Cmc05g0137391 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0137391
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	CMiso1.1chr05: 20824563 .. 20824949 (+)
RNA-Seq Expression	Cmc05g0137391
Synteny	Cmc05g0137391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTTCAGATTGACTAATGCTCCAGCCACCTTCCAAGCCTTAATGAATACTGTTTTCAAACTTTACTTGATGAAGTTTGTTTTGGTGTTTTTCGATGACATATTAGTCTACAGCAAGAACGAAGATGACCATATAGTTTATTTAGGGAAAGTCCTTTCTTCCTTAAGGGAACACTCATTATATGCCAATAAGAAGAAGTGCAGCTTTGCACAACTGAAGGTTGAGTATCTCGGACAAATCATATCAGGAAAAGGAGTTGAGGTAGATCCTGAAAAGATTCGTTCTATTGCTGATTGGCCAACACCGACGAATGTTAGAGAAACCCGGGGGTTTCTTGGATTAACCGACTATATAGACGCTTTGTTAAACATTATGGTTCTATAG

mRNA sequence

ATGCCGTTCAGATTGACTAATGCTCCAGCCACCTTCCAAGCCTTAATGAATACTGTTTTCAAACTTTACTTGATGAAGTTTGTTTTGGTGTTTTTCGATGACATATTAGTCTACAGCAAGAACGAAGATGACCATATAGTTTATTTAGGGAAAGTCCTTTCTTCCTTAAGGGAACACTCATTATATGCCAATAAGAAGAAGTGCAGCTTTGCACAACTGAAGGTTGAGTATCTCGGACAAATCATATCAGGAAAAGGAGTTGAGGTAGATCCTGAAAAGATTCGTTCTATTGCTGATTGGCCAACACCGACGAATGTTAGAGAAACCCGGGGGTTTCTTGGATTAACCGACTATATAGACGCTTTGTTAAACATTATGGTTCTATAG

Coding sequence (CDS)

ATGCCGTTCAGATTGACTAATGCTCCAGCCACCTTCCAAGCCTTAATGAATACTGTTTTCAAACTTTACTTGATGAAGTTTGTTTTGGTGTTTTTCGATGACATATTAGTCTACAGCAAGAACGAAGATGACCATATAGTTTATTTAGGGAAAGTCCTTTCTTCCTTAAGGGAACACTCATTATATGCCAATAAGAAGAAGTGCAGCTTTGCACAACTGAAGGTTGAGTATCTCGGACAAATCATATCAGGAAAAGGAGTTGAGGTAGATCCTGAAAAGATTCGTTCTATTGCTGATTGGCCAACACCGACGAATGTTAGAGAAACCCGGGGGTTTCTTGGATTAACCGACTATATAGACGCTTTGTTAAACATTATGGTTCTATAG

Protein sequence

MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHSLYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDYIDALLNIMVL

Homology

[Close]

BLAST of Cmc05g0137391 vs. NCBI nr
Match: TYK27013.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 107/118 (90.68%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQALMNTVFK YL KFVLVFFDDILVYSKNEDDH+V+LGKVLSSLREHS
Sbjct: 550 MPFGLTNAPATFQALMNTVFKPYLRKFVLVFFDDILVYSKNEDDHVVHLGKVLSSLREHS 609

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           L+ANKKKCSFAQLKVEYLG IISGKGVEVDP+KIRSIADWPT TNVRETRGFLGL  Y
Sbjct: 610 LHANKKKCSFAQLKVEYLGHIISGKGVEVDPKKIRSIADWPTATNVRETRGFLGLIGY 667

[Close]

BLAST of Cmc05g0137391 vs. NCBI nr
Match: TYK01195.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMNTVFK YL KFVLVFFDDILVYSKNEDDHIV+LGKVLSSLREHS
Sbjct: 687 MPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVYSKNEDDHIVHLGKVLSSLREHS 746

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKKCSFAQLKVEYLG IISGKGVEVDPEKIRSIA WPT TNVRET+GFLGLT Y
Sbjct: 747 LYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIAAWPTTTNVRETQGFLGLTGY 804

[Close]

BLAST of Cmc05g0137391 vs. NCBI nr
Match: KAA0062661.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMNTVFK YL KFVLVFFDDILVYSKNEDDHIV+LGKVLSSLREHS
Sbjct: 653 MPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVYSKNEDDHIVHLGKVLSSLREHS 712

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKKCSFAQLKVEYLG IISGKGVEVDPEKIRSIA WPT TNVRET+GFLGLT Y
Sbjct: 713 LYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIAAWPTTTNVRETQGFLGLTGY 770

[Close]

BLAST of Cmc05g0137391 vs. NCBI nr
Match: TYK24006.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMN VFK YL KFVLVFFDDILVYSKNE+DH+V+LGKVLSSLREHS
Sbjct: 529 MPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVYSKNEEDHVVHLGKVLSSLREHS 588

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKK SFAQLKVEYL  II G GVEVDP+KIRSIADWPTPTNVRETRGFLGLT Y
Sbjct: 589 LYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIADWPTPTNVRETRGFLGLTSY 646

[Close]

BLAST of Cmc05g0137391 vs. NCBI nr
Match: KAA0061922.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMN VFK YL KFVLVFFDDILVYSKNE+DH+V+LGKVLSSLREHS
Sbjct: 529 MPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVYSKNEEDHVVHLGKVLSSLREHS 588

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKK SFAQLKVEYL  II G GVEVDP+KIRSIADWPTPTNVRETRGFLGLT Y
Sbjct: 589 LYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIADWPTPTNVRETRGFLGLTSY 646

[Close]

BLAST of Cmc05g0137391 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-21
Identity = 48/118 (40.68%), Postives = 80/118 (67.80%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           +PF L NAPA FQ +++ + + ++ K   V+ DDI+V+S++ D H   L  VL+SL + +
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           L  N +K  F   +VE+LG I++  G++ DP+K+R+I++ P PT+V+E + FLG+T Y
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSY 367

[Close]

BLAST of Cmc05g0137391 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-21
Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF L NAPATFQ  MN + +  L K  LV+ DDI+V+S + D+H+  LG V   L + +
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           L     KC F + +  +LG +++  G++ +PEKI +I  +P PT  +E + FLGLT Y
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGY 451

[Close]

BLAST of Cmc05g0137391 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF L NAPATFQ  MN + +  L K  LV+ DDI+++S +  +H+  +  V + L + +
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           L     KC F + +  +LG I++  G++ +P K+++I  +P PT  +E R FLGLT Y
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGY 450

[Close]

BLAST of Cmc05g0137391 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 44/118 (37.29%), Postives = 74/118 (62.71%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           +PF L NA + FQ  ++ V +  + K   V+ DD++++S+NE DH+ ++  VL  L + +
Sbjct: 309 LPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDAN 368

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           +  +++K  F +  VEYLG I+S  G + DPEK+++I ++P P  V + R FLGL  Y
Sbjct: 369 MRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASY 426

[Close]

BLAST of Cmc05g0137391 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-17
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MP+ ++ APA FQ  +NT+        V+ + DDIL++SK+E +H+ ++  VL  L+  +
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDYI 120
           L  N+ KC F Q +V+++G  IS KG     E I  +  W  P N +E R FLG  +Y+
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYL 652

[Close]

BLAST of Cmc05g0137391 vs. ExPASy TrEMBL
Match: A0A5D3DTQ1 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00210 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 107/118 (90.68%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQALMNTVFK YL KFVLVFFDDILVYSKNEDDH+V+LGKVLSSLREHS
Sbjct: 550 MPFGLTNAPATFQALMNTVFKPYLRKFVLVFFDDILVYSKNEDDHVVHLGKVLSSLREHS 609

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           L+ANKKKCSFAQLKVEYLG IISGKGVEVDP+KIRSIADWPT TNVRETRGFLGL  Y
Sbjct: 610 LHANKKKCSFAQLKVEYLGHIISGKGVEVDPKKIRSIADWPTATNVRETRGFLGLIGY 667

[Close]

BLAST of Cmc05g0137391 vs. ExPASy TrEMBL
Match: A0A5D3BPU7 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00410 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMNTVFK YL KFVLVFFDDILVYSKNEDDHIV+LGKVLSSLREHS
Sbjct: 687 MPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVYSKNEDDHIVHLGKVLSSLREHS 746

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKKCSFAQLKVEYLG IISGKGVEVDPEKIRSIA WPT TNVRET+GFLGLT Y
Sbjct: 747 LYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIAAWPTTTNVRETQGFLGLTGY 804

[Close]

BLAST of Cmc05g0137391 vs. ExPASy TrEMBL
Match: A0A5A7VAG8 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001800 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.9e-52
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMNTVFK YL KFVLVFFDDILVYSKNEDDHIV+LGKVLSSLREHS
Sbjct: 653 MPFGLTNAPATFQPLMNTVFKPYLRKFVLVFFDDILVYSKNEDDHIVHLGKVLSSLREHS 712

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKKCSFAQLKVEYLG IISGKGVEVDPEKIRSIA WPT TNVRET+GFLGLT Y
Sbjct: 713 LYANKKKCSFAQLKVEYLGHIISGKGVEVDPEKIRSIAAWPTTTNVRETQGFLGLTGY 770

[Close]

BLAST of Cmc05g0137391 vs. ExPASy TrEMBL
Match: A0A5D3DK67 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00980 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMN VFK YL KFVLVFFDDILVYSKNE+DH+V+LGKVLSSLREHS
Sbjct: 529 MPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVYSKNEEDHVVHLGKVLSSLREHS 588

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKK SFAQLKVEYL  II G GVEVDP+KIRSIADWPTPTNVRETRGFLGLT Y
Sbjct: 589 LYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIADWPTPTNVRETRGFLGLTSY 646

[Close]

BLAST of Cmc05g0137391 vs. ExPASy TrEMBL
Match: A0A5A7V139 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001800 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MPFRLTNAPATFQALMNTVFKLYLMKFVLVFFDDILVYSKNEDDHIVYLGKVLSSLREHS 60
           MPF LTNAPATFQ LMN VFK YL KFVLVFFDDILVYSKNE+DH+V+LGKVLSSLREHS
Sbjct: 529 MPFGLTNAPATFQTLMNAVFKPYLRKFVLVFFDDILVYSKNEEDHVVHLGKVLSSLREHS 588

Query: 61  LYANKKKCSFAQLKVEYLGQIISGKGVEVDPEKIRSIADWPTPTNVRETRGFLGLTDY 119
           LYANKKK SFAQLKVEYL  II G GVEVDP+KIRSIADWPTPTNVRETRGFLGLT Y
Sbjct: 589 LYANKKKGSFAQLKVEYLEHIILGGGVEVDPQKIRSIADWPTPTNVRETRGFLGLTSY 646

[Close]

BLAST of Cmc05g0137391 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 9.9e-17
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 48  YLGKVLSSLREHSLYANKKKCSFAQLKVEYLG--QIISGKGVEVDPEKIRSIADWPTPTN 107
           +LG VL    +H  YAN+KKC+F Q ++ YLG   IISG+GV  DP K+ ++  WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VRETRGFLGLTDY 119
             E RGFLGLT Y
Sbjct: 63  TTELRGFLGLTGY 75

The following BLAST results are available for this feature:

BLAST of Cmc05g0137391 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27013.1	3.0e-52	90.68	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
TYK01195.1	4.0e-52	91.53	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0062661.1	4.0e-52	91.53	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK24006.1	2.4e-49	87.29	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]
KAA0061922.1	2.4e-49	87.29	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0137391 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8I7P9	2.2e-21	40.68	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P04323	2.9e-21	42.37	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.1e-19	38.98	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10401	1.8e-18	37.29	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P0CT41	3.3e-17	36.97	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc05g0137391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DTQ1	1.5e-52	90.68	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3BPU7	1.9e-52	91.53	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7VAG8	1.9e-52	91.53	Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DK67	1.2e-49	87.29	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7V139	1.2e-49	87.29	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Cmc05g0137391 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	9.9e-17	52.05	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 91..124 e-value: 2.2E-5 score: 26.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 1.7E-30 score: 107.6
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 2..82 e-value: 4.0E-15 score: 55.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 12.175956
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 17..118
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 17..118
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 6.59916E-35 score: 116.926
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0137391.1	Cmc05g0137391.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004601	peroxidase activity