Cmc05g0138461 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0138461
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 22755541 .. 22756458 (-)
RNA-Seq Expression	Cmc05g0138461
Synteny	Cmc05g0138461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCAGGCAAGCTGAAAGAACTAAAGGTCCAGTTGCAGAAGTTATTGGACAAGGGCTTCATACAACCTAGCGTGTCACCTTGGGGAGCGTCTGTACTATTGGTGAAGAAGAAGGATGGATCGATGCGTCTTTGCATTGATTACAAAGAGCTAAATAAGGTGACAGTCAAGAACCGCTATCCTTTGCCTAGGATTGACAACTTGTTTAATCAGCTGCAAGGAGCCACTGTTTTCTCTAAGATCGATTTACATTCAGGCTATCACTGGCTGAGGATTAGAGACAGTGACATCCCTAAGACTGCTTTTCATTCCAGATATGGACATTACGAGTTCATTGTAATGTCTTTTGGCCTAACAAATTCTCCTGCTGTATTTATAGATCTGATGTATAGTGTGTTTAAGGACTTCTTGGACACTTTCGTTATAGTTTTTATTGATGACATCTTGGTTTACTCCAAGACAGAGGCTGAGCATGAGAAGCATTTGCATCAGGTTTTGGAGACTCTTCGAGCCAATAAGCTATATGCCAAGTTTTCTAAGTGAGAGTTTTGGCTTAAGAAGGTGTCCTTTCTTGGCCATGTAGTATCCAGTGAGGGAGTCTCTGTTGACCCAGCAAAGATTGAAGCTGTTACCAGTTGGCCTCGACCGTCTACAGTCAGCGAGGTTCGTAGTTTTCTGGGTCTAGCAGATTATTACCGCAGGTTCGTGGAAGACTTCTCTCATATAACCAGTCCCTTGACTCAGTTGACCAGAAAAGGGACTCCCTTTGTTTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGAAGAAGCTTGTGACTGCGCCAGTTCTTACAGTGCCAGATGGATCTGGAAGTTTTTTTATCTACAGTGACGCCTCAAAAAAAGGACTGGGTTGCATTTTGATGTAG

mRNA sequence

ATGGCCCCAGGCAAGCTGAAAGAACTAAAGGTCCAGTTGCAGAAGTTATTGGACAAGGGCTTCATACAACCTAGCGTGTCACCTTGGGGAGCGTCTGTACTATTGGTGAAGAAGAAGGATGGATCGATGCGTCTTTGCATTGATTACAAAGAGCTAAATAAGGTGACAGTCAAGAACCGCTATCCTTTGCCTAGGATTGACAACTTGTTTAATCAGCTGCAAGGAGCCACTGTTTTCTCTAAGATCGATTTACATTCAGGCTATCACTGGCTGAGGATTAGAGACAGTGACATCCCTAAGACTGCTTTTCATTCCAGATATGGACATTACGAGTTCATTGTAATGTCTTTTGGCCTAACAAATTCTCCTGCTGTATTTATAGATCTGATGTATAGTGTGTTTAAGGACTTCTTGGACACTTTCGTTATAGTTTTTATTGATGACATCTTGGTTTACTCCAAGACAGAGGCTGAGCATGAGAAGCATTTGCATCAGGTGTCCTTTCTTGGCCATGTAGTATCCAGTGAGGGAGTCTCTGTTGACCCAGCAAAGATTGAAGCTGTTACCAGTTGGCCTCGACCGTCTACAGTCAGCGAGGTTCGTAGTTTTCTGGGTCTAGCAGATTATTACCGCAGGTTCGTGGAAGACTTCTCTCATATAACCAGTCCCTTGACTCAGTTGACCAGAAAAGGGACTCCCTTTGTTTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGAAGAAGCTTGTGACTGCGCCAGTTCTTACAGTGCCAGATGGATCTGGAAGTTTTTTTATCTACAGTGACGCCTCAAAAAAAGGACTGGGTTGCATTTTGATGTAG

Coding sequence (CDS)

ATGGCCCCAGGCAAGCTGAAAGAACTAAAGGTCCAGTTGCAGAAGTTATTGGACAAGGGCTTCATACAACCTAGCGTGTCACCTTGGGGAGCGTCTGTACTATTGGTGAAGAAGAAGGATGGATCGATGCGTCTTTGCATTGATTACAAAGAGCTAAATAAGGTGACAGTCAAGAACCGCTATCCTTTGCCTAGGATTGACAACTTGTTTAATCAGCTGCAAGGAGCCACTGTTTTCTCTAAGATCGATTTACATTCAGGCTATCACTGGCTGAGGATTAGAGACAGTGACATCCCTAAGACTGCTTTTCATTCCAGATATGGACATTACGAGTTCATTGTAATGTCTTTTGGCCTAACAAATTCTCCTGCTGTATTTATAGATCTGATGTATAGTGTGTTTAAGGACTTCTTGGACACTTTCGTTATAGTTTTTATTGATGACATCTTGGTTTACTCCAAGACAGAGGCTGAGCATGAGAAGCATTTGCATCAGGTGTCCTTTCTTGGCCATGTAGTATCCAGTGAGGGAGTCTCTGTTGACCCAGCAAAGATTGAAGCTGTTACCAGTTGGCCTCGACCGTCTACAGTCAGCGAGGTTCGTAGTTTTCTGGGTCTAGCAGATTATTACCGCAGGTTCGTGGAAGACTTCTCTCATATAACCAGTCCCTTGACTCAGTTGACCAGAAAAGGGACTCCCTTTGTTTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGAAGAAGCTTGTGACTGCGCCAGTTCTTACAGTGCCAGATGGATCTGGAAGTTTTTTTATCTACAGTGACGCCTCAAAAAAAGGACTGGGTTGCATTTTGATGTAG

Protein sequence

MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNRYPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLTNSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQVSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGLGCILM

Homology

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BLAST of Cmc05g0138461 vs. NCBI nr
Match: KAA0046133.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.4 bits (1313), Expect = 1.0e-140
Identity = 251/282 (89.01%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQKLLDKGFI+PSVSPWGA VL  KKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 361 MAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCIDYRELNKVTVKNR 420

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRDSDIPKTAF SR+ HYEFIVMSFGLT
Sbjct: 421 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLT 480

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQVSFLGHVVSSEGVSV 180
           N+ AVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQVSFLGHVVSSEGVSV
Sbjct: 481 NALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVSFLGHVVSSEGVSV 540

Query: 181 DPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSHITSPLTQLTRKGTPFVWSPAC 240
           DPAKIE VT+WPRPSTVSE+RSFLGLA YYRRFVEDFS I SPLTQLTRKGTPFVWSPAC
Sbjct: 541 DPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAC 600

Query: 241 ESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGLGCILM 283
           ESSFQELK+KLVTAPVLTVPDGSGSF IYSDASKKGLGC+LM
Sbjct: 601 ESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 642

[Close]

BLAST of Cmc05g0138461 vs. NCBI nr
Match: KAA0058812.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 250/305 (81.97%), Postives = 270/305 (88.52%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVT+KNR
Sbjct: 486 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNR 545

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAFHSRYGHYEF+VMSFGLT
Sbjct: 546 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRYGHYEFVVMSFGLT 605

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDF+D+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 606 NAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 665

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDPAKIEAVT+WPRPSTVSE+RSFLGLA YYRRFVEDF
Sbjct: 666 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 725

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 726 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 785

[Close]

BLAST of Cmc05g0138461 vs. NCBI nr
Match: TYK05193.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138
Identity = 250/305 (81.97%), Postives = 268/305 (87.87%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 642 MAPAELKELKVQLQELLDKGFIRPSVSPWGARVLFVKKKDGSMRLCIDYRELNKVTVKNR 701

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAF SRYGHYEF+VMSFGLT
Sbjct: 702 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 761

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 762 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 821

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDP KIEAVT+WPRPSTVSE+RSFLGLA YYRRFVEDF
Sbjct: 822 KCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 881

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 882 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 941

[Close]

BLAST of Cmc05g0138461 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138
Identity = 250/305 (81.97%), Postives = 269/305 (88.20%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 606 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 665

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAF SRYGHYEF+VMSFGLT
Sbjct: 666 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 725

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 726 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFS 785

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDPAKIEAVT+WPRPSTVSE++SFLGLA YYRRFVEDF
Sbjct: 786 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDF 845

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 846 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 905

[Close]

BLAST of Cmc05g0138461 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138
Identity = 250/305 (81.97%), Postives = 268/305 (87.87%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 137 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 196

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAF SRYGHYEF+VMSFGLT
Sbjct: 197 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 256

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 257 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 316

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDPAKIEAVT+WPRPSTVSE+RSFLGLA YYRRFVEDF
Sbjct: 317 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 376

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACE SFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 377 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 436

[Close]

BLAST of Cmc05g0138461 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 2.2e-53
Identity = 111/298 (37.25%), Postives = 170/298 (57.05%), Query Frame = 0


Query: 7   KELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNRYPLPRI 66
           +E+   +QKLLD  FI PS SP  + V+LV KKDG+ RLC+DY+ LNK T+ + +PLPRI
Sbjct: 636 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67  DNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLTNSPAVF 126
           DNL +++  A +F+ +DLHSGYH + +   D  KTAF +  G YE+ VM FGL N+P+ F
Sbjct: 696 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127 IDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHL----------------------- 186
              M   F+D    FV V++DDIL++S++  EH KHL                       
Sbjct: 756 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187 HQVSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSHITSP 246
            +  FLG+ +  + ++    K  A+  +P P TV + + FLG+ +YYRRF+ + S I  P
Sbjct: 816 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247 LTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGLGCIL 282
           +       +   W+   + + ++LK  L  +PVL   +   ++ + +DASK G+G +L
Sbjct: 876 IQLFICDKSQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVL 929

[Close]

BLAST of Cmc05g0138461 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-53
Identity = 111/298 (37.25%), Postives = 169/298 (56.71%), Query Frame = 0


Query: 7   KELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNRYPLPRI 66
           +E+   +QKLLD  FI PS SP  + V+LV KKDG+ RLC+DY+ LNK T+ + +PLPRI
Sbjct: 610 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67  DNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLTNSPAVF 126
           DNL +++  A +F+ +DLHSGYH + +   D  KTAF +  G YE+ VM FGL N+P+ F
Sbjct: 670 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127 IDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHL----------------------- 186
              M   F+D    FV V++DDIL++S++  EH KHL                       
Sbjct: 730 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187 HQVSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSHITSP 246
            +  FLG+ +  + ++    K  A+  +P P TV + + FLG+ +YYRRF+ + S I  P
Sbjct: 790 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247 LTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGLGCIL 282
           +       +   W+   + +  +LK  L  +PVL   +   ++ + +DASK G+G +L
Sbjct: 850 IQLFICDKSQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVL 903

[Close]

BLAST of Cmc05g0138461 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51
Identity = 104/304 (34.21%), Postives = 180/304 (59.21%), Query Frame = 0


Query: 7   KELKVQLQKLLDKGFIQPSVSPWGASVLLV-KKKDGS----MRLCIDYKELNKVTVKNRY 66
           +E++ Q+Q +L++G I+ S SP+ + + +V KK+D S     R+ IDY++LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLTN 126
           P+P +D +  +L     F+ IDL  G+H + +    + KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 SPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHL------------------ 186
           +PA F   M  + +  L+   +V++DDI+V+S +  EH + L                  
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 -----HQVSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFS 246
                 + +FLGHV++ +G+  +P KIEA+  +P P+   E+++FLGL  YYR+F+ +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 HITSPLTQLTRKGTPF-VWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 282
            I  P+T+  +K       +P  +S+F++LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

[Close]

BLAST of Cmc05g0138461 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.7e-50
Identity = 104/313 (33.23%), Postives = 173/313 (55.27%), Query Frame = 0


Query: 8   ELKVQLQKLLDKGFIQPSVSPWGASVLLVKKK-----DGSMRLCIDYKELNKVTVKNRYP 67
           E++ Q+ +LL  G I+PS SP+ + + +V KK     +   R+ +D+K LN VT+ + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLTNS 127
           +P I+     L  A  F+ +DL SG+H + +++SDIPKTAF +  G YEF+ + FGL N+
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLH------------------ 187
           PA+F  ++  + ++ +     V+IDDI+V+S+    H K+L                   
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 -----QVSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSH 247
                QV FLG++V+++G+  DP K+ A++  P P++V E++ FLG+  YYR+F++D++ 
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 ITSPLTQLTR-----------KGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFI 282
           +  PLT LTR              P         SF +LK  L ++ +L  P  +  F +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

[Close]

BLAST of Cmc05g0138461 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-49
Identity = 101/304 (33.22%), Postives = 170/304 (55.92%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           + PGK++ +  ++ + L  G I+ S +     V+ V KK+G++R+ +DYK LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL S YH +R+R  D  K AF    G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHL----------------- 180
            +PA F   + ++  +  ++ V+ ++DDIL++SK+E+EH KH+                 
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 ------HQVSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                  QV F+G+ +S +G +     I+ V  W +P    E+R FLG  +Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 282
           S +T PL  L +K   + W+P    + + +K+ LV+ PVL   D S    + +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

[Close]

BLAST of Cmc05g0138461 vs. ExPASy TrEMBL
Match: A0A5A7TRD6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00720 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.9e-141
Identity = 251/282 (89.01%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQKLLDKGFI+PSVSPWGA VL  KKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 361 MAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCIDYRELNKVTVKNR 420

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRDSDIPKTAF SR+ HYEFIVMSFGLT
Sbjct: 421 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLT 480

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQVSFLGHVVSSEGVSV 180
           N+ AVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQVSFLGHVVSSEGVSV
Sbjct: 481 NALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVSFLGHVVSSEGVSV 540

Query: 181 DPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSHITSPLTQLTRKGTPFVWSPAC 240
           DPAKIE VT+WPRPSTVSE+RSFLGLA YYRRFVEDFS I SPLTQLTRKGTPFVWSPAC
Sbjct: 541 DPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPAC 600

Query: 241 ESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGLGCILM 283
           ESSFQELK+KLVTAPVLTVPDGSGSF IYSDASKKGLGC+LM
Sbjct: 601 ESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 642

[Close]

BLAST of Cmc05g0138461 vs. ExPASy TrEMBL
Match: A0A5A7USG7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002890 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.0e-140
Identity = 250/305 (81.97%), Postives = 270/305 (88.52%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVT+KNR
Sbjct: 486 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNR 545

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAFHSRYGHYEF+VMSFGLT
Sbjct: 546 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRYGHYEFVVMSFGLT 605

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDF+D+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 606 NAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 665

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDPAKIEAVT+WPRPSTVSE+RSFLGLA YYRRFVEDF
Sbjct: 666 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 725

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 726 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 785

[Close]

BLAST of Cmc05g0138461 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139
Identity = 250/305 (81.97%), Postives = 269/305 (88.20%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 606 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 665

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAF SRYGHYEF+VMSFGLT
Sbjct: 666 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 725

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 726 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANNLYAKFS 785

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDPAKIEAVT+WPRPSTVSE++SFLGLA YYRRFVEDF
Sbjct: 786 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYRRFVEDF 845

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 846 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 905

[Close]

BLAST of Cmc05g0138461 vs. ExPASy TrEMBL
Match: A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139
Identity = 250/305 (81.97%), Postives = 268/305 (87.87%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 642 MAPAELKELKVQLQELLDKGFIRPSVSPWGARVLFVKKKDGSMRLCIDYRELNKVTVKNR 701

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAF SRYGHYEF+VMSFGLT
Sbjct: 702 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 761

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 762 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 821

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDP KIEAVT+WPRPSTVSE+RSFLGLA YYRRFVEDF
Sbjct: 822 KCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 881

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACESSFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 882 SRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 941

[Close]

BLAST of Cmc05g0138461 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.0e-138
Identity = 250/305 (81.97%), Postives = 268/305 (87.87%), Query Frame = 0


Query: 1   MAPGKLKELKVQLQKLLDKGFIQPSVSPWGASVLLVKKKDGSMRLCIDYKELNKVTVKNR 60
           MAP +LKELKVQLQ+LLDKGFI+PSVSPWGA VL VKKKDGSMRLCIDY+ELNKVTVKNR
Sbjct: 137 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 196

Query: 61  YPLPRIDNLFNQLQGATVFSKIDLHSGYHWLRIRDSDIPKTAFHSRYGHYEFIVMSFGLT 120
           YPLPRID+LF+QLQGATVFSKIDL SGYH LRIRD DIPKTAF SRYGHYEF+VMSFGLT
Sbjct: 197 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLT 256

Query: 121 NSPAVFIDLMYSVFKDFLDTFVIVFIDDILVYSKTEAEHEKHLHQ--------------- 180
           N+PAVF+DLM  VFKDFLD+FVIVFIDDIL+YSKTEAEHE+HLHQ               
Sbjct: 257 NAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFS 316

Query: 181 --------VSFLGHVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDF 240
                   V+FLGHVVSSEGVSVDPAKIEAVT+WPRPSTVSE+RSFLGLA YYRRFVEDF
Sbjct: 317 KCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDF 376

Query: 241 SHITSPLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPDGSGSFFIYSDASKKGL 283
           S I SPLTQLTRKGTPFVWSPACE SFQELK+KLVTAPVLTVPDGSG+F IYSDASKKGL
Sbjct: 377 SRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 436

[Close]

BLAST of Cmc05g0138461 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 165 QVSFLG--HVVSSEGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLADYYRRFVEDFSHITS 224
           Q+++LG  H++S EGVS DPAK+EA+  WP P   +E+R FLGL  YYRRFV+++  I  
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 225 PLTQLTRKGTPFVWSPACESSFQELKKKLVTAPVLTVPD 262
           PLT+L +K +   W+     +F+ LK  + T PVL +PD
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc05g0138461 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046133.1	1.0e-140	89.01	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0058812.1	1.5e-139	81.97	pol protein [Cucumis melo var. makuwa]	[more]
TYK05193.1	1.6e-138	81.97	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	1.6e-138	81.97	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	2.1e-138	81.97	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0138461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	2.2e-53	37.25	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	3.7e-53	37.25	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	2.0e-51	34.21	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.7e-50	33.23	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	1.1e-49	33.22	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc05g0138461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRD6	4.9e-141	89.01	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7USG7	7.0e-140	81.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33...	[more]
A0A5A7TG62	7.8e-139	81.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5D3BZN1	7.8e-139	81.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]
A0A5A7V6R2	1.0e-138	81.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]

BLAST of Cmc05g0138461 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-21	46.46	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..190 e-value: 2.5E-21 score: 76.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..208 score: 10.495038
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 236..282 e-value: 1.6E-11 score: 44.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..186 e-value: 2.8E-67 score: 228.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..268 e-value: 5.0E-32 score: 111.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..121 e-value: 2.8E-67 score: 228.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 3..264
None	No IPR available	PANTHER	PTHR24559:SF363	SUBFAMILY NOT NAMED	coord: 3..264
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..173 e-value: 1.86524E-74 score: 223.626
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0138461.1	Cmc05g0138461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding