Cmc05g0136621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0136621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr05: 19887331 .. 19889212 (+)
RNA-Seq Expression	Cmc05g0136621
Synteny	Cmc05g0136621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGATAAAGATATCCCGAAGACGGCTTTTCGCACTCACGAAGGCCACTACGAATTCCTTGTCATGCCGTTTGGACTAACCAACGCCCCGGCCACTTTCCAAGCCCTAATGAATAGCATCTTTAGACCATTTTTGAGAAAGTTCGTACTGGTCTTCTTTGATGACATCCTGATCTACAGCAAGAATGAAAAAGACCACATAGAGCATATTGAAAAGGTCTTTCTTGCACTGAGAAAGCATAGCCTCTTCGCCAATAAAAAGAAGTGCAACTTTGGCCAGAAGAAGGTAGAATACTTGGGACACATCATATCAGGAGAAGGAGTGGAAATAGACTCGGAGAAAATAAAAGCTGTGGCAGATTGGCCATGCCCAACAAATATAAGAGAAGTTCGGGGATTCCTTGGATTAACAGGATACTACAGGAGATTTGTCCAACATTATGGATCAATAGCAGCCCCATTAACCCAACTACTCAAAAAAGAGGGATTCAAATGGAACGAAGATGCGGAAGAATCGTTTCGAAAGCTAAAGTCTGCAATGATGTCTCTACCAACGTTAGCCTTACCCAACTTTACACTCCCATTTGAAATAGAGACAGATGTGTCAGGTTTTGGAGTGGGAGCAGTACTAATCCAGGCAAAGAGACCCATTGCCTTCTACAGCCACACACTATCCATGAGAGATAGAGCTCGGCCAGTATATGAACGAGAGTTGATGGCGGTTGTCCTATCCGTACAAAGATGGAGGCCATACTTGCTTGGGGCAAAATTCGTAGTAAAACCGGATCAAAAATCACTGAAATTTTTGCTAGAACAACGGGTCATCCAGCCACAATATCAAAAATGGTTATCTAAACTATTGGGGTACTCATTTGAAGTGGTGTACAAACCTGGCTTAGAAAATAAAGCAGTCGATGCCTTATCAAGAAGACCACCGGACATACAATTAAACAGTATTTCAATACCATATTGGATGGACTTGGAAACCATAAAGGAAGAAGTAGAAGATGAAAAGCTAAAGAAAATAGCAGCAAGCTTAAACAAAGAGGACGAAGGCCAAACCAACAAATTCACAATAAAGAATAGCCTCCTGCATTACAAGAATAGACTGGTAATCTCAAAAGCGTCCTCCCTAATCCCAGCCATACTAAATACATTTCATGACTCAGTAGTAGGAGGACACTCCGGATTCTTAAGAACTTATAAAAGACTAGCAAGCGAGCTATATTGGGAAGGGATGAAATCAGATGTTAAAAAACATTGTGAAGCTTGCGTAACGTGCCAACGCAACAAAAGCTTAGCTCTATCGCCAGCCGGACTATTAGTACCACTTGACATACCGCATCAAATTTGGAGCGATATCTCCATGGACTTCATTGATGGTTTACCTAAAGCAAAAGGATGGGACGTAATACTTGTGGTAGTAGATCGACTCAGCAAATACAGCCACTTCTTGACCCTTAAACACCCTTACACAGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCTCCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTTTGGAATGAATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGACGGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGCTTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGGTACAACACTACTTATCAAAAGGCGCTGGGACAATCACCCTTCCAAGTGGTCTATGGCCGTAAACCGCCAACCCTATTGTCTTATGGAGAACGAAGAACTTCAAATTCTTCAATAGACGAGCAGTTGA

mRNA sequence

ATGATTGATAAAGATATCCCGAAGACGGCTTTTCGCACTCACGAAGGCCACTACGAATTCCTTGTCATGCCGTTTGGACTAACCAACGCCCCGGCCACTTTCCAAGCCCTAATGAATAGCATCTTTAGACCATTTTTGAGAAAGTTCGTACTGGTCTTCTTTGATGACATCCTGATCTACAGCAAGAATGAAAAAGACCACATAGAGCATATTGAAAAGGTCTTTCTTGCACTGAGAAAGCATAGCCTCTTCGCCAATAAAAAGAAGTGCAACTTTGGCCAGAAGAAGGTAGAATACTTGGGACACATCATATCAGGAGAAGGAGTGGAAATAGACTCGGAGAAAATAAAAGCTGTGGCAGATTGGCCATGCCCAACAAATATAAGAGAAGTTCGGGGATTCCTTGGATTAACAGGATACTACAGGAGATTTGTCCAACATTATGGATCAATAGCAGCCCCATTAACCCAACTACTCAAAAAAGAGGGATTCAAATGGAACGAAGATGCGGAAGAATCGTTTCGAAAGCTAAAGTCTGCAATGATGTCTCTACCAACGTTAGCCTTACCCAACTTTACACTCCCATTTGAAATAGAGACAGATGTGTCAGGTTTTGGAGTGGGAGCAGTACTAATCCAGGCAAAGAGACCCATTGCCTTCTACAGCCACACACTATCCATGAGAGATAGAGCTCGGCCAGTATATGAACGAGAGTTGATGGCGGTTGTCCTATCCGTACAAAGATGGAGGCCATACTTGCTTGGGGCAAAATTCGTAGTAAAACCGGATCAAAAATCACTGAAATTTTTGCTAGAACAACGGGTCATCCAGCCACAATATCAAAAATGGTTATCTAAACTATTGGGGTACTCATTTGAAGTGGTGTACAAACCTGGCTTAGAAAATAAAGCAGTCGATGCCTTATCAAGAAGACCACCGGACATACAATTAAACAGTATTTCAATACCATATTGGATGGACTTGGAAACCATAAAGGAAGAAGTAGAAGATGAAAAGCTAAAGAAAATAGCAGCAAGCTTAAACAAAGAGGACGAAGGCCAAACCAACAAATTCACAATAAAGAATAGCCTCCTGCATTACAAGAATAGACTGGTAATCTCAAAAGCGTCCTCCCTAATCCCAGCCATACTAAATACATTTCATGACTCAGTAGTAGGAGGACACTCCGGATTCTTAAGAACTTATAAAAGACTAGCAAGCGAGCTATATTGGGAAGGGATGAAATCAGATGTTAAAAAACATTGTGAAGCTTGCGTAACGTGCCAACGCAACAAAAGCTTAGCTCTATCGCCAGCCGGACTATTAGTACCACTTGACATACCGCATCAAATTTGGAGCGATATCTCCATGGACTTCATTGATGGTTTACCTAAAGCAAAAGGATGGGACGTAATACTTGTGGTAGTAGATCGACTCAGCAAATACAGCCACTTCTTGACCCTTAAACACCCTTACACAGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCTCCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTTTGGAATGAATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGACGGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGCTTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGTTGA

Coding sequence (CDS)

ATGATTGATAAAGATATCCCGAAGACGGCTTTTCGCACTCACGAAGGCCACTACGAATTCCTTGTCATGCCGTTTGGACTAACCAACGCCCCGGCCACTTTCCAAGCCCTAATGAATAGCATCTTTAGACCATTTTTGAGAAAGTTCGTACTGGTCTTCTTTGATGACATCCTGATCTACAGCAAGAATGAAAAAGACCACATAGAGCATATTGAAAAGGTCTTTCTTGCACTGAGAAAGCATAGCCTCTTCGCCAATAAAAAGAAGTGCAACTTTGGCCAGAAGAAGGTAGAATACTTGGGACACATCATATCAGGAGAAGGAGTGGAAATAGACTCGGAGAAAATAAAAGCTGTGGCAGATTGGCCATGCCCAACAAATATAAGAGAAGTTCGGGGATTCCTTGGATTAACAGGATACTACAGGAGATTTGTCCAACATTATGGATCAATAGCAGCCCCATTAACCCAACTACTCAAAAAAGAGGGATTCAAATGGAACGAAGATGCGGAAGAATCGTTTCGAAAGCTAAAGTCTGCAATGATGTCTCTACCAACGTTAGCCTTACCCAACTTTACACTCCCATTTGAAATAGAGACAGATGTGTCAGGTTTTGGAGTGGGAGCAGTACTAATCCAGGCAAAGAGACCCATTGCCTTCTACAGCCACACACTATCCATGAGAGATAGAGCTCGGCCAGTATATGAACGAGAGTTGATGGCGGTTGTCCTATCCGTACAAAGATGGAGGCCATACTTGCTTGGGGCAAAATTCGTAGTAAAACCGGATCAAAAATCACTGAAATTTTTGCTAGAACAACGGGTCATCCAGCCACAATATCAAAAATGGTTATCTAAACTATTGGGGTACTCATTTGAAGTGGTGTACAAACCTGGCTTAGAAAATAAAGCAGTCGATGCCTTATCAAGAAGACCACCGGACATACAATTAAACAGTATTTCAATACCATATTGGATGGACTTGGAAACCATAAAGGAAGAAGTAGAAGATGAAAAGCTAAAGAAAATAGCAGCAAGCTTAAACAAAGAGGACGAAGGCCAAACCAACAAATTCACAATAAAGAATAGCCTCCTGCATTACAAGAATAGACTGGTAATCTCAAAAGCGTCCTCCCTAATCCCAGCCATACTAAATACATTTCATGACTCAGTAGTAGGAGGACACTCCGGATTCTTAAGAACTTATAAAAGACTAGCAAGCGAGCTATATTGGGAAGGGATGAAATCAGATGTTAAAAAACATTGTGAAGCTTGCGTAACGTGCCAACGCAACAAAAGCTTAGCTCTATCGCCAGCCGGACTATTAGTACCACTTGACATACCGCATCAAATTTGGAGCGATATCTCCATGGACTTCATTGATGGTTTACCTAAAGCAAAAGGATGGGACGTAATACTTGTGGTAGTAGATCGACTCAGCAAATACAGCCACTTCTTGACCCTTAAACACCCTTACACAGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTACGACTGCACGGCTTCCCTACCTCCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCACTTTTGGAATGAATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCCACAGACCGACGGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGCTTTTGTAGTGAACGCCCAAAGGAATGGATCATGTGGCTACCTTGGGCCGAGTACTGTTGA

Protein sequence

MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEYC

Homology

[Close]

BLAST of Cmc05g0136621 vs. NCBI nr
Match: KAA0047643.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0


Query: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
           MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
           SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120

Query: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
           DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
           MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240

Query: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
           AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360
           ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI
Sbjct: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360

Query: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420
           KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK
Sbjct: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420

Query: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480
           HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
Sbjct: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480

Query: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540
           KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK
Sbjct: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540

Query: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
           KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Sbjct: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 584

[Close]

BLAST of Cmc05g0136621 vs. NCBI nr
Match: TYK08301.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 582/584 (99.66%), Postives = 583/584 (99.83%), Query Frame = 0


Query: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
           MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
           SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120

Query: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
           DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
           MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240

Query: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
           AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360
           ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQT+KFTI
Sbjct: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTSKFTI 360

Query: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420
           KNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKK
Sbjct: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKK 420

Query: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480
           HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
Sbjct: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480

Query: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540
           KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK
Sbjct: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540

Query: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
           KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Sbjct: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 583

[Close]

BLAST of Cmc05g0136621 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 567/585 (96.92%), Postives = 574/585 (98.12%), Query Frame = 0


Query: 1    MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
            MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 648  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMNSIFRPFLRKFVLVFFDDILIY 707

Query: 61   SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
            SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE+DSEKIK VA
Sbjct: 708  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKVVA 767

Query: 121  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
            DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSA
Sbjct: 768  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 827

Query: 181  MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
            MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 828  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 887

Query: 241  AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
            AVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 888  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 947

Query: 301  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFT 360
            ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFT
Sbjct: 948  ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1007

Query: 361  IKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 420
            IKNSLLHYKNRLVISKASSLIPAI+NTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK
Sbjct: 1008 IKNSLLHYKNRLVISKASSLIPAIMNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 1067

Query: 421  KHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480
            KHCEACVTCQRNKSLALSP GLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL
Sbjct: 1068 KHCEACVTCQRNKSLALSPVGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1127

Query: 481  SKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540
            SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL
Sbjct: 1128 SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 1187

Query: 541  KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
            KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Sbjct: 1188 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWILWLPWAEY 1232

[Close]

BLAST of Cmc05g0136621 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 570/585 (97.44%), Postives = 576/585 (98.46%), Query Frame = 0


Query: 1    MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
            MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 738  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 797

Query: 61   SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
            SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE+DSEKIKAVA
Sbjct: 798  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 857

Query: 121  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
            DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSA
Sbjct: 858  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 917

Query: 181  MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
            MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 918  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 977

Query: 241  AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
            AVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 978  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 1037

Query: 301  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFT 360
            ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFT
Sbjct: 1038 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1097

Query: 361  IKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 420
            IKNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVK
Sbjct: 1098 IKNSLLHYKNRLVISKASSLIPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVK 1157

Query: 421  KHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480
            KHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL
Sbjct: 1158 KHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1217

Query: 481  SKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540
            SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL
Sbjct: 1218 SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 1277

Query: 541  KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
            KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Sbjct: 1278 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWILWLPWAEY 1321

[Close]

BLAST of Cmc05g0136621 vs. NCBI nr
Match: TYK02030.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1145.6 bits (2962), Expect = 0.0e+00
Identity = 564/585 (96.41%), Postives = 571/585 (97.61%), Query Frame = 0


Query: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
           MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
           SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE+DSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 120

Query: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
           DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
           MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYE ELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYECELM 240

Query: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
           AVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEV YKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVGYKPGL 300

Query: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFT 360
           ENKA DALSRRPPDIQLNSISIPYWMD ETIKEEVE DEKLKKI ASLN+ DE QT+KFT
Sbjct: 301 ENKAADALSRRPPDIQLNSISIPYWMDSETIKEEVEKDEKLKKIVASLNEVDEDQTSKFT 360

Query: 361 IKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 420
           IKNSLLHYKNRLVISKASSLIPAI+NTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVK
Sbjct: 361 IKNSLLHYKNRLVISKASSLIPAIMNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVK 420

Query: 421 KHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480
           KHCEACVTCQRN SLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL
Sbjct: 421 KHCEACVTCQRNNSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480

Query: 481 SKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540
           SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL
Sbjct: 481 SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540

Query: 541 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
           KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Sbjct: 541 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWILWLPWAEY 584

[Close]

BLAST of Cmc05g0136621 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 192/596 (32.21%), Postives = 304/596 (51.01%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNE 64
            D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   KDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVADWPC 124
             +H++H++ V   L+  +L  N+ KC F Q +V+++G+ IS +G     E I  V  W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPTLALPNFTLPFEIETDVSGFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERE 244
             P L   +F+    +ETD S   VGAVL Q        P+ +YS  +S       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV 304
            ++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLK 364
             Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL 
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  KIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR 424
             +   LN ED+       +K+ LL + K+++++   + L   I+  +H+     H G   
Sbjct: 876  NL---LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 935

Query: 425  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFI 484
                +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI
Sbjct: 936  LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 995

Query: 485  DGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRD 544
              LP++ G++ + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D
Sbjct: 996  TALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1055

Query: 545  KVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI 577
             +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Sbjct: 1056 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

[Close]

BLAST of Cmc05g0136621 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 192/596 (32.21%), Postives = 304/596 (51.01%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNE 64
            D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   KDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVADWPC 124
             +H++H++ V   L+  +L  N+ KC F Q +V+++G+ IS +G     E I  V  W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPTLALPNFTLPFEIETDVSGFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERE 244
             P L   +F+    +ETD S   VGAVL Q        P+ +YS  +S       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV 304
            ++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLK 364
             Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL 
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  KIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR 424
             +   LN ED+       +K+ LL + K+++++   + L   I+  +H+     H G   
Sbjct: 876  NL---LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 935

Query: 425  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFI 484
                +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI
Sbjct: 936  LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 995

Query: 485  DGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRD 544
              LP++ G++ + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D
Sbjct: 996  TALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1055

Query: 545  KVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI 577
             +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Sbjct: 1056 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

[Close]

BLAST of Cmc05g0136621 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 192/596 (32.21%), Postives = 304/596 (51.01%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNE 64
            D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   KDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVADWPC 124
             +H++H++ V   L+  +L  N+ KC F Q +V+++G+ IS +G     E I  V  W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPTLALPNFTLPFEIETDVSGFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERE 244
             P L   +F+    +ETD S   VGAVL Q        P+ +YS  +S       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV 304
            ++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLK 364
             Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL 
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  KIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR 424
             +   LN ED+       +K+ LL + K+++++   + L   I+  +H+     H G   
Sbjct: 876  NL---LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 935

Query: 425  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFI 484
                +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI
Sbjct: 936  LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 995

Query: 485  DGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRD 544
              LP++ G++ + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D
Sbjct: 996  TALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1055

Query: 545  KVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI 577
             +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Sbjct: 1056 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

[Close]

BLAST of Cmc05g0136621 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 192/596 (32.21%), Postives = 304/596 (51.01%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNE 64
            D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   KDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVADWPC 124
             +H++H++ V   L+  +L  N+ KC F Q +V+++G+ IS +G     E I  V  W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPTLALPNFTLPFEIETDVSGFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERE 244
             P L   +F+    +ETD S   VGAVL Q        P+ +YS  +S       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV 304
            ++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLK 364
             Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL 
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  KIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR 424
             +   LN ED+       +K+ LL + K+++++   + L   I+  +H+     H G   
Sbjct: 876  NL---LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 935

Query: 425  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFI 484
                +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI
Sbjct: 936  LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 995

Query: 485  DGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRD 544
              LP++ G++ + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D
Sbjct: 996  TALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1055

Query: 545  KVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI 577
             +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Sbjct: 1056 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

[Close]

BLAST of Cmc05g0136621 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-89
Identity = 192/596 (32.21%), Postives = 304/596 (51.01%), Query Frame = 0


Query: 5    DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIYSKNE 64
            D  K AFR   G +E+LVMP+G++ APA FQ  +N+I        V+ + DDILI+SK+E
Sbjct: 516  DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 65   KDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVADWPC 124
             +H++H++ V   L+  +L  N+ KC F Q +V+++G+ IS +G     E I  V  W  
Sbjct: 576  SEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQ 635

Query: 125  PTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKE-GFKWNEDAEESFRKLKSAMMS 184
            P N +E+R FLG   Y R+F+     +  PL  LLKK+  +KW     ++   +K  ++S
Sbjct: 636  PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 695

Query: 185  LPTLALPNFTLPFEIETDVSGFGVGAVLIQAK-----RPIAFYSHTLSMRDRARPVYERE 244
             P L   +F+    +ETD S   VGAVL Q        P+ +YS  +S       V ++E
Sbjct: 696  PPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKE 755

Query: 245  LMAVVLSVQRWRPYLLGA--KFVVKPDQKSL--KFLLEQRVIQPQYQKWLSKLLGYSFEV 304
            ++A++ S++ WR YL      F +  D ++L  +   E      +  +W   L  ++FE+
Sbjct: 756  MLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815

Query: 305  VYKPGLENKAVDALSR-------RPPDIQLNSISIPYWMDL------ETIKEEVEDEKLK 364
             Y+PG  N   DALSR        P D + NSI+    + +      + + E   D KL 
Sbjct: 816  NYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL 875

Query: 365  KIAASLNKEDEGQTNKFTIKNSLL-HYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLR 424
             +   LN ED+       +K+ LL + K+++++   + L   I+  +H+     H G   
Sbjct: 876  NL---LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIEL 935

Query: 425  TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFI 484
                +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SMDFI
Sbjct: 936  LTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFI 995

Query: 485  DGLPKAKGWDVILVVVDRLSKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRD 544
              LP++ G++ + VVVDR SK +  +      TA+  A  F + ++   G P  I++D D
Sbjct: 996  TALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1055

Query: 545  KVFLSHFWNELFKMAGTKLKKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI 577
             +F S  W +        +K S  Y PQTDGQTE  N+ +E  LRC CS  P  W+
Sbjct: 1056 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

[Close]

BLAST of Cmc05g0136621 vs. ExPASy TrEMBL
Match: A0A5A7TVR3 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001270 PE=4 SV=1)

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0


Query: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
           MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
           SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120

Query: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
           DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
           MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240

Query: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
           AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360
           ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI
Sbjct: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360

Query: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420
           KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK
Sbjct: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420

Query: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480
           HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
Sbjct: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480

Query: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540
           KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK
Sbjct: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540

Query: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
           KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Sbjct: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 584

[Close]

BLAST of Cmc05g0136621 vs. ExPASy TrEMBL
Match: A0A5D3C8Y2 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00850 PE=4 SV=1)

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 582/584 (99.66%), Postives = 583/584 (99.83%), Query Frame = 0


Query: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
           MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
           SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120

Query: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
           DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
           MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240

Query: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
           AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300

Query: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTNKFTI 360
           ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQT+KFTI
Sbjct: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVEDEKLKKIAASLNKEDEGQTSKFTI 360

Query: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVKK 420
           KNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKK
Sbjct: 361 KNSLLHYKNRLVISKASSLIPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKK 420

Query: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480
           HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS
Sbjct: 421 HCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRLS 480

Query: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540
           KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK
Sbjct: 481 KYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLK 540

Query: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
           KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY
Sbjct: 541 KSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 583

[Close]

BLAST of Cmc05g0136621 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 567/585 (96.92%), Postives = 574/585 (98.12%), Query Frame = 0


Query: 1    MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
            MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAP TFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 648  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQALMNSIFRPFLRKFVLVFFDDILIY 707

Query: 61   SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
            SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE+DSEKIK VA
Sbjct: 708  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKVVA 767

Query: 121  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
            DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSA
Sbjct: 768  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 827

Query: 181  MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
            MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 828  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 887

Query: 241  AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
            AVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 888  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 947

Query: 301  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFT 360
            ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFT
Sbjct: 948  ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1007

Query: 361  IKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 420
            IKNSLLHYKNRLVISKASSLIPAI+NTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK
Sbjct: 1008 IKNSLLHYKNRLVISKASSLIPAIMNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 1067

Query: 421  KHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480
            KHCEACVTCQRNKSLALSP GLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL
Sbjct: 1068 KHCEACVTCQRNKSLALSPVGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1127

Query: 481  SKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540
            SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL
Sbjct: 1128 SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 1187

Query: 541  KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
            KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Sbjct: 1188 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWILWLPWAEY 1232

[Close]

BLAST of Cmc05g0136621 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 570/585 (97.44%), Postives = 576/585 (98.46%), Query Frame = 0


Query: 1    MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
            MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 738  MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 797

Query: 61   SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
            SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE+DSEKIKAVA
Sbjct: 798  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 857

Query: 121  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
            DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSA
Sbjct: 858  DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 917

Query: 181  MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
            MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYERELM
Sbjct: 918  MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYERELM 977

Query: 241  AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
            AVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL
Sbjct: 978  AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 1037

Query: 301  ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFT 360
            ENKA DALSRRPPDIQLNSISIPYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFT
Sbjct: 1038 ENKAADALSRRPPDIQLNSISIPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFT 1097

Query: 361  IKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 420
            IKNSLLHYKNRLVISKASSLIPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVK
Sbjct: 1098 IKNSLLHYKNRLVISKASSLIPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVK 1157

Query: 421  KHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480
            KHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL
Sbjct: 1158 KHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 1217

Query: 481  SKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540
            SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL
Sbjct: 1218 SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 1277

Query: 541  KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
            KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Sbjct: 1278 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWILWLPWAEY 1321

[Close]

BLAST of Cmc05g0136621 vs. ExPASy TrEMBL
Match: A0A5D3BSD7 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00120 PE=4 SV=1)

HSP 1 Score: 1145.6 bits (2962), Expect = 0.0e+00
Identity = 564/585 (96.41%), Postives = 571/585 (97.61%), Query Frame = 0


Query: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60
           MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY
Sbjct: 1   MIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNSIFRPFLRKFVLVFFDDILIY 60

Query: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEIDSEKIKAVA 120
           SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVE+DSEKIKAVA
Sbjct: 61  SKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLGHIISGEGVEVDSEKIKAVA 120

Query: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSA 180
           DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKK GFKWNEDAEESFRKLKSA
Sbjct: 121 DWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWNEDAEESFRKLKSA 180

Query: 181 MMSLPTLALPNFTLPFEIETDVSGFGVGAVLIQAKRPIAFYSHTLSMRDRARPVYERELM 240
           MMSLPTLALPNFTLPFEIETD SGFGVGAVLIQ+KRPIAFYSHTLSMRDRARPVYE ELM
Sbjct: 181 MMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKRPIAFYSHTLSMRDRARPVYECELM 240

Query: 241 AVVLSVQRWRPYLLGAKFVVKPDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVVYKPGL 300
           AVVLSVQRWRPYLLGAKFVVK DQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEV YKPGL
Sbjct: 241 AVVLSVQRWRPYLLGAKFVVKTDQKSLKFLLEQRVIQPQYQKWLSKLLGYSFEVGYKPGL 300

Query: 301 ENKAVDALSRRPPDIQLNSISIPYWMDLETIKEEVE-DEKLKKIAASLNKEDEGQTNKFT 360
           ENKA DALSRRPPDIQLNSISIPYWMD ETIKEEVE DEKLKKI ASLN+ DE QT+KFT
Sbjct: 301 ENKAADALSRRPPDIQLNSISIPYWMDSETIKEEVEKDEKLKKIVASLNEVDEDQTSKFT 360

Query: 361 IKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGGHSGFLRTYKRLASELYWEGMKSDVK 420
           IKNSLLHYKNRLVISKASSLIPAI+NTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVK
Sbjct: 361 IKNSLLHYKNRLVISKASSLIPAIMNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVK 420

Query: 421 KHCEACVTCQRNKSLALSPAGLLVPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480
           KHCEACVTCQRN SLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL
Sbjct: 421 KHCEACVTCQRNNSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILVVVDRL 480

Query: 481 SKYSHFLTLKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540
           SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL
Sbjct: 481 SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKL 540

Query: 541 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWIMWLPWAEY 585
           KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWI+WLPWAEY
Sbjct: 541 KKSTAYHPQTDGQTEVVNRGLETYLRCFCSERPKEWILWLPWAEY 584

[Close]

BLAST of Cmc05g0136621 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 3.0e-36
Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 68  IEHIEKVFLALRKHSLFANKKKCNFGQKKVEYLG--HIISGEGVEIDSEKIKAVADWPCP 127
           + H+  V     +H  +AN+KKC FGQ ++ YLG  HIISGEGV  D  K++A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 128 TNIREVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKEGFKWNEDAEESFRKLKSAMMSLP 187
            N  E+RGFLGLTGYYRRFV++YG I  PLT+LLKK   KW E A  +F+ LK A+ +LP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 188 TLALPNFTLPF 197
            LALP+  LPF
Sbjct: 121 VLALPDLKLPF 131

The following BLAST results are available for this feature:

BLAST of Cmc05g0136621 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047643.1	0.0e+00	100.00	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK08301.1	0.0e+00	99.66	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK23779.1	0.0e+00	96.92	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK02195.1	0.0e+00	97.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK02030.1	0.0e+00	96.41	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0136621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.3e-89	32.21	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-89	32.21	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.3e-89	32.21	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.3e-89	32.21	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.3e-89	32.21	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc05g0136621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVR3	0.0e+00	100.00	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3C8Y2	0.0e+00	99.66	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3DKH5	0.0e+00	96.92	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BSP2	0.0e+00	97.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BSD7	0.0e+00	96.41	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cmc05g0136621 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.0e-36	54.20	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 194..261 e-value: 9.7E-8 score: 33.9
None	No IPR available	GENE3D	1.10.340.70		coord: 341..432 e-value: 6.2E-18 score: 66.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 3..29 e-value: 6.4E-41 score: 142.0
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 1..312 coord: 357..565
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 197..312 e-value: 7.41448E-44 score: 150.336
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..104 e-value: 3.45195E-52 score: 174.706
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 442..585 e-value: 5.2E-38 score: 132.3
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 166..260 e-value: 2.1E-29 score: 101.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 113..193 e-value: 6.4E-29 score: 101.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 30..104 e-value: 6.4E-41 score: 142.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 13..104 e-value: 3.0E-21 score: 76.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..104 score: 14.96382
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 378..433 e-value: 2.1E-18 score: 66.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 444..585 score: 15.87009
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..297
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 445..584

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0136621.1	Cmc05g0136621.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding