Cmc05g0136861 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTTCTTTTGGTTGGTTACTGTGGCATTATTAGTGATGGTTGAAAGAAGCATAGCAACCCCACTTGAGCATTGGGGTGTGCGGATATCTAATGACATGCAAAGCAAACAAACCTTATTTCTTCATTGTAAGTCCAAAGACGATGATCTTGGACGCCTAAACCTAGGTTTTGCTCAATCATTTTCATGGAGATTTAAAGTGAATTTGTGGCAAACAACACTGTACTGGTGCTACATGCGCAAGAAAGAACCAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAATTTCTAAATCTTGGCTTTCTCATAGATGTCAAGGAAATAGGTGCTTTTGGTCGGTAAGAGATGATGGAATTTATGTTAAAAATATTCCTGAAAATAAGTTTGAGTTACATGCCAAATGGTTGCCTGGTTGGTAA ATGTTTTTCTTTTGGTTGGTTACTGTGGCATTATTAGTGATGGTTGAAAGAAGCATAGCAACCCCACTTGAGCATTGGGGTGTGCGGATATCTAATGACATGCAAAGCAAACAAACCTTATTTCTTCATTGTAAGTCCAAAGACGATGATCTTGGACGCCTAAACCTAGGTTTTGCTCAATCATTTTCATGGAGATTTAAAGTGAATTTGTGGCAAACAACACTGTACTGGTGCTACATGCGCAAGAAAGAACCAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAATTTCTAAATCTTGGCTTTCTCATAGATGTCAAGGAAATAGGTGCTTTTGGTCGGTAAGAGATGATGGAATTTATGTTAAAAATATTCCTGAAAATAAGTTTGAGTTACATGCCAAATGGTTGCCTGGTTGGTAA ATGTTTTTCTTTTGGTTGGTTACTGTGGCATTATTAGTGATGGTTGAAAGAAGCATAGCAACCCCACTTGAGCATTGGGGTGTGCGGATATCTAATGACATGCAAAGCAAACAAACCTTATTTCTTCATTGTAAGTCCAAAGACGATGATCTTGGACGCCTAAACCTAGGTTTTGCTCAATCATTTTCATGGAGATTTAAAGTGAATTTGTGGCAAACAACACTGTACTGGTGCTACATGCGCAAGAAAGAACCAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAATTTCTAAATCTTGGCTTTCTCATAGATGTCAAGGAAATAGGTGCTTTTGGTCGGTAAGAGATGATGGAATTTATGTTAAAAATATTCCTGAAAATAAGTTTGAGTTACATGCCAAATGGTTGCCTGGTTGGTAA MFFFWLVTVALLVMVERSIATPLEHWGVRISNDMQSKQTLFLHCKSKDDDLGRLNLGFAQSFSWRFKVNLWQTTLYWCYMRKKEPNHIALEVFWPESISKSWLSHRCQGNRCFWSVRDDGIYVKNIPENKFELHAKWLPGW Homology
BLAST of Cmc05g0136861 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus]) HSP 1 Score: 192.2 bits (487), Expect = 3.0e-45 Identity = 81/136 (59.56%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of Cmc05g0136861 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 3.2e-34 Identity = 71/119 (59.66%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of Cmc05g0136861 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 3.2e-34 Identity = 71/119 (59.66%), Postives = 78/119 (65.55%), Query Frame = 0
BLAST of Cmc05g0136861 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31 Identity = 66/119 (55.46%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Cmc05g0136861 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31 Identity = 66/119 (55.46%), Postives = 77/119 (64.71%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.6e-26 Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11 Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 37/111 (33.33%), Postives = 53/111 (47.75%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy Swiss-Prot
Match: Q9LW23 (S-protein homolog 22 OS=Arabidopsis thaliana OX=3702 GN=SPH22 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07 Identity = 34/106 (32.08%), Postives = 55/106 (51.89%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.9e-29 Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy TrEMBL
Match: A0A6J1CQW3 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013499 PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 3.3e-29 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy TrEMBL
Match: A0A5N6QHU0 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.6e-28 Identity = 61/121 (50.41%), Postives = 75/121 (61.98%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy TrEMBL
Match: A0A6P4ABD6 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.1e-28 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0
BLAST of Cmc05g0136861 vs. ExPASy TrEMBL
Match: A0A6P5RMF3 (S-protein homolog OS=Prunus avium OX=42229 GN=LOC110750112 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.8e-28 Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 0
BLAST of Cmc05g0136861 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 120.6 bits (301), Expect = 1.0e-27 Identity = 52/126 (41.27%), Postives = 76/126 (60.32%), Query Frame = 0
BLAST of Cmc05g0136861 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-27 Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Cmc05g0136861 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12 Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of Cmc05g0136861 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-11 Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of Cmc05g0136861 vs. TAIR 10
Match: AT5G04047.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10 Identity = 33/116 (28.45%), Postives = 57/116 (49.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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