Cmc05g0140431 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0140431
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RNA polymerase II-associated protein 3 isoform X1
Location	CMiso1.1chr05: 24850208 .. 24856742 (+)
RNA-Seq Expression	Cmc05g0140431
Synteny	Cmc05g0140431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAAACGTCGTATGTTATGTTTGTGGGCTATGCTATTTTTCGCTTTGGCCCAATCGGTTAGGATTTCTACGGACTTTGAATCCTCGGCGGTCACTCCGACCGGCGAACACCTCTGGACGCTTCCAGAAGCTCTTTCGAAGACCATCTGCTACTATTTTCCATTTTCCCTTTATTCGTCTCTACTCTTTCTTTCTTTCTTCTGCTCTTCCATGGCCGATTCCTCCGGCAAGCACGGCCGCGATCACCCTCTGGTATTCCCATTTTCTCTCAACCTGCTCTCTAGTGTAGTTCAGACATTGAACACTTTCTTACCCCGTTGCTTGAAAAACGAGGAGAAATATATAGTTTGTAGCTTTGAGTCGAGTTTCCAATTTTTGTGTATTTTTCATTGTTTGTGGAAATGAAGCGGGCTGGCGATGTATGCAACTCCCCTGTCTATTTCCTCGTGTTTACTGGATGTTGGAATTCGGTGGGGTTTGATGATGTAAAGTTCTGTTCACTTGCATTGAAGTGATTGATGGGGTGAATGTATTGAAATAGGGATTAGAAATTGATATCTGAAATCATTGTTGTTGGTGTGTTAAGTTAAGTTAGATGCTGGCTGTGTTTGTTGGCTTTTCTTATTGAGTTGTATGTGTTTTGGACGCATTCTTTTTCTCCAGGATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAAGTCTCATTTAAGGGAAAAGACAAGAAACTGAAGCCACAGGCCATTGGAAAAGAAAAGGAGGTATTAACTCTATCAAATTTTCCGTTGCACAGTGAACTGCACATTTTAAAAACAAGAAACTACTGTCTCGGATGCCATTATTTACAGTGGTTTATGTTTTGAAGAAAAACCTGGTGCTAATTTTTCAATTGTGCATGCATTGATAATAACTTTTATACTCTCTTATTGAAGTTGGCTTTGTGCATGATAGAGATGTTCTGGAGAATAGTGTTGTTACATTTTTTGATAAATAATATTAGTATTATTTGAGGGTCACCTTAAGTAATGTCATAGCTAACCAGGATAGAAGGCAGACAGAAAAAGCTTCAGCAGCAGATTACTTGAAGCAATATGATGCGGTTAACCGTCTATCAAGAAATTTTCAGACTGAACAGAGTTTTGTTGATGCTGCTTCAGAGAAAGAACAGGTAGATTGTGTTCTTTTGCTCATGTTTATATGATGGAGAGATAATTGGTGTAGCCATGAAGGGCCTCGACTCCTGACTGCATGTGTGTATGATATATCTTCGTATTCCAGGGTAATGAGTATTTTAAGCAAAAGAAGTTCAAAGAAGCCATTGACTGCTATTCAAGAAGTATTGCTTTGTCCCCAACAGCTGTAGCCTTTGCAAATAGGGCTATGGCCTACCTAAAAATCAGGAGGCAAGTTTCAGTCCATAGATTCTAAGCTTTCCTTCATTTAGATGGATATGTATGGGATCTGTTTATGATGTTCCTTGAAAATAGGTCTTTGCTTCTCGCTTTCTGTCACTTACATTTCTTGAAATGAATTAATACACCTATGTCTCTAAATAGTGCTCTTGATGAGGCAAGCTATGAGTCGATGACTATTAAATGTGTTAACATTGTTGATTTCTTTGTTATCCTCTTGTTTCCACCTTCCTTGAGTCAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGGTACATCAAAGCATACTCGCGCAGAGCAACAGCTAGAAAGGAACTTGGGAAGGCTAAAGAGGCCTTGGAGGGTACAAAATTAATCACTTCAATTGCATGTGGATCTTTTTGTGATTTTTATTTGACTGATGTATTTGACTGATTGCAGATGCTGAATTTGCCCAGAGATTGGAGCCTAACAACCAGGAGATCAAGAAGCAGCATGCTGATCTCAGAGCTTTTGTTGGGAAGGTAAGTTTAGCATTAATATTTAAGATGATTTTTGTTAAATCTGGATCTCTCTTGAACTATTTACTGGTGAATGTGGGAGACAAAGTTATGATATTTCAAATGTGTTCCGTTTGCAATACGATTTCTTTAATCCTTCTTGTACATGTATACATATCGCAGGCAATTCTTGAGAAGGCATCTGGTGCTTCAAGAAGCTCCCCCAAAGATAAGAAGATGCTTAAAAAATCAGACTCTGATGCAAAAATTCAGGACATCCCTCCTGTCTCTAGCAGCACATCAAGGACTGGATTATTGGCAGCTCGAGAACGTGTTGAGGTAGAGGTTTCTAATTTTTTAATGCCCATGGTATCCTGTATTTTCTTTTAAAACAAATTTAGTAGGGTAGTTGCCCATGTGAATGAGGTGCTTCTAAATGGATCAAAACAGACAGACAAATGAAAATGATGTCCTGTAACTTTTCAGTGAAGATCCAACCGGTCTATACTCTTAATAATTTATTCAACAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTCTCAAGTTTTCTAAAAACTATATTTTGCTATAGTATAAAACAATACTAATGTATTGCTACTTAATTTATAGCCCCCTTGTTCTGTTCCTTTTTGTAGGACTGTGTAGTGTAGTCTATTTGTTTGTTGAAGTACTCACTGGGGAGAAAATTTGCTGATAATTAATTACTTTTACTGCTTATATCTTGACCGTGGTGTCCTTTTCTGTATTTGTATTAAGTTTCTTCCCTTAAATTGGCTGAATACGATGGGGCAACCCCCACCTCCCACCCAAGATTTCCTGTAGAGAATTGTAGTGCATGTTTACCCCCACCCCCTGGTAATGAATTTAAAGATGATATTTCTTATTCTGAAGCTGGGTGTCAGCCTTATGGTGTTTGAGGCTTTTGGATTCTGTTCTTAGGAAAATGGTGGGGAAAATGCTGTCAAGACATCAGCACGTGTAGAAGAAAATGAGGACATAAGTACAAGAGCTGAAATCGCTTGCAAAAAAGTAGCAACAAATGGTTTTCACAAAGACTCAAGTTCATATTTGTGGGCATTGGAGGTCTCTTAAGATCCATTTGAACTCTATTTTCTGCGTTGTACACTGCCTTTTTATTGATGGTTCCCATTTTTATGTTAGTTAAGTATATACCATTTTTTGTTCCAAAGAAACACAAGCAAGATGCTGCAATAGTTTCTTCTTTGTTAACAATTGCAGAATTCATCTTTAAAATGTCATTGAAATCAAATAGAAGCTTGCCTAAGTTCCTATTTAGGCTATTCCCTTCACATCCTGTGCTTCTGCAGCTCATTCTATAACTCTTGCTTTAAACATTCTCTACTCAGAAATGAAAGGGTCGATGAAGTTATCATGATTATATTGACCTTTTATAAATAAGCCTGTGATATTTGATGAGAGGTTCAATATCTTAACGAGTTCACATTCTGATCTTCAATTTTTTTTCAAGGCATGTTTGAATAGAGAATTAGACTATTGTTGTTCGAGTCCTTGAAGAGGCTTAGGTCGATTTTGACCTTGCTTGAACAAGAAATGTTCTATAAATTGTACAATCGTGTCCTTGAGTTCTGAAGAGACTTGGGTTGATTATTAAAGGGTGACTTAAGTAAGGCCCTCGATTGGTAGGCTTGAAACCCTAAACCTTAAACTCTAAACCAAAGAGCTCTATCAAGCCTATCTATTCACTGAGTAGGAAACTTCTAGCTCTAAAATCAACTGATGTAGGCCAGATATATCATATACTTGATTCTGTCACAAGCTATGCAAATGAGACTCATTGTCAACCGTACACTTAGGAATGAGGACTAGGAATAAGAGTGGTCCTTTTCAGCTTTCTTTGAGGGATTATTTTAAAGGTAATCTCTAATGACAACTTATGAAGAAGCTCAAGCCTTGTTCAAGAAAGACCCAAAAGCCAAAAGATCACCTTCATAATTAGTTGAATTGAAGCCCATCCATCCAAAGTTCTAAAGTTCCAAAGTAGGGACCTTAAATCATAGGGAGGTAAAAGGCTTAATTTGTGAACCATGTTGTCAGCTCATGCACAAGGATACCATAGCCTATTCCCTATGTATCTCTGCCACTAATTCTTTCTGATACAATGATGTCTAAATCCTTTTGTTTTCATACGTATCCACTCTCCTGCCAATATTTTTTACAGAGAGATCATCTTCCGAGAAAGCCGGAACTGAAGGCATCAGTGCAAGAACTTGCTTCTCAAGCAGCTTCCAGAAGCATGGTTGAAGCTGCAAAAAACATTATAGCCCCAACTACTGCCTATCAATTCGAAGTTTCTTGGAGAGGATTCTCTGATGATCAAGCATTGCAGGCTTGTCTTTTAAAGGTATCTAATCTAATATAGGCAGACTGAGACTATGCTGTTCCTGGTGCTGTCTGCTGTGTTCATTTGTCCATCCAAGATAATATAAACATATGTAGTTGCTCAAAGATAATATAAACATATGTAGTTGGCTATATATAAAAATTGTTTGATAAATATTAGAAGCTTGCTGCCATTTTTATTTGTTTTATAATTTTAACGGAATTTTTTTTCTTATTAGACCATCTCTCCAGCCAAGTTGCCTCAGATATTCAAAAATGCATTAACCGCTCCAATTTTAATAGACATTGTCAAGTGTGTGGCTACATTTTTCACGTAAGTTGAAAATTTCTAACTTGTCCTAGGAACATTTAGATTATGATTTAAAACATCCATGGTTAATAGACTGTACTGGATGATCATTTTGCAGTGAAGAACCGGCTTTGGCCATCAGTTTTTTAGAAAATTTAGTCAAAGTCCCGAGGTTCAGCATACTGATGATGTGTCTTTCATCCTCTGAAAAGTTCGGTAAGTTGTAGAACCTTCATTTAGTATTTACTTTTTTCCTATGTTTCTAACCTTCTTGATTGAAAGTTTAGCATCAACATTTGCAACCAAATTTGTTAGGTAAAAAAATTGGCTAAGATTAATTGAATGTATTGTACTTACTATGTCCTTAAACAACATAGGCATTCACTCTGAAGCCTTCTGGTCAATTTACTCCTTCTCTGATGTATGTCAATTTGATATTGTTTATACCTTCGTGGGTGGACTCCTTTCTTTTGCGTTTGTTTCTTTCTTTCCTTTATTTTCCTCTTTTTTTCCTTTCCTTTTATTTTCTTTTTTTCTTTTTTTCTTTTCATAATCATTTTCTCAAATAAGAAAAAGAAAAACAATATCCTGTGTAGCACGGGGATGCTTCAGAACGAATATGTGCAGCAGACTTATTGAGTCATATTTGAGCTGGGAATTTAGAATACCCCTTTATTGTCTTGTCATCAGCCAGTATCCTGATCTTGAAGAAGTTATCTACATGTCTGAGTTCTAGCTTCTATCTCTATTTAAAACCAAATTTAAATATAGGGTGAAGATGGTAAGCATGAAAAATATTCACTGTTGAGGAGGTGAATACAAAATGCTATAATTCATATTTTAATGGATAAATTTATAGAGGAACTTGGATTTTATAAATCTTCCTGATGTTTCAGCTGGACTTTGAGTTCCGACTTGAAGACCTTATATTTTGTTAGGAACTGAAATGTATATCTGGATTGTCTACCCAAATAACAGCAGGGAATCTAAGGGCTTATCATAGCAAAATGTTTTGTTTATTCGTACTAATTTTAAAGCGCTTTGTGAAACAGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCAATTGAGTATGCAGAAATGCTCGACAGCTTGCGTTCAAAGTACTTTCTTAAACAATGACAGACGTTTCTTTAGCTGCCTCTCTAAAGCCAACCCAGCTGCTTATCTTCAGTGTAAAGTATCCAATTATTCTGTTTTTGGGATCATAATTTGGCATGTTGACATATCTAACTCACGCAATGAAGTTAAATGTTACGAAAAGTGTCTTCTTTTCTACCCTCTTCCACATGCTAGAAAATCATTAGAACTTGGTCGGTAGAAGTCTCGGGCTTGAATTCTCGACATTTCCAAACTTATGATCACAAAAGCTTGCATCAAAAGAAGAATAAGGTAACTGGTTTCTAACTTTCTACAAGTATACGACCTTGCTGGACTTATTCTATAGGTTATACAACTCCTTCCTTGAGTTCTAAGATTAGTATATTGACCACTAAGGTAGTAGGGCCCTTGGAGGGCTGAGTTGCGCTATCATGTGTGTTGTTTTAGTGCACTGCCACATGCAGGAAGATAATTGAATGGTCCTTGCTACTGGACCATCCTGAACTCAAAAGTCTTTATGTGAATATGTAGGTTTTGCATTTTTCATTGGTACTTAAGATATGCTGTTGCATCACAATCTAGTTGGGGTCCAGAGTTTAAAATGGCCTGAGACAAATCATATGTCCTATTTTGCAATTCTATGATATATGGGTGTCCACATTGCTTTCAGTCCATCTTTTTGCTTGTTGTTATAACTTTATGAGTACTTATTTTTGTTGACCCTCTCTCTCTATCTTCGTCATGTCGATATGTGTTTGATGTTTTAAGACTTCTTTATATAAGTGATCAA

mRNA sequence

TCCAAAACGTCGTATGTTATGTTTGTGGGCTATGCTATTTTTCGCTTTGGCCCAATCGGTTAGGATTTCTACGGACTTTGAATCCTCGGCGGTCACTCCGACCGGCGAACACCTCTGGACGCTTCCAGAAGCTCTTTCGAAGACCATCTGCTACTATTTTCCATTTTCCCTTTATTCGTCTCTACTCTTTCTTTCTTTCTTCTGCTCTTCCATGGCCGATTCCTCCGGCAAGCACGGCCGCGATCACCCTCTGGATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAAGTCTCATTTAAGGGAAAAGACAAGAAACTGAAGCCACAGGCCATTGGAAAAGAAAAGGAGGATAGAAGGCAGACAGAAAAAGCTTCAGCAGCAGATTACTTGAAGCAATATGATGCGGTTAACCGTCTATCAAGAAATTTTCAGACTGAACAGAGTTTTGTTGATGCTGCTTCAGAGAAAGAACAGGGTAATGAGTATTTTAAGCAAAAGAAGTTCAAAGAAGCCATTGACTGCTATTCAAGAAGTATTGCTTTGTCCCCAACAGCTGTAGCCTTTGCAAATAGGGCTATGGCCTACCTAAAAATCAGGAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGGTACATCAAAGCATACTCGCGCAGAGCAACAGCTAGAAAGGAACTTGGGAAGGCTAAAGAGGCCTTGGAGGATGCTGAATTTGCCCAGAGATTGGAGCCTAACAACCAGGAGATCAAGAAGCAGCATGCTGATCTCAGAGCTTTTGTTGGGAAGGCAATTCTTGAGAAGGCATCTGGTGCTTCAAGAAGCTCCCCCAAAGATAAGAAGATGCTTAAAAAATCAGACTCTGATGCAAAAATTCAGGACATCCCTCCTGTCTCTAGCAGCACATCAAGGACTGGATTATTGGCAGCTCGAGAACGTGTTGAGAGAGATCATCTTCCGAGAAAGCCGGAACTGAAGGCATCAGTGCAAGAACTTGCTTCTCAAGCAGCTTCCAGAAGCATGGTTGAAGCTGCAAAAAACATTATAGCCCCAACTACTGCCTATCAATTCGAAGTTTCTTGGAGAGGATTCTCTGATGATCAAGCATTGCAGGCTTGTCTTTTAAAGACCATCTCTCCAGCCAAGTTGCCTCAGATATTCAAAAATGCATTAACCGCTCCAATTTTAATAGACATTGTCAAGTGTGTGGCTACATTTTTCACTGAAGAACCGGCTTTGGCCATCAGTTTTTTAGAAAATTTAGTCAAAGTCCCGAGGTTCAGCATACTGATGATGTGTCTTTCATCCTCTGAAAAGTTCGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCAATTGAGTATGCAGAAATGCTCGACAGCTTGCGTTCAAAGTACTTTCTTAAACAATGACAGACGTTTCTTTAGCTGCCTCTCTAAAGCCAACCCAGCTGCTTATCTTCAGTGTAAAGTATCCAATTATTCTGTTTTTGGGATCATAATTTGGCATGTTGACATATCTAACTCACGCAATGAAGTTAAATGTTACGAAAAGTGTCTTCTTTTCTACCCTCTTCCACATGCTAGAAAATCATTAGAACTTGGTCGGTAGAAGTCTCGGGCTTGAATTCTCGACATTTCCAAACTTATGATCACAAAAGCTTGCATCAAAAGAAGAATAAGGTAACTGGTTTCTAACTTTCTACAAGTATACGACCTTGCTGGACTTATTCTATAGGTTATACAACTCCTTCCTTGAGTTCTAAGATTAGTATATTGACCACTAAGGTAGTAGGGCCCTTGGAGGGCTGAGTTGCGCTATCATGTGTGTTGTTTTAGTGCACTGCCACATGCAGGAAGATAATTGAATGGTCCTTGCTACTGGACCATCCTGAACTCAAAAGTCTTTATGTGAATATGTAGGTTTTGCATTTTTCATTGGTACTTAAGATATGCTGTTGCATCACAATCTAGTTGGGGTCCAGAGTTTAAAATGGCCTGAGACAAATCATATGTCCTATTTTGCAATTCTATGATATATGGGTGTCCACATTGCTTTCAGTCCATCTTTTTGCTTGTTGTTATAACTTTATGAGTACTTATTTTTGTTGACCCTCTCTCTCTATCTTCGTCATGTCGATATGTGTTTGATGTTTTAAGACTTCTTTATATAAGTGATCAA

Coding sequence (CDS)

ATGTTATGTTTGTGGGCTATGCTATTTTTCGCTTTGGCCCAATCGGTTAGGATTTCTACGGACTTTGAATCCTCGGCGGTCACTCCGACCGGCGAACACCTCTGGACGCTTCCAGAAGCTCTTTCGAAGACCATCTGCTACTATTTTCCATTTTCCCTTTATTCGTCTCTACTCTTTCTTTCTTTCTTCTGCTCTTCCATGGCCGATTCCTCCGGCAAGCACGGCCGCGATCACCCTCTGGATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAAGTCTCATTTAAGGGAAAAGACAAGAAACTGAAGCCACAGGCCATTGGAAAAGAAAAGGAGGATAGAAGGCAGACAGAAAAAGCTTCAGCAGCAGATTACTTGAAGCAATATGATGCGGTTAACCGTCTATCAAGAAATTTTCAGACTGAACAGAGTTTTGTTGATGCTGCTTCAGAGAAAGAACAGGGTAATGAGTATTTTAAGCAAAAGAAGTTCAAAGAAGCCATTGACTGCTATTCAAGAAGTATTGCTTTGTCCCCAACAGCTGTAGCCTTTGCAAATAGGGCTATGGCCTACCTAAAAATCAGGAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGGTACATCAAAGCATACTCGCGCAGAGCAACAGCTAGAAAGGAACTTGGGAAGGCTAAAGAGGCCTTGGAGGATGCTGAATTTGCCCAGAGATTGGAGCCTAACAACCAGGAGATCAAGAAGCAGCATGCTGATCTCAGAGCTTTTGTTGGGAAGGCAATTCTTGAGAAGGCATCTGGTGCTTCAAGAAGCTCCCCCAAAGATAAGAAGATGCTTAAAAAATCAGACTCTGATGCAAAAATTCAGGACATCCCTCCTGTCTCTAGCAGCACATCAAGGACTGGATTATTGGCAGCTCGAGAACGTGTTGAGAGAGATCATCTTCCGAGAAAGCCGGAACTGAAGGCATCAGTGCAAGAACTTGCTTCTCAAGCAGCTTCCAGAAGCATGGTTGAAGCTGCAAAAAACATTATAGCCCCAACTACTGCCTATCAATTCGAAGTTTCTTGGAGAGGATTCTCTGATGATCAAGCATTGCAGGCTTGTCTTTTAAAGACCATCTCTCCAGCCAAGTTGCCTCAGATATTCAAAAATGCATTAACCGCTCCAATTTTAATAGACATTGTCAAGTGTGTGGCTACATTTTTCACTGAAGAACCGGCTTTGGCCATCAGTTTTTTAGAAAATTTAGTCAAAGTCCCGAGGTTCAGCATACTGATGATGTGTCTTTCATCCTCTGAAAAGTTCGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCAATTGAGTATGCAGAAATGCTCGACAGCTTGCGTTCAAAGTACTTTCTTAAACAATGA

Protein sequence

MLCLWAMLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSSMADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

Homology

[Close]

BLAST of Cmc05g0140431 vs. NCBI nr
Match: XP_008453365.2 (PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Cucumis melo])

HSP 1 Score: 898.3 bits (2320), Expect = 2.9e-257
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0


Query: 7   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 66
           MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS
Sbjct: 1   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 60

Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 126
           MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY
Sbjct: 61  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120

Query: 127 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 186
           LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180

Query: 187 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 246
           NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240

Query: 247 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 306
           PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300

Query: 307 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 366
           TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF
Sbjct: 301 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 360

Query: 367 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 426
           SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV
Sbjct: 361 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 420

Query: 427 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 477
           PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 421 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 470

[Close]

BLAST of Cmc05g0140431 vs. NCBI nr
Match: XP_008453348.2 (PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 875.5 bits (2261), Expect = 2.0e-250
Identity = 470/518 (90.73%), Postives = 470/518 (90.73%), Query Frame = 0


Query: 7   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 66
           MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS
Sbjct: 1   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 60

Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 126
           MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY
Sbjct: 61  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120

Query: 127 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 186
           LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180

Query: 187 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 246
           NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240

Query: 247 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 306
           PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300

Query: 307 TGLLAARERV------------------------------------------------ER 366
           TGLLAARERV                                                ER
Sbjct: 301 TGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALER 360

Query: 367 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 426
           DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK
Sbjct: 361 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 420

Query: 427 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 477
           TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS
Sbjct: 421 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 480

[Close]

BLAST of Cmc05g0140431 vs. NCBI nr
Match: XP_008453357.2 (PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Cucumis melo])

HSP 1 Score: 846.7 bits (2186), Expect = 1.0e-241
Identity = 460/518 (88.80%), Postives = 460/518 (88.80%), Query Frame = 0


Query: 7   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 66
           MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS
Sbjct: 1   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 60

Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 126
           MADSSGKHGRDHPL          DWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY
Sbjct: 61  MADSSGKHGRDHPL----------DWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120

Query: 127 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 186
           LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180

Query: 187 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 246
           NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240

Query: 247 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 306
           PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300

Query: 307 TGLLAARERV------------------------------------------------ER 366
           TGLLAARERV                                                ER
Sbjct: 301 TGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALER 360

Query: 367 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 426
           DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK
Sbjct: 361 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 420

Query: 427 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 477
           TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS
Sbjct: 421 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 480

[Close]

BLAST of Cmc05g0140431 vs. NCBI nr
Match: TYJ96462.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 728.8 bits (1880), Expect = 3.0e-206
Identity = 396/444 (89.19%), Postives = 396/444 (89.19%), Query Frame = 0


Query: 81  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 140
           DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF
Sbjct: 29  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 88

Query: 141 QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE 200
           QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE
Sbjct: 89  QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE 148

Query: 201 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 260
           AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR
Sbjct: 149 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 208

Query: 261 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV---- 320
           AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV    
Sbjct: 209 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERVEENG 268

Query: 321 --------------------------------------------ERDHLPRKPELKASVQ 380
                                                       ERDHLPRKPELKASVQ
Sbjct: 269 GENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALERDHLPRKPELKASVQ 328

Query: 381 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 440
           ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA
Sbjct: 329 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 388

Query: 441 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 477
           LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF
Sbjct: 389 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 448

[Close]

BLAST of Cmc05g0140431 vs. NCBI nr
Match: KAA0048074.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 721.8 bits (1862), Expect = 3.7e-204
Identity = 395/444 (88.96%), Postives = 395/444 (88.96%), Query Frame = 0


Query: 81  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 140
           DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF
Sbjct: 29  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 88

Query: 141 QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE 200
           QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRR QE
Sbjct: 89  QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRR-QE 148

Query: 201 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 260
           AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR
Sbjct: 149 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 208

Query: 261 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV---- 320
           AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV    
Sbjct: 209 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERVEENG 268

Query: 321 --------------------------------------------ERDHLPRKPELKASVQ 380
                                                       ERDHLPRKPELKASVQ
Sbjct: 269 GENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALERDHLPRKPELKASVQ 328

Query: 381 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 440
           ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA
Sbjct: 329 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 388

Query: 441 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 477
           LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF
Sbjct: 389 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 448

[Close]

BLAST of Cmc05g0140431 vs. ExPASy Swiss-Prot
Match: Q5ZKQ3 (RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-27
Identity = 118/407 (28.99%), Postives = 200/407 (49.14%), Query Frame = 0


Query: 97  KGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQG 156
           K + KK++ QA+  E  ++++ E+A  ++  +         R  + EQ    A +EK+ G
Sbjct: 238 KNELKKIE-QALSSESSEQKEFEEAVRSELTENE------RRCIEEEQLKQKAVTEKDLG 297

Query: 157 NEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRY 216
           N YFK+ K++ AI+CY+R IA   T A+  ANRAMAYLKI++++EAE+DCT+AL LD  Y
Sbjct: 298 NGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYLKIQKYEEAENDCTQALLLDASY 357

Query: 217 IKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLRAFVGK---------- 276
            KA++RR  AR  LGK KEA++D E   +LEP N++   +   +R  + +          
Sbjct: 358 SKAFARRGAARVALGKLKEAMQDFEAVLKLEPGNKQAINELTKIRNELAEKEQSCHEEYP 417

Query: 277 AILEKAS-------------GASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTS------R 336
           A+L K S                 + P  +  +++ D D    D    SSSTS       
Sbjct: 418 AVLIKESEIKNIVKLTHNPLNLKSTKPLRRIAVEEVDDDVLNSDF---SSSTSLVNNWKN 477

Query: 337 TGLLAARERVERD------HLPR-------------KPELKASVQELAS----------Q 396
           +  +   E +++D       +P+              P+L A  + ++S          +
Sbjct: 478 SVNIETTENLDQDDQLTSMDIPKAKQLKIEEITDVSSPQLPAGAKGVSSVLHPSMNKQIE 537

Query: 397 AASRSMVEAAKNIIA-PTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAP 442
             +++   +A  + A P  ++Q E  +R   D        LK I P+  P++F+ +L   
Sbjct: 538 RENKASFRSASPVPAIPANSFQLESDFRKLKDCPEKMYLYLKQIEPSIYPKLFQKSLDPD 597

[Close]

BLAST of Cmc05g0140431 vs. ExPASy Swiss-Prot
Match: Q9D706 (RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.7e-27
Identity = 106/354 (29.94%), Postives = 165/354 (46.61%), Query Frame = 0


Query: 143 EQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEA 202
           +Q    A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLKI+R++EA
Sbjct: 278 QQGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEA 337

Query: 203 EDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQE---------- 262
           E DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP N++          
Sbjct: 338 ERDCTQAIVLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAATELSRIKK 397

Query: 263 --IKKQHAD---LRAFVGKAILEKASGASRSSPKDKK---------MLKKSDSDAKIQDI 322
             I+K H D   L +     +++      R SPK  K         +++  D+      +
Sbjct: 398 ELIEKGHWDDVFLDSTQRHHVVKAVDNPPRGSPKALKKVFIEETGNLIETVDAPDSSATV 457

Query: 323 PPVSSSTSRTGLLAARERVERDHLP------------------RKPELKASVQELASQAA 382
           P    +T+  G    +   E   LP                    P+ +  V++ A Q  
Sbjct: 458 PESDRATAAVGTGTKKNPSEGVSLPAGDRPRAKVLKIEAVSDTSAPQAQVGVKQDARQPG 517

Query: 383 SR----------SMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIF 442
           S             + AA     P  ++Q E  +R       +    +K I P+  P++F
Sbjct: 518 SEKASVRAEQMPGQLAAAGLPPVPANSFQLESDFRQLRSSPEMLYQYVKNIEPSLYPKLF 577

[Close]

BLAST of Cmc05g0140431 vs. ExPASy Swiss-Prot
Match: Q68FQ7 (RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.2e-26
Identity = 103/354 (29.10%), Postives = 171/354 (48.31%), Query Frame = 0


Query: 149 AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTE 208
           A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLK+++++EAE DCT+
Sbjct: 282 AIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQ 341

Query: 209 ALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQE-------IKKQHAD-- 268
           A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP N++       IKK+  +  
Sbjct: 342 AILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIKKELIEKG 401

Query: 269 ------LRAFVGKAILEKASGASRSSPKDKK---------MLKKSDSDAKIQDIP----- 328
                 L +     +++      R SPK  K         +++  D+      +P     
Sbjct: 402 RWDDVFLDSTQRHNVVKPVDSPHRGSPKALKKVFIEETGNLIESVDAPESSATVPESDRA 461

Query: 329 PVSSSTSRTGLLAARERVERDHLPR-----------------KPELKASVQELASQAASR 388
            V+  T R    +  + V     PR                 + ++K  V++  S+  S 
Sbjct: 462 AVAVDTGRKKDFSQGDSVSSGETPRAKVLKIEAVGDSSAPQAQVDVKQGVRQSVSEKTSV 521

Query: 389 SMVEAAKNIIA------PTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTA 448
            + +    + A      P  ++Q E  +R       +    +K I P+  P++F+  L  
Sbjct: 522 RVAQTPGQLAAVVLPPVPANSFQLESDFRQLRSSPEMLYQYVKKIEPSLYPKLFQKNLDP 581

[Close]

BLAST of Cmc05g0140431 vs. ExPASy Swiss-Prot
Match: Q9H6T3 (RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 5.5e-25
Identity = 118/409 (28.85%), Postives = 197/409 (48.17%), Query Frame = 0


Query: 102 KLKPQAIGKEKEDRRQTEKASAAD--YLKQYDAVNRLS----RNFQTEQSFVDAASEKEQ 161
           +L+P       E R+ ++  ++ +  Y K+ D V + +    +  + +Q+   A SEK++
Sbjct: 229 ELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDR 288

Query: 162 GNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDR 221
           GN +FK+ K++ AI+CY+R IA     A+  ANRAMAYLKI++++EAE DCT+A+ LD  
Sbjct: 289 GNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGS 348

Query: 222 YIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQE------------IKKQHAD---- 281
           Y KA++RR TAR  LGK  EA +D E    LEP N++            I+K H D    
Sbjct: 349 YSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKKELIEKGHWDDVFL 408

Query: 282 ---LRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIP-------PVSSSTSRTG 341
               R  V K I +       + P  K +++++ +  +  D+P       P ++  +   
Sbjct: 409 DSTQRQNVVKPI-DNPPHPGSTKPLKKVIIEETGNLIQTIDVPDSTTAAAPENNPINLAN 468

Query: 342 LLAA-----RERVERDHL------PRKPELK-------------ASVQELASQAASRSM- 401
           ++AA     ++   +D L      PR   LK             AS+++   Q+ S  M 
Sbjct: 469 VIAATGTTSKKNSSQDDLFPTSDTPRAKVLKIEEVSDTSSLQPQASLKQDVCQSYSEKMP 528

Query: 402 -------VEAAKNIIAPTTA--YQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALT 442
                   + A  ++ P  A  +Q E  +R       +    LK I P+  P++F+  L 
Sbjct: 529 IEIEQKPAQFATTVLPPIPANSFQLESDFRQLKSSPDMLYQYLKQIEPSLYPKLFQKNLD 588

[Close]

BLAST of Cmc05g0140431 vs. ExPASy Swiss-Prot
Match: Q6NU95 (RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-21
Identity = 100/365 (27.40%), Postives = 165/365 (45.21%), Query Frame = 0


Query: 138 RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIR 197
           +  + +Q    A  +K+ GN YFK+ K++ AI+CYS+ +    T A+  ANRAMAYLKI+
Sbjct: 273 KQIEIQQRKQQAIMQKDLGNAYFKEGKYEIAIECYSQGMEADNTNALLPANRAMAYLKIQ 332

Query: 198 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQ----EI 257
           +++EAE DCT A++LD  Y KA++RR TA   LGK KEA ED E   +L+P N+    E+
Sbjct: 333 KYKEAEADCTLAISLDASYCKAFARRGTASIMLGKQKEAKEDFEMVLKLDPGNKQAVLEL 392

Query: 258 KKQHADLRAF------------------------------VGKAILEKASGASR--SSPK 317
            K   +LR+                               + + ++E+  G +   ++  
Sbjct: 393 AKISQELRSIEKDRNGNKDSNQRKLINTVEKLPHLRSTKPLRRMVIEEVGGPAEIFNTSL 452

Query: 318 DKKMLKKSDS----------------------DAKIQDIPPVSSSTSRTGLLAARERVER 377
            +   +K+DS                      D     IP +   +   G  +       
Sbjct: 453 KETNHRKADSVDLTAETNTQDLNQEQNICNSPDVPSPKIPKIEEISDTPG--SCEPTTGE 512

Query: 378 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 437
           D+L  +P      + +++ + S ++   A     PT ++Q E  +R    +  L    LK
Sbjct: 513 DYLTSRPSPPKIEKVVSTFSESLNIGIPA----VPTNSFQLESDFRRLKGNPDLLYVYLK 572

Query: 438 TISPAKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISFLENLVKVPRFSILMMCL 442
            I P    ++FK AL   +  DI+  +   F   + P L    L+ L ++ RF + +M L
Sbjct: 573 QIEPTLYGKLFKKALDPDLFSDILTILREQFINKDSPDLIFEILQRLSELKRFDMAVMFL 631

[Close]

BLAST of Cmc05g0140431 vs. ExPASy TrEMBL
Match: A0A1S3BW25 (RNA polymerase II-associated protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.4e-257
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 0


Query: 7   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 66
           MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS
Sbjct: 1   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 60

Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 126
           MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY
Sbjct: 61  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120

Query: 127 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 186
           LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180

Query: 187 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 246
           NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240

Query: 247 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 306
           PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300

Query: 307 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 366
           TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF
Sbjct: 301 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 360

Query: 367 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 426
           SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV
Sbjct: 361 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 420

Query: 427 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 477
           PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 421 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 470

[Close]

BLAST of Cmc05g0140431 vs. ExPASy TrEMBL
Match: A0A1S3BWU0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 9.8e-251
Identity = 470/518 (90.73%), Postives = 470/518 (90.73%), Query Frame = 0


Query: 7   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 66
           MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS
Sbjct: 1   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 60

Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 126
           MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY
Sbjct: 61  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120

Query: 127 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 186
           LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180

Query: 187 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 246
           NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240

Query: 247 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 306
           PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300

Query: 307 TGLLAARERV------------------------------------------------ER 366
           TGLLAARERV                                                ER
Sbjct: 301 TGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALER 360

Query: 367 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 426
           DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK
Sbjct: 361 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 420

Query: 427 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 477
           TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS
Sbjct: 421 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 480

[Close]

BLAST of Cmc05g0140431 vs. ExPASy TrEMBL
Match: A0A1S3BVH1 (RNA polymerase II-associated protein 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 4.9e-242
Identity = 460/518 (88.80%), Postives = 460/518 (88.80%), Query Frame = 0


Query: 7   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 66
           MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS
Sbjct: 1   MLFFALAQSVRISTDFESSAVTPTGEHLWTLPEALSKTICYYFPFSLYSSLLFLSFFCSS 60

Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 126
           MADSSGKHGRDHPL          DWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY
Sbjct: 61  MADSSGKHGRDHPL----------DWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120

Query: 127 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 186
           LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180

Query: 187 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 246
           NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240

Query: 247 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 306
           PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300

Query: 307 TGLLAARERV------------------------------------------------ER 366
           TGLLAARERV                                                ER
Sbjct: 301 TGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALER 360

Query: 367 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 426
           DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK
Sbjct: 361 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 420

Query: 427 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 477
           TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS
Sbjct: 421 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 480

[Close]

BLAST of Cmc05g0140431 vs. ExPASy TrEMBL
Match: A0A5D3B9C0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001060 PE=4 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.5e-206
Identity = 396/444 (89.19%), Postives = 396/444 (89.19%), Query Frame = 0


Query: 81  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 140
           DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF
Sbjct: 29  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 88

Query: 141 QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE 200
           QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE
Sbjct: 89  QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE 148

Query: 201 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 260
           AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR
Sbjct: 149 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 208

Query: 261 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV---- 320
           AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV    
Sbjct: 209 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERVEENG 268

Query: 321 --------------------------------------------ERDHLPRKPELKASVQ 380
                                                       ERDHLPRKPELKASVQ
Sbjct: 269 GENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALERDHLPRKPELKASVQ 328

Query: 381 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 440
           ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA
Sbjct: 329 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 388

Query: 441 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 477
           LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF
Sbjct: 389 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 448

[Close]

BLAST of Cmc05g0140431 vs. ExPASy TrEMBL
Match: A0A5A7TYG9 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001440 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.8e-204
Identity = 395/444 (88.96%), Postives = 395/444 (88.96%), Query Frame = 0


Query: 81  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 140
           DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF
Sbjct: 29  DFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRLSRNF 88

Query: 141 QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQE 200
           QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRR QE
Sbjct: 89  QTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRR-QE 148

Query: 201 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 260
           AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR
Sbjct: 149 AEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLR 208

Query: 261 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV---- 320
           AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV    
Sbjct: 209 AFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERVEENG 268

Query: 321 --------------------------------------------ERDHLPRKPELKASVQ 380
                                                       ERDHLPRKPELKASVQ
Sbjct: 269 GENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALERDHLPRKPELKASVQ 328

Query: 381 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 440
           ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA
Sbjct: 329 ELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNA 388

Query: 441 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 477
           LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF
Sbjct: 389 LTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIWDEVF 448

[Close]

BLAST of Cmc05g0140431 vs. TAIR 10
Match: AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 426.0 bits (1094), Expect = 3.9e-119
Identity = 245/479 (51.15%), Postives = 315/479 (65.76%), Query Frame = 0


Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAA-- 126
           MA S  KHGRD   DFQGF NDLQDWE+S K KDKK+K Q              + +   
Sbjct: 1   MARSPSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKY 60

Query: 127 DYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVA 186
           D+ K+Y ++  LS +   E S +D++SEKEQGNE+FKQKKF EAIDCYSRSIALSP AV 
Sbjct: 61  DFAKKYRSIRDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120

Query: 187 FANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 246
           +ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180

Query: 247 LEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQD-------- 306
           LEP +QE+KKQ+AD+++ + K I+EKA+GA +S+ ++  +LK S  D KIQ         
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQE--LLKTSGLDKKIQKPKTEMTSK 240

Query: 307 ------------IPPVSSSTSRTG-------------------------------LLAAR 366
                       + PV  S   +G                               +    
Sbjct: 241 PVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTPGS 300

Query: 367 ERVERDHLP----------------RKPELKASVQELASQAASRSMVEAAKNIIAPTTAY 426
           +  E++  P                ++ ELK SVQELA+ AAS +M EA+KNI  P +AY
Sbjct: 301 QSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIKTPKSAY 360

Query: 427 QFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAI 477
           +FE SWR FS D AL++ LLK  +P+ LPQIFKNALT+P+L+DI+KCVA+FFTE+  LA+
Sbjct: 361 EFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVLVDIIKCVASFFTEDMDLAV 420

[Close]

BLAST of Cmc05g0140431 vs. TAIR 10
Match: AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 420.2 bits (1079), Expect = 2.2e-117
Identity = 246/499 (49.30%), Postives = 317/499 (63.53%), Query Frame = 0


Query: 67  MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAA-- 126
           MA S  KHGRD   DFQGF NDLQDWE+S K KDKK+K Q              + +   
Sbjct: 1   MARSPSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKY 60

Query: 127 DYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVA 186
           D+ K+Y ++  LS +   E S +D++SEKEQGNE+FKQKKF EAIDCYSRSIALSP AV 
Sbjct: 61  DFAKKYRSIRDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120

Query: 187 FANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 246
           +ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180

Query: 247 LEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSST 306
           LEP +QE+KKQ+AD+++ + K I+EKA+GA +S+ ++  +LK S  D KIQ   P +  T
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQE--LLKTSGLDKKIQ--KPKTEMT 240

Query: 307 SRTGLLAAR---------------------ERVERDH----------------------- 366
           S+   L A+                     E ++ +H                       
Sbjct: 241 SKPVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEHRWNFRELISLYLSCYLQEKSKEG 300

Query: 367 -------------------------------------------LPRKPELKASVQELASQ 426
                                                      + ++ ELK SVQELA+ 
Sbjct: 301 SMKIPAITEILDSKKVTPGSQSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAH 360

Query: 427 AASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAPI 477
           AAS +M EA+KNI  P +AY+FE SWR FS D AL++ LLK  +P+ LPQIFKNALT+P+
Sbjct: 361 AASLAMTEASKNIKTPKSAYEFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPV 420

[Close]

BLAST of Cmc05g0140431 vs. TAIR 10
Match: AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III )

HSP 1 Score: 93.6 bits (231), Expect = 4.6e-19
Identity = 58/140 (41.43%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 127 LKQYDAV---NRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSP-TA 186
           L++Y ++    + S+   T++   + A  KE+GN+ FK+K +++AI  YS +I LS   A
Sbjct: 451 LQEYSSIVTDPKSSKKAITKEESAEIA--KEKGNQAFKEKLWQKAIGLYSEAIKLSDNNA 510

Query: 187 VAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFA 246
             ++NRA AYL++  F +AE+DCT+A+ LD + +KAY RR TAR+ LG  K A+ED  +A
Sbjct: 511 TYYSNRAAAYLELGGFLQAEEDCTKAITLDKKNVKAYLRRGTAREMLGDCKGAIEDFRYA 570

Query: 247 QRLEPNNQEIKKQHADLRAF 263
             LEPNN+        LR F
Sbjct: 571 LVLEPNNKRASLSAERLRKF 588

[Close]

BLAST of Cmc05g0140431 vs. TAIR 10
Match: AT2G42810.1 (protein phosphatase 5.2 )

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-15
Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 141 QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRF 200
           + E S V  A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K+  +
Sbjct: 4   KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63

Query: 201 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAD 260
             A  D ++A+ +D RY K Y RR  A   +GK K+AL+D +  +RL PN+ +  ++  +
Sbjct: 64  GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123

Query: 261 LRAFVGKAILEKA 272
               V K   E+A
Sbjct: 124 CEKAVMKLKFEEA 136

[Close]

BLAST of Cmc05g0140431 vs. TAIR 10
Match: AT2G42810.2 (protein phosphatase 5.2 )

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-15
Identity = 61/173 (35.26%), Postives = 93/173 (53.76%), Query Frame = 0


Query: 141 QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRF 200
           + E S V  A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K+  +
Sbjct: 4   KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63

Query: 201 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAD 260
             A  D ++A+ +D RY K Y RR  A   +GK K+AL+D +  +RL PN+ +  ++  +
Sbjct: 64  GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123

Query: 261 LRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLA 312
               V K   E+A     S   +++ + +S     I + P  SS  ++T L A
Sbjct: 124 CEKAVMKLKFEEAISVPVS---ERRSVAESIDFHTIGNKPRSSSMPTKTALAA 173

The following BLAST results are available for this feature:

BLAST of Cmc05g0140431 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453365.2	2.9e-257	100.00	PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Cucumis melo]	[more]
XP_008453348.2	2.0e-250	90.73	PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo]	[more]
XP_008453357.2	1.0e-241	88.80	PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Cucumis melo]	[more]
TYJ96462.1	3.0e-206	89.19	RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0048074.1	3.7e-204	88.96	RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0140431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZKQ3	1.2e-27	28.99	RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV...	[more]
Q9D706	7.7e-27	29.94	RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV...	[more]
Q68FQ7	2.2e-26	29.10	RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE...	[more]
Q9H6T3	5.5e-25	28.85	RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=...	[more]
Q6NU95	1.7e-21	27.40	RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 S...	[more]

BLAST of Cmc05g0140431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BW25	1.4e-257	100.00	RNA polymerase II-associated protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3BWU0	9.8e-251	90.73	RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3BVH1	4.9e-242	88.80	RNA polymerase II-associated protein 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3B9C0	1.5e-206	89.19	RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A5A7TYG9	1.8e-204	88.96	RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Cmc05g0140431 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56440.1	3.9e-119	51.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G56440.2	2.2e-117	49.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G17970.1	4.6e-19	41.43	translocon at the outer membrane of chloroplasts 64-III	[more]
AT2G42810.1	4.1e-15	39.10	protein phosphatase 5.2	[more]
AT2G42810.2	4.1e-15	35.26	protein phosphatase 5.2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 222..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..293
None	No IPR available	PANTHER	PTHR47329	OS05G0129900 PROTEIN	coord: 67..476
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 216..249 e-value: 0.064 score: 22.4 coord: 149..182 e-value: 8.9E-5 score: 31.9 coord: 183..215 e-value: 0.082 score: 22.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 149..182 score: 10.2959
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 216..249 score: 8.0539
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 133..247 e-value: 3.1E-35 score: 122.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 150..267
IPR025986	RNA-polymerase II-associated protein 3-like, C-terminal domain	PFAM	PF13877	RPAP3_C	coord: 352..441 e-value: 8.1E-26 score: 90.3
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 154..181 e-value: 2.5E-7 score: 30.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0140431.1	Cmc05g0140431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding