+K
Sbjct: 961  IYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFK 1020

Query: 1021 QSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREK 1080
            +  +  +I LLLYVDDM++V KD   I +LK  LS  F+MKDLG  ++ILGM + R+R  
Sbjct: 1021 RFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTS 1080

Query: 1081 GLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAV 1140
              L +SQE Y+ ++LE++NM ++K VSTPLA H +LS   CP T +E+  M+ +PY +AV
Sbjct: 1081 RKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAV 1140

Query: 1141 GSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKS 1200
            GS+MY M+CTRPD+ +A+ ++SRF+ NPGKEHW+AVKW+LRYL+G+    LC+       
Sbjct: 1141 GSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG---GSD 1200

Query: 1201 TLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVK 1260
             +L+G+TDAD A D+D R+S +G++F   G  +SW+  LQ  VALSTTE+EYI+  E  K
Sbjct: 1201 PILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGK 1260

Query: 1261 EAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDV 1292
            E +WLKR + EL   +   +++CDSQSAI L+KN  +H R+KHIDV++H+IR ++  + +
Sbjct: 1261 EMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESL 1317

[Close]
BLAST of Cmc05g0141481 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 576.6 bits (1485), Expect = 6.9e-163
Identity = 425/1453 (29.25%), Postives = 712/1453 (49.00%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            M   +  +  F+G   +A+W+ +IRA+L +  V K++D   +P+ + +S K+  +  A  
Sbjct: 1    MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVD-GLMPNEVDDSWKK-AERCAKS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TI+ YLSD  L       T  ++ + L+++Y  KSL +++ ++++    K+     L  +
Sbjct: 61   TIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSH 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIK-YGWDSLTMSIVLDALK 180
               F +++ +L   G K+ + ++   LL +LP  Y  +  AI+    ++LT++ V + L 
Sbjct: 121  FHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLL 180

Query: 181  TRNLEIKKERKD--GELLMARGRSEKKSWKG---KERSFRSKS--KGKSR---KCFLCHK 240
             + ++IK +  D   +++ A   +   ++K    K R  + K   KG S+   KC  C +
Sbjct: 181  DQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGR 240

Query: 241  EGHFKKNC-----PLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRD 300
            EGH KK+C      LN   + +  +      +  A +               V  V++  
Sbjct: 241  EGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFM---------------VKEVNNTS 300

Query: 301  IQD--AWIMDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMV 360
            + D   +++DSG + H+       T+  +V     +        V   G    AT  G+V
Sbjct: 301  VMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIA-------VAKQGEFIYATKRGIV 360

Query: 361  RI-------LTNVRYVPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSL--VKLRGTLR 420
            R+       L +V +  +   NL+S+  L  +G +I+ +   + ++K  L  VK  G L 
Sbjct: 361  RLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLN 420

Query: 421  HGLYVLEGTTVSGSAAIASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGG---VKNVE 480
            +         ++  A   + K  N   LWH+R  H+S+  L  + ++ +      + N+E
Sbjct: 421  N------VPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLE 480

Query: 481  L--PFCEHCIMGKSTRVKFGKGKHTT--KGILDYIHSDLWGPTKEVSMGGSRYFISIIDD 540
            L    CE C+ GK  R+ F + K  T  K  L  +HSD+ GP   V++    YF+  +D 
Sbjct: 481  LSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQ 540

Query: 541  FSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGI 600
            F+     Y +K K + F  F ++  + E     KV YL  DNG E+++N+  QFC  +GI
Sbjct: 541  FTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGI 600

Query: 601  TRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTAL 660
            + H TV +TPQ NG++ER  RTI E+ R +++ A L   FWGEA  TA YLINR PS AL
Sbjct: 601  SYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRAL 660

Query: 661  --NLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKD--GKLNKRALKCMFIGYPQGVKGYKL 720
              + KTP E+W  K P L+HLRVFG T Y H+K+  GK + ++ K +F+GY     G+KL
Sbjct: 661  VDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKL 720

Query: 721  WCIEKGMNKCIISRDVTFNETEM---------PYCVKEQQKQQTGDHVVTEVRIASEVRP 780
            W  +    K I++RDV  +ET M            +K+ ++ +  +      +I     P
Sbjct: 721  W--DAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFP 780

Query: 781  --SIDLDNQPPLVSEIEDTQQSEFDGIQSQQERIL----------IDERAFIEESSSNND 840
              S + DN    +  ++D+++SE     +   +I+           D   F+++S  +N 
Sbjct: 781  NESKECDN----IQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNK 840

Query: 841  L----------------------------------------------QNYQLTRDRVQRE 900
                                                              ++   R +R 
Sbjct: 841  YFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERL 900

Query: 901  RHAP-IRYGYADLVAYALTCAADSIEAE-PLTFEEAIVSDSKKQWKDAMEEELFSLHKNQ 960
            +  P I Y   D     +   A +I  + P +F+E    D K  W++A+  EL +   N 
Sbjct: 901  KTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINN 960

Query: 961  TWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL---------------------- 1020
            TW++  +P N+ ++ S+W++ +K    GN   RYKARL                      
Sbjct: 961  TWTITKRPENKNIVDSRWVFSVKYNELGN-PIRYKARLVARGFTQKYQIDYEETFAPVAR 1020

Query: 1021 --------------------MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSL 1080
                                MDV T FL+G L+E IYM  P+G  +    D VC+L+K++
Sbjct: 1021 ISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAI 1080

Query: 1081 YGLKQSPRQWYISFDTFILKQGFHRNSYDACVY-WKQSQKGTYIYLLLYVDDMILVSKDY 1140
            YGLKQ+ R W+  F+  + +  F  +S D C+Y   +      IY+LLYVDD+++ + D 
Sbjct: 1081 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDM 1140

Query: 1141 AGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSK 1200
              +   K+ L  +F M DL E+K  +G+ ++   +K  + +SQ +YV K+L K+NM +  
Sbjct: 1141 TRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK--IYLSQSAYVKKILSKFNMENCN 1200

Query: 1201 AVSTPLAS--HFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMIS 1260
            AVSTPL S  ++ L +S          E  N P  + +G +MY+M+CTRPDL  A++++S
Sbjct: 1201 AVSTPLPSKINYELLNSD---------EDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1260

Query: 1261 RFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLS 1300
            R+ S    E W+ +K VLRYLKG+  + L + ++      + G+ D+D+A     R+S +
Sbjct: 1261 RYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1320

[Close]
BLAST of Cmc05g0141481 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.6e-125
Identity = 398/1461 (27.24%), Postives = 645/1461 (44.15%), Query Frame = 0 

Query: 16   DFALWRKKIRAILVQHKVAKILD-----------EERLPD-NITESEKRDMDEMAYWTIL 75
            ++ +W +++ A+   +++A  LD            + +P  N   +  R  D++ Y  IL
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLIYSAIL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDE 135
              +S  V   V  ATT  ++W+ L  +Y     P+  ++ +  F  + DQ  +L + +D 
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYAN---PSYGHVTQLRFITRFDQLALLGKPMDH 149

Query: 136  FQKIVVDLNNIGE---KMSDENQAVILLNSLPETY-----REVKAAIKYGWDSLTMSIVL 195
             +++   L N+ +    + D+  A     SL E +     RE K       + + ++  +
Sbjct: 150  DEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANV 209

Query: 196  DALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRS---KSKGKSRKCFLCHKEGH 255
               +  N    +  +          +   SW+      RS   + K    +C +C  +GH
Sbjct: 210  VTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGH 269

Query: 256  FKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMD 315
              K CP     +++T++   T  +             T ++    L V+     + W++D
Sbjct: 270  SAKRCPQLHQFQSTTNQQQSTSPF-------------TPWQPRANLAVNSPYNANNWLLD 329

Query: 316  SGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYV 375
            SG T H+T   + L+  Q   GG  V++ D  T  +  TGS  + T    +  L  V YV
Sbjct: 330  SGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLD-LNKVLYV 389

Query: 376  PKLKRNLISLGEL---DRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLY---VLEGTTVS 435
            P + +NLIS+  L   +R        +  +K     +  L+G  +  LY   +     VS
Sbjct: 390  PNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVS 449

Query: 436  GSAAIASGKVTNMSMLWHKRLAHVSERGLQA-LSQQGLLGGVKNVELPFCEHCIMGKSTR 495
              A+  S K T+ S  WH RL H S   L + +S   L     + +L  C  C + KS +
Sbjct: 450  MFASPCS-KATHSS--WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHK 509

Query: 496  VKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFG 555
            V F     T+   L+YI+SD+W  +  +S+   RY++  +D F+R  W+YPLKQK +   
Sbjct: 510  VPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKD 569

Query: 556  KFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAER 615
             F+ +K  VEN+   ++  L +DNG EFV      +    GI+   +  +TP+ NGL+ER
Sbjct: 570  TFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSER 629

Query: 616  FNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEH 675
             +R I+E    LL++AS+P  +W  A   A YLINR P+  L L++P +   G+ P+ E 
Sbjct: 630  KHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEK 689

Query: 676  LRVFGCTAYAHVKD---GKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFN 735
            L+VFGC  Y  ++     KL  ++ +C F+GY      Y   C+     +   SR V F+
Sbjct: 690  LKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAY--LCLHIPTGRLYTSRHVQFD 749

Query: 736  ETEMPYC-----VKEQQKQQT-------------------------GDHVVTEVRIASEV 795
            E   P+      V   Q+Q++                         G H+ T  R  S  
Sbjct: 750  ERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSP 809

Query: 796  RP----------------SIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEE 855
             P                S    ++P   S       ++    Q+      I        
Sbjct: 810  SPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNS 869

Query: 856  SSSNNDLQNYQLTRDR--------------------------------------VQRERH 915
             S N+  QN  L +                                        +Q    
Sbjct: 870  PSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQ 929

Query: 916  APIR-YGYA-----------DLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEE 975
            AP+  +  A              +YA + AA+S   EP T  +A+  D   +W+ AM  E
Sbjct: 930  APVNTHSMATRAKDGIRKPNQKYSYATSLAANS---EPRTAIQAMKDD---RWRQAMGSE 989

Query: 976  LFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL------------- 1035
            + +   N TW LV P PP+  ++  +WI+  K  + G S  RYKARL             
Sbjct: 990  INAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRPGLDY 1049

Query: 1036 -----------------------------MDVTTTFLHGELEEVIYMAQPKGYEVKGKED 1095
                                         +DV   FL G L + +YM+QP G+  K + D
Sbjct: 1050 AETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPD 1109

Query: 1096 MVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDD 1155
             VCRL K++YGLKQ+PR WY+   T++L  GF  +  D  ++  Q  + + IY+L+YVDD
Sbjct: 1110 YVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGR-SIIYMLVYVDD 1169

Query: 1156 MILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLE 1215
            +++   D   +      LS  F +K+  +L   LG++ KR  +   L +SQ  Y + LL 
Sbjct: 1170 ILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQRRYTLDLLA 1229

Query: 1216 KYNMSSSKAVSTPLASHFRL---SSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPD 1275
            + NM ++K V+TP+A+  +L   S ++ P   +         Y   VGS+ YL   TRPD
Sbjct: 1230 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE---------YRGIVGSLQYLAF-TRPD 1289

Query: 1276 LGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAA 1300
            L YA++ +S++M  P  +HW A+K VLRYL G+    +   +    +  L  ++DAD+A 
Sbjct: 1290 LSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK--GNTLSLHAYSDADWAG 1349

[Close]
BLAST of Cmc05g0141481 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.6e-122
Identity = 394/1473 (26.75%), Postives = 656/1473 (44.53%), Query Frame = 0 

Query: 16   DFALWRKKIRAILVQHKVAKILD-EERLPD-----------NITESEKRDMDEMAYWTIL 75
            ++ +W +++ A+   +++A  LD    +P            N   +  +  D++ Y  +L
Sbjct: 30   NYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLIYSAVL 89

Query: 76   LYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDE 135
              +S  V   V  ATT  ++W+ L  +Y   S  +   ++ +   +    +K +++ +  
Sbjct: 90   GAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKG-TKTIDDYMQG 149

Query: 136  FQKIVVDLNNIGEKMSDENQAVILLNSLPETYREV--KAAIKYGWDSLT----------- 195
                   L  +G+ M  + Q   +L +LPE Y+ V  + A K    +LT           
Sbjct: 150  LVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHES 209

Query: 196  ----------MSIVLDALKTRNLEIKKERKDG----ELLMARGRSEKKSWKGKERSF--- 255
                      + I  +A+  RN        +G            +  K W+    +F   
Sbjct: 210  KILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN 269

Query: 256  RSKSKGKSRKCFLCHKEGHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYE 315
             ++SK    KC +C  +GH  K C             +    + S+  +    S  T ++
Sbjct: 270  NNQSKPYLGKCQICGVQGHSAKRC-------------SQLQHFLSSVNSQQPPSPFTPWQ 329

Query: 316  SAEVLMVSHRDIQDAWIMDSGCTFHMTPHRDFLTNFQKVDGG-KVLLGDNGTCDVKGTGS 375
                L +      + W++DSG T H+T   + L+  Q   GG  V++ D  T  +  TGS
Sbjct: 330  PRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGS 389

Query: 376  VQIATHDGMVRILTNVRYVPKLKRNLISLGEL-DRSGCTIK--SENGVMKVTKGSLVKLR 435
              ++T    +  L N+ YVP + +NLIS+  L + +G +++    +  +K     +  L+
Sbjct: 390  TSLSTKSRPLN-LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQ 449

Query: 436  GTLRHGLY---VLEGTTVSGSAAIASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGV 495
            G  +  LY   +     VS  A+  S K T+ S  WH RL H +   L ++     L  V
Sbjct: 450  GKTKDELYEWPIASSQPVSLFAS-PSSKATHSS--WHARLGHPAPSILNSVISNYSL-SV 509

Query: 496  KNVELPF--CEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWGPTKEVSMGGSRYFISII 555
             N    F  C  C++ KS +V F +    +   L+YI+SD+W  +  +S    RY++  +
Sbjct: 510  LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFV 569

Query: 556  DDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSE 615
            D F+R  W+YPLKQK +    F+ +K  +EN+   ++    +DNG EFV     ++    
Sbjct: 570  DHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQH 629

Query: 616  GITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPST 675
            GI+   +  +TP+ NGL+ER +R I+E    LL++AS+P  +W  A   A YLINR P+ 
Sbjct: 630  GISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTP 689

Query: 676  ALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVK---DGKLNKRALKCMFIGYPQGVKGYK 735
             L L++P +   G +P+ + LRVFGC  Y  ++     KL+ ++ +C+F+GY      Y 
Sbjct: 690  LLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAY- 749

Query: 736  LWCIEKGMNKCIISRDVTFNETEMPYC--------VKEQQKQQT---GDHVVTEVR---- 795
              C+    ++  ISR V F+E   P+         V+EQ+++ +     H     R    
Sbjct: 750  -LCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVL 809

Query: 796  -----------IASEVRPSIDLDNQPPLVSEIEDTQQSEF-----------DGIQSQQER 855
                             PS    N     S ++ +  S F           +G Q   + 
Sbjct: 810  PAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQP 869

Query: 856  ILIDERAFIEESSSNNDLQN---YQLTRDR------------------------------ 915
                 +    +++S N+  N    QL +                                
Sbjct: 870  TQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSIL 929

Query: 916  ----------VQRERHAPIR------YGYADLV----AYALTCAADSIEAEPLTFEEAIV 975
                      V     AP+          A ++     Y+L  +  + E+EP T   AI 
Sbjct: 930  IHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSL-AAESEPRT---AIQ 989

Query: 976  SDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKPGTGGNSKPRYKAR 1035
            +   ++W++AM  E+ +   N TW LVP PP+   ++  +WI+  K  + G S  RYKAR
Sbjct: 990  ALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKAR 1049

Query: 1036 L------------------------------------------MDVTTTFLHGELEEVIY 1095
            L                                          +DV   FL G L + +Y
Sbjct: 1050 LVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVY 1109

Query: 1096 MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQS 1155
            M+QP G+  K + + VC+L K+LYGLKQ+PR WY+    ++L  GF  +  D  ++  Q 
Sbjct: 1110 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1169

Query: 1156 QKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1215
             K + +Y+L+YVDD+++   D   +      LS  F +KD  EL   LG++ KR      
Sbjct: 1170 GK-SIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG-- 1229

Query: 1216 LTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLS-SSQCPVTKQERIEMSNIPYCNAVG 1275
            L +SQ  Y++ LL + NM ++K V+TP+A   +LS  S   +T           Y   VG
Sbjct: 1230 LHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE-------YRGIVG 1289

Query: 1276 SIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKST 1300
            S+ YL   TRPD+ YA++ +S+FM  P +EH +A+K +LRYL G+ +  +   +    + 
Sbjct: 1290 SLQYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK--GNTL 1349

[Close]
BLAST of Cmc05g0141481 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-37
Identity = 98/317 (30.91%), Postives = 168/317 (53.00%), Query Frame = 0 

Query: 892  MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILK 951
            MDV T FL+  ++E IY+ QP G+  +   D V  L+  +YGLKQ+P  W    +  + K
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 952  QGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGE 1011
             GF R+  +  +Y++ +  G  IY+ +YVDD+++ +        +K++L+  + MKDLG+
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGP-IYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 1012 LKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTK 1071
            + + LG+++ +    G +T+S + Y+ K   +  +++ K   TPL +   L  +  P  K
Sbjct: 121  VDKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLK 180

Query: 1072 QERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKG 1131
                     PY + VG +++     RPD+ Y +S++SRF+  P   H ++ + VLRYL  
Sbjct: 181  ------DITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYT 240

Query: 1132 SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSW-KVNLQPVVA 1191
            + S+ L Y         L  + DA + A  D   S  G++  L G  V+W    L+ V+ 
Sbjct: 241  TRSMCLKYR--SGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIP 300

Query: 1192 LSTTESEYISLGEAVKE 1208
            + +TE+EYI+  E V E
Sbjct: 301  VPSTEAEYITASETVME 307

[Close]
BLAST of Cmc05g0141481 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 2578.5 bits (6682), Expect = 0.0e+00
Identity = 1289/1303 (98.93%), Postives = 1289/1303 (98.93%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL--------- 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL         
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLILSIAVHFD 900

Query: 901  -----MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFD 960
                 MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFD
Sbjct: 901  MFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFD 960

Query: 961  TFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEM 1020
            TFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEM
Sbjct: 961  TFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEM 1020

Query: 1021 KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQ 1080
            KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQ
Sbjct: 1021 KDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQ 1080

Query: 1081 CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVL 1140
            CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVL
Sbjct: 1081 CPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVL 1140

Query: 1141 RYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQ 1200
            RYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQ
Sbjct: 1141 RYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQ 1200

Query: 1201 PVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHER 1260
            PVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHER
Sbjct: 1201 PVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHER 1260

Query: 1261 SKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1290
            SKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1261 SKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1303

[Close]
BLAST of Cmc05g0141481 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 2556.2 bits (6624), Expect = 0.0e+00
Identity = 1288/1344 (95.83%), Postives = 1292/1344 (96.13%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            MASTRFEVSKFNGHGDF+LWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSL NKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL--------- 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL         
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  ---------------------------------MDVTTTFLHGELEEVIYMAQPKGYEVK 960
                                             MDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1303
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1320

[Close]
BLAST of Cmc05g0141481 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 2390.9 bits (6195), Expect = 0.0e+00
Identity = 1221/1331 (91.74%), Postives = 1225/1331 (92.04%), Query Frame = 0 

Query: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYW 60
            MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAY 
Sbjct: 1    MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDEERLPDNITESEKRDMDEMAYS 60

Query: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEEN 120
            TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSK LEEN
Sbjct: 61   TILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEEN 120

Query: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKT 180
            LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLTMSIVLDALKT
Sbjct: 121  LDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKT 180

Query: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240
            RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN
Sbjct: 181  RNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNCPLN 240

Query: 241  KSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300
            KSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT
Sbjct: 241  KSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWIMDSGCTFHMT 300

Query: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360
            PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS
Sbjct: 301  PHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRYVPKLKRNLIS 360

Query: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSM 420
            LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVT+MSM
Sbjct: 361  LGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTDMSM 420

Query: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480
            LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY
Sbjct: 421  LWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDY 480

Query: 481  IHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540
            +HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK
Sbjct: 481  VHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVENQTGRK 540

Query: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600
            VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA
Sbjct: 541  VKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTRCLLTNA 600

Query: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660
            SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK
Sbjct: 601  SLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYAHVKDGK 660

Query: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720
            LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH
Sbjct: 661  LNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVKEQQKQQTGDH 720

Query: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDERAFIEESSSNN 780
            VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE AFIEESSSNN
Sbjct: 721  VVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEGAFIEESSSNN 780

Query: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840
            DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD
Sbjct: 781  DLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAIVSDSKKQWKD 840

Query: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL--------- 900
            AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARL         
Sbjct: 841  AMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKE 900

Query: 901  ---------------------------------MDVTTTFLHGELEEVIYMAQPKGYEVK 960
                                             MDVTT FLHGELEEVIYMAQPKGYEVK
Sbjct: 901  GVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIYMAQPKGYEVK 960

Query: 961  GKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020
            GKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL
Sbjct: 961  GKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLL 1020

Query: 1021 YVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVI 1080
            YVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGLLTISQESYVI
Sbjct: 1021 YVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGLLTISQESYVI 1080

Query: 1081 KLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140
            KLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP
Sbjct: 1081 KLLEKYNMSDSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRP 1140

Query: 1141 DLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYA 1200
            DLGYAMS                          SASVSLCYSRDCDKSTLLEGFTDADYA
Sbjct: 1141 DLGYAMS--------------------------SASVSLCYSRDCDKSTLLEGFTDADYA 1200

Query: 1201 ADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGEL 1260
            ADLDKR  L                       L    +EYISLGEAVKEAVWLKRIVGEL
Sbjct: 1201 ADLDKRSQL----------------------LLCRLRTEYISLGEAVKEAVWLKRIVGEL 1260

Query: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1290
            LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS
Sbjct: 1261 LSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLS 1283

[Close]
BLAST of Cmc05g0141481 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 2241.5 bits (5807), Expect = 0.0e+00
Identity = 1123/1174 (95.66%), Postives = 1126/1174 (95.91%), Query Frame = 0 

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 1    MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 60

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEITDG DSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 61   GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGYDSAETGYESAEVLMVSHRDIQDAWI 120

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY
Sbjct: 121  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 180

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI
Sbjct: 181  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 240

Query: 411  ASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVT+MSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 241  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 300

Query: 471  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KHTTKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 301  KHTTKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 360

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 361  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 420

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 421  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 480

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 481  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 540

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDER 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE 
Sbjct: 541  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 600

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 601  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 660

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR
Sbjct: 661  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKAR 720

Query: 891  L------------------------------------------MDVTTTFLHGELEEVIY 950
            L                                          MDVTT FLHGELEEVIY
Sbjct: 721  LVAKGYTQKEGVDFHEIFSPVVRHSSIRLILSIAVHFDMFIEQMDVTTAFLHGELEEVIY 780

Query: 951  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYISFDTFILKQGFHRNSYDACVYWKQS 1010
            MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYI FDTFILKQGFHRNSYDACVYWKQS
Sbjct: 781  MAQPKGYEVKGKEDMVCRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKQS 840

Query: 1011 QKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGL 1070
            QKGTYIYLLLYVDDMILVSKDYA ICELKKQLSNEFEMKDLGELKRILGMDVKRD+EKGL
Sbjct: 841  QKGTYIYLLLYVDDMILVSKDYAEICELKKQLSNEFEMKDLGELKRILGMDVKRDKEKGL 900

Query: 1071 LTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 1130
            LTISQESYVIKLLEKYNMS SKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS
Sbjct: 901  LTISQESYVIKLLEKYNMSGSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGS 960

Query: 1131 IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1190
            IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL
Sbjct: 961  IMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTL 1020

Query: 1191 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1250
            LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA
Sbjct: 1021 LEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEA 1080

Query: 1251 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1303
            VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL
Sbjct: 1081 VWLKRIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVEL 1140

[Close]
BLAST of Cmc05g0141481 vs. ExPASy TrEMBL
Match: A0A5A7TP18 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001600 PE=4 SV=1)

HSP 1 Score: 2007.6 bits (5200), Expect = 0.0e+00
Identity = 1044/1193 (87.51%), Postives = 1061/1193 (88.94%), Query Frame = 0 

Query: 111  MDQSKILEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGWDSLT 170
            MDQSK LEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYG DSLT
Sbjct: 1    MDQSKSLEENLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLT 60

Query: 171  MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 230
            MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE
Sbjct: 61   MSIVLDALKTRNLEIKKERKDGELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKE 120

Query: 231  GHFKKNCPLNKSREASTSEANVTDGYNSAEITDGCDSAETGYESAEVLMVSHRDIQDAWI 290
            GHFKKNCPLNKSREASTSEANVTDGYNSAEIT+G DSAETGYESAEVLMVSHRDIQDAWI
Sbjct: 121  GHFKKNCPLNKSREASTSEANVTDGYNSAEITNGYDSAETGYESAEVLMVSHRDIQDAWI 180

Query: 291  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVRY 350
            MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNV Y
Sbjct: 181  MDSGCTFHMTPHRDFLTNFQKVDGGKVLLGDNGTCDVKGTGSVQIATHDGMVRILTNVLY 240

Query: 351  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAI 410
            VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKL+GTLRHGLYVLEGTTVSGSAAI
Sbjct: 241  VPKLKRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLKGTLRHGLYVLEGTTVSGSAAI 300

Query: 411  ASGKVTNMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 470
            ASGKVT+MSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG
Sbjct: 301  ASGKVTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKG 360

Query: 471  KHTTKGILDYIHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 530
            KH TKGILDY+HSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK
Sbjct: 361  KHITKGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWK 420

Query: 531  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 590
            KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM
Sbjct: 421  KQVENQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIM 480

Query: 591  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 650
            ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC
Sbjct: 481  ERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGC 540

Query: 651  TAYAHVKDGKLNKRALKCMFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 710
            TAYAHVKDGKLNKRALKC+FIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK
Sbjct: 541  TAYAHVKDGKLNKRALKCIFIGYPQGVKGYKLWCIEKGMNKCIISRDVTFNETEMPYCVK 600

Query: 711  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDER 770
            EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDE 
Sbjct: 601  EQQKQQTGDHVVTEVRIASEVRPSIDLDNQPPLVSEIEDTQQSEFDGIQSQQERILIDEG 660

Query: 771  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 830
            AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI
Sbjct: 661  AFIEESSSNNDLQNYQLTRDRVQRERHAPIRYGYADLVAYALTCAADSIEAEPLTFEEAI 720

Query: 831  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKA- 890
            VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKP    +S     + 
Sbjct: 721  VSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPVVRHSSIRLILSI 780

Query: 891  --------RLMDVTTTFLHGELEEVIYMAQPKGYEVKGKE-----DMVCRLHKSLYGLKQ 950
                      MDVTTTFLHGELEEVIYMAQPKGYEVKGKE     DMVCRLHKSLYGLKQ
Sbjct: 781  AVHFDMFIEQMDVTTTFLHGELEEVIYMAQPKGYEVKGKEDMVCRDMVCRLHKSLYGLKQ 840

Query: 951  SPRQWYISFDTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICEL 1010
            SPRQWYI FDTFILKQG                  T  +++L           + G   L
Sbjct: 841  SPRQWYIRFDTFILKQG-----------------STETHMMLV----------FTG-NNL 900

Query: 1011 KKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPL 1070
            KK  ++ +      ELKRILGMDVKRD+EKGLLTISQESYVIKLLEKYNMS SKAVSTPL
Sbjct: 901  KKVRTSIY----CCELKRILGMDVKRDKEKGLLTISQESYVIKLLEKYNMSDSKAVSTPL 960

Query: 1071 ASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGK 1130
            ASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS           
Sbjct: 961  ASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMS----------- 1020

Query: 1131 EHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYG 1190
                           SASVSLCYSRDCDKSTLLEGFTDADYAADLDKR  L         
Sbjct: 1021 ---------------SASVSLCYSRDCDKSTLLEGFTDADYAADLDKRSQL--------- 1080

Query: 1191 NVVSWKVNLQPVVALSTTESEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQSAIH 1250
                          L    +EYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQ+AIH
Sbjct: 1081 -------------LLCRLRTEYISLGEAVKEAVWLKRIVGELLSQEFIPIIHCDSQNAIH 1113

Query: 1251 LAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1290
            LAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR
Sbjct: 1141 LAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHTVENLSDMLTKALSAHR 1113

[Close]
BLAST of Cmc05g0141481 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 238.0 bits (606), Expect = 4.2e-62
Identity = 159/494 (32.19%), Postives = 252/494 (51.01%), Query Frame = 0 

Query: 812  LTCAADSIEAEPLTFEEAIVSDSKKQWKDAMEEELFSLHKNQTWSLVPKPPNQKLIQSKW 871
            L C A +   EP T+ EA        W  AM++E+ ++    TW +   PPN+K I  KW
Sbjct: 77   LVCIAKA--KEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKW 136

Query: 872  IYKIKPGTGGNSKPRYKARL---------------------------------------- 931
            +YKIK  + G  + RYKARL                                        
Sbjct: 137  VYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 196

Query: 932  --MDVTTTFLHGELEEVIYMAQPKGYEVKGKEDM----VCRLHKSLYGLKQSPRQWYISF 991
              +D++  FL+G+L+E IYM  P GY  +  + +    VC L KS+YGLKQ+ RQW++ F
Sbjct: 197  HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 256

Query: 992  DTFILKQGFHRNSYDACVYWKQSQKGTYIYLLLYVDDMILVSKDYAGICELKKQLSNEFE 1051
               ++  GF ++  D   Y+ +     ++ +L+YVDD+I+ S + A + ELK QL + F+
Sbjct: 257  SVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFK 316

Query: 1052 MKDLGELKRILGMDVKRDREKGLLTISQESYVIKLLEKYNMSSSKAVSTPLASHFRLSSS 1111
            ++DLG LK  LG+++ R      + I Q  Y + LL++  +   K  S P+      S+ 
Sbjct: 317  LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 376

Query: 1112 QCPVTKQERIEMSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWV 1171
                +  + ++     Y   +G +MYL I TR D+ +A++ +S+F   P   H +AV  +
Sbjct: 377  ----SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 436

Query: 1172 LRYLKGSASVSLCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNL 1231
            L Y+KG+    L YS   +    L+ F+DA + +  D RRS +G+   L  +++SWK   
Sbjct: 437  LHYIKGTVGQGLFYSSQAEMQ--LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 496

Query: 1232 QPVVALSTTESEYISLGEAVKEAVWLKRIVGEL-LSQEFIPIIHCDSQSAIHLAKNPSHH 1259
            Q VV+ S+ E+EY +L  A  E +WL +   EL L      ++ CD+ +AIH+A N   H
Sbjct: 497  QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 552

[Close]
BLAST of Cmc05g0141481 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25
Identity = 81/237 (34.18%), Postives = 125/237 (52.74%), Query Frame = 0 

Query: 974  IYLLLYVDDMILVSKDYAGICELKKQLSNEFEMKDLGELKRILGMDVKRDREKGLLTISQ 1033
            +YLLLYVDD++L       +  L  QLS+ F MKDLG +   LG+ +K     GL  +SQ
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIK-THPSGLF-LSQ 60

Query: 1034 ESYVIKLLEKYNMSSSKAVSTPLASHFRLSSSQCPVTKQERIEMSNIPYCNAVGSIMYLM 1093
              Y  ++L    M   K +STPL    +L+SS       +  +  +I     VG++ YL 
Sbjct: 61   TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQYLT 120

Query: 1094 ICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLLEGFT 1153
            + TRPD+ YA++++ + M  P    +  +K VLRY+KG+    L   ++   +  ++ F 
Sbjct: 121  L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN--VQAFC 180

Query: 1154 DADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALSTTESEYISLGEAVKEAVW 1211
            D+D+A     RRS +G    L  N++SW    QP V+ S+TE+EY +L     E  W
Sbjct: 181  DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of Cmc05g0141481 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 0 

Query: 376 GVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVTNMSMLWHKRLAHVSERGLQ 435
           GV+KV KG    L+G     LY+L+G+  +G + +A     + + LWH RLAH+S+RG++
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAE-TAKDETRLWHSRLAHMSQRGME 86

Query: 436 ALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTTKGILDYIHSDLWG 488
            L ++G L   K   L FCE CI GK+ RV F  G+HTTK  LDY+HSDLWG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]
BLAST of Cmc05g0141481 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.1e-17
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 586 NRTIMERTRCLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHL 645
           NRTI+E+ R +L    LP  F  +AA TA ++IN+ PSTA+N   P EVW    P+  +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 646 RVFGCTAYAHVKDGKLNKRALK 668
           R FGC AY H  +GKL  RA K
Sbjct: 62  RRFGCVAYIHCDEGKLKPRAKK 83

[Close]
BLAST of Cmc05g0141481 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.9e-07
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 0 

Query: 1090 MYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVSLCYSRDCDKSTLL 1149
            MYL I TRPDL +A++ +S+F S       +AV  VL Y+KG+    L YS   D    L
Sbjct: 1    MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ--L 60

Query: 1150 EGFTDADYAADLDKRRSLSG 1170
            + F D+D+A+  D RRS++G
Sbjct: 61   KAFADSDWASCPDTRRSVTG 77

The following BLAST results are available for this feature:
BLAST of Cmc05g0141481 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047995.10.0e+0098.93retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa... [more]
KAA0050719.10.0e+0095.83putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYK25306.10.0e+0091.74putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYK13826.10.0e+0095.66putative polyprotein [Cucumis melo var. makuwa][more]
KAA0043826.10.0e+0087.51putative gag-pol polyprotein [Cucumis melo var. makuwa][more]
BLAST of Cmc05g0141481 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109781.3e-27339.55Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041466.9e-16329.25Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.6e-12527.24Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.6e-12226.75Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256003.5e-3730.91Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of Cmc05g0141481 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U2U70.0e+0098.93Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku... [more]
A0A5A7UB250.0e+0095.83Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A5D3DNU10.0e+0091.74Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A5D3CTV20.0e+0095.66Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488... [more]
A0A5A7TP180.0e+0087.51Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
BLAST of Cmc05g0141481 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.14.2e-6232.19cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.1e-2534.18DNA/RNA polymerases superfamily protein [more]
ATMG00300.12.0e-2447.32Gag-Pol-related retrotransposon family protein [more]
ATMG00710.19.1e-1748.78Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
ATMG00240.12.9e-0742.50Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 223..239
e-value: 0.004
score: 26.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 222..238
score: 9.553822
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 395..462
e-value: 3.1E-16
score: 59.0
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 480..576
e-value: 1.1E-10
score: 41.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 471..639
score: 24.182333
NoneNo IPR availableGENE3D4.10.60.10coord: 196..251
e-value: 2.0E-6
score: 29.5
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 55..179
e-value: 6.1E-28
score: 97.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 889..1170
coord: 2..891
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1150..1287
e-value: 4.46828E-66
score: 217.336
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 470..650
e-value: 5.5E-45
score: 155.1
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 892..1056
e-value: 3.7E-42
score: 144.6
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 892..1255
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 479..648
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 208..243

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc05g0141481.1Cmc05g0141481.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding