Cmc05g0138821 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0138821
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr05: 23382619 .. 23382906 (+)
RNA-Seq Expression	Cmc05g0138821
Synteny	Cmc05g0138821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCAGAGTTGTTCTCTTTACAGAAGAATCAGACATGGTCGTTGGTTCCAAAGCCTCCTAATCAGAAACTCATTCAATCAAGGTGGATTTACAAAATCAAGCCAGGTACAGGAGGTGACAATAAGCCTAGATATAAGGCTAGGTTGATATCCAAGGGCTACACTCAGAAGGAGGAAGTTCACTTTCATGAGATTTTCTCTCCGGTGGTGAGGCATTCGTCCATTAGATTAATCTTATCTATTACTGTTCACTTTCCGACGACTCTTGCAACGTTGAGTTTCTGA

mRNA sequence

ATGAAAGCAGAGTTGTTCTCTTTACAGAAGAATCAGACATGGTCGTTGGTTCCAAAGCCTCCTAATCAGAAACTCATTCAATCAAGGTGGATTTACAAAATCAAGCCAGGTACAGGAGGTGACAATAAGCCTAGATATAAGGCTAGGTTGATATCCAAGGGCTACACTCAGAAGGAGGAAGTTCACTTTCATGAGATTTTCTCTCCGGTGGTGAGGCATTCGTCCATTAGATTAATCTTATCTATTACTGTTCACTTTCCGACGACTCTTGCAACGTTGAGTTTCTGA

Coding sequence (CDS)

ATGAAAGCAGAGTTGTTCTCTTTACAGAAGAATCAGACATGGTCGTTGGTTCCAAAGCCTCCTAATCAGAAACTCATTCAATCAAGGTGGATTTACAAAATCAAGCCAGGTACAGGAGGTGACAATAAGCCTAGATATAAGGCTAGGTTGATATCCAAGGGCTACACTCAGAAGGAGGAAGTTCACTTTCATGAGATTTTCTCTCCGGTGGTGAGGCATTCGTCCATTAGATTAATCTTATCTATTACTGTTCACTTTCCGACGACTCTTGCAACGTTGAGTTTCTGA

Protein sequence

MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEEVHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF

Homology

[Close]

BLAST of Cmc05g0138821 vs. NCBI nr
Match: KAA0067294.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK10907.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 9.2e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE
Sbjct: 328 MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 387

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF 96
           VHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF
Sbjct: 388 VHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF 422

[Close]

BLAST of Cmc05g0138821 vs. NCBI nr
Match: KAA0067243.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] >TYK10853.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+AELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 682 MEAELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 741

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 742 VDFHEIFSPVVRHSSIRLILSIVVHF 767

[Close]

BLAST of Cmc05g0138821 vs. NCBI nr
Match: TYK13826.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 5.6e-35
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ ELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 672 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 731

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 732 VDFHEIFSPVVRHSSIRLILSIAVHF 757

[Close]

BLAST of Cmc05g0138821 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 5.6e-35
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ ELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHF 927

[Close]

BLAST of Cmc05g0138821 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 5.6e-35
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ ELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHF 927

[Close]

BLAST of Cmc05g0138821 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 34/86 (39.53%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           +  EL + + N TW++  +P N+ ++ SRW++ +K    G N  RYKARL+++G+TQK +
Sbjct: 910 INTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELG-NPIRYKARLVARGFTQKYQ 969

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           + + E F+PV R SS R ILS+ + +
Sbjct: 970 IDYEETFAPVARISSFRFILSLVIQY 994

[Close]

BLAST of Cmc05g0138821 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-13
Identity = 37/82 (45.12%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ EL +L +N+TW LVP P NQ ++  +W++K K  + G    R KARL++KG+ Q+E 
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG-TLDRLKARLVAKGFHQEEG 103

Query: 61  VHFHEIFSPVVRHSSIRLILSI 83
           ++F E +SPVVR ++IR IL++
Sbjct: 104 IYFVETYSPVVRTATIRTILNV 124

[Close]

BLAST of Cmc05g0138821 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.8e-13
Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNK-PRYKARLISKGYTQKE 60
           M+ E+ SLQKN T+ LV  P  ++ ++ +W++K+K    GD K  RYKARL+ KG+ QK+
Sbjct: 830 MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK--KDGDCKLVRYKARLVVKGFEQKK 889

Query: 61  EVHFHEIFSPVVRHSSIRLILSI 83
            + F EIFSPVV+ +SIR ILS+
Sbjct: 890 GIDFDEIFSPVVKMTSIRTILSL 910

[Close]

BLAST of Cmc05g0138821 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-11
Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 1    MKAELFSLQKNQTWSLVPKPPNQ-KLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKE 60
            M +E+ +   N TW LVP PP+   ++  RWI+  K  + G +  RYKARL++KGY Q+ 
Sbjct: 972  MGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG-SLNRYKARLVAKGYNQRP 1031

Query: 61   EVHFHEIFSPVVRHSSIRLILSITV 85
             + + E FSPV++ +SIR++L + V
Sbjct: 1032 GLDYAETFSPVIKSTSIRIVLGVAV 1055

[Close]

BLAST of Cmc05g0138821 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-10
Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 1    MKAELFSLQKNQTWSLV-PKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKE 60
            M +E+ +   N TW LV P PP+  ++  RWI+  K  + G +  RYKARL++KGY Q+ 
Sbjct: 955  MGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDG-SLNRYKARLVAKGYNQRP 1014

Query: 61   EVHFHEIFSPVVRHSSIRLILSITV 85
             + + E FSPV++ +SIR++L + V
Sbjct: 1015 GLDYAETFSPVIKSTSIRIVLGVAV 1038

[Close]

BLAST of Cmc05g0138821 vs. ExPASy TrEMBL
Match: A0A5A7VIW7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00850 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.5e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE
Sbjct: 328 MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 387

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF 96
           VHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF
Sbjct: 388 VHFHEIFSPVVRHSSIRLILSITVHFPTTLATLSF 422

[Close]

BLAST of Cmc05g0138821 vs. ExPASy TrEMBL
Match: A0A5A7VGM4 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00240 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-36
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+AELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 682 MEAELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 741

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 742 VDFHEIFSPVVRHSSIRLILSIVVHF 767

[Close]

BLAST of Cmc05g0138821 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ ELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHF 927

[Close]

BLAST of Cmc05g0138821 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ ELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 672 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 731

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 732 VDFHEIFSPVVRHSSIRLILSIAVHF 757

[Close]

BLAST of Cmc05g0138821 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ ELFSL KNQTWSLVPKPPNQKLIQS+WIYKIKPGTGG++KPRYKARL++KGYTQKE 
Sbjct: 842 MEEELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKPGTGGNSKPRYKARLVAKGYTQKEG 901

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHF 87
           V FHEIFSPVVRHSSIRLILSI VHF
Sbjct: 902 VDFHEIFSPVVRHSSIRLILSIAVHF 927

[Close]

BLAST of Cmc05g0138821 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 79.0 bits (193), Expect = 2.4e-15
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M  E+ +++   TW +   PPN+K I  +W+YKIK  + G  + RYKARL++KGYTQ+E 
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEG 161

Query: 61  VHFHEIFSPVVRHSSIRLILSITVHFPTTLATL 94
           + F E FSPV + +S++LIL+I+  +  TL  L
Sbjct: 162 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQL 193

[Close]

BLAST of Cmc05g0138821 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14
Identity = 37/82 (45.12%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 1   MKAELFSLQKNQTWSLVPKPPNQKLIQSRWIYKIKPGTGGDNKPRYKARLISKGYTQKEE 60
           M+ EL +L +N+TW LVP P NQ ++  +W++K K  + G    R KARL++KG+ Q+E 
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG-TLDRLKARLVAKGFHQEEG 103

Query: 61  VHFHEIFSPVVRHSSIRLILSI 83
           ++F E +SPVVR ++IR IL++
Sbjct: 104 IYFVETYSPVVRTATIRTILNV 124

The following BLAST results are available for this feature:

BLAST of Cmc05g0138821 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067294.1	9.2e-46	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0067243.1	1.5e-35	88.37	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
TYK13826.1	5.6e-35	87.21	putative polyprotein [Cucumis melo var. makuwa]	[more]
TYK25306.1	5.6e-35	87.21	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050719.1	5.6e-35	87.21	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0138821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04146	2.1e-13	39.53	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	2.1e-13	45.12	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	2.8e-13	49.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	5.8e-11	41.18	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.3e-10	41.18	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc05g0138821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIW7	4.5e-46	100.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VGM4	7.1e-36	88.37	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5D3DNU1	2.7e-35	87.21	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3CTV2	2.7e-35	87.21	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488...	[more]
A0A5A7UB25	2.7e-35	87.21	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Cmc05g0138821 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.4e-15	44.09	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.5e-14	45.12	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 11..85 e-value: 9.5E-19 score: 67.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0138821.1	Cmc05g0138821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0050896	response to stimulus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding