Cmc05g0136331 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0136331
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr05: 19334224 .. 19334808 (-)
RNA-Seq Expression	Cmc05g0136331
Synteny	Cmc05g0136331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCTCTTCAAACCATCCACTTTACTGTCGTACTACATATCCTTCGCTATGTCAAGGGAACTTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATATGGCTATTCCGATGCAGATTGGGCTGAGGATCCCACTGATAGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCATAGTAAGAAACAAAGTGTTGTCTCTCGTTCGAGTACTGAATCAAAATATCGTGCTCTTGCTAATGCTACCGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCACCAGGGTCCCACTCTTCTTCATTGTGACAATCATAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATCCGTCATCATCTCTTGAGCCATACACTTCTTTTGCAACATGTCTCCACCACTAAGCAACTAGCCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCCAGCTGACAGCTACTCTACCACCTTGA

mRNA sequence

ATGATTGCTCTTCAAACCATCCACTTTACTGTCGTACTACATATCCTTCGCTATGTCAAGGGAACTTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATATGGCTATTCCGATGCAGATTGGGCTGAGGATCCCACTGATAGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCATAGTAAGAAACAAAGTGTTGTCTCTCGTTCGAGTACTGAATCAAAATATCGTGCTCTTGCTAATGCTACCGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCACCAGGGTCCCACTCTTCTTCATTGTGACAATCATAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATCCGTCATCATCTCTTGAGCCATACACTTCTTTTGCAACATGTCTCCACCACTAAGCAACTAGCCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCCAGCTGACAGCTACTCTACCACCTTGA

Coding sequence (CDS)

ATGATTGCTCTTCAAACCATCCACTTTACTGTCGTACTACATATCCTTCGCTATGTCAAGGGAACTTTGGGACATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATATGGCTATTCCGATGCAGATTGGGCTGAGGATCCCACTGATAGGCGTTCTACAACCGGTTACTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCATAGTAAGAAACAAAGTGTTGTCTCTCGTTCGAGTACTGAATCAAAATATCGTGCTCTTGCTAATGCTACCGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCACCAGGGTCCCACTCTTCTTCATTGTGACAATCATAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATCCGTCATCATCTCTTGAGCCATACACTTCTTTTGCAACATGTCTCCACCACTAAGCAACTAGCCGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAGATACGTACCAAACTCCAGCTGACAGCTACTCTACCACCTTGA

Protein sequence

MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDNHSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFNQIRTKLQLTATLPP

Homology

[Close]

BLAST of Cmc05g0136331 vs. NCBI nr
Match: TYK08350.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.2e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
           MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF
Sbjct: 584 MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 643

Query: 61  YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
           YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN
Sbjct: 644 YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 703

Query: 121 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
           HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN
Sbjct: 704 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 763

Query: 181 QIRTKLQLTATLPP 195
           QIRTKLQLTATLPP
Sbjct: 764 QIRTKLQLTATLPP 777

[Close]

BLAST of Cmc05g0136331 vs. NCBI nr
Match: KAA0047696.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.2e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
           MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF
Sbjct: 584 MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 643

Query: 61  YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
           YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN
Sbjct: 644 YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 703

Query: 121 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
           HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN
Sbjct: 704 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 763

Query: 181 QIRTKLQLTATLPP 195
           QIRTKLQLTATLPP
Sbjct: 764 QIRTKLQLTATLPP 777

[Close]

BLAST of Cmc05g0136331 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-94
Identity = 177/194 (91.24%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1    MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
            M A +TIHFT VL ILRYVKGTLGHGLQFSSQSSLVL GYSDADWA DPTDRRSTTGYCF
Sbjct: 1141 MAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1200

Query: 61   YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
            YLGDSLISW SKKQSVVSRSSTES+YRALA+ATAELLWLRWLLADMGVP QGPTLLHCDN
Sbjct: 1201 YLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDN 1260

Query: 121  HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
             SAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQ +STT+Q ADIFTKALPSTRFN
Sbjct: 1261 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFN 1320

Query: 181  QIRTKLQLTATLPP 195
            QIRTKL+LTATLPP
Sbjct: 1321 QIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc05g0136331 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 355.5 bits (911), Expect = 2.9e-94
Identity = 177/194 (91.24%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1    MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
            M A +TIHFT VL ILRYVKGTLGHGLQFSSQSSLVL GYSDADWA DPTDRRSTTGYCF
Sbjct: 1141 MAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1200

Query: 61   YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
            YLGDSLISW SKKQSVVSRSSTES+YRALA+ATAELLWLRWLLADMGVP QGPTLLHCDN
Sbjct: 1201 YLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDN 1260

Query: 121  HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
             SAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQ +STT+Q ADIFTKALPSTRFN
Sbjct: 1261 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFN 1320

Query: 181  QIRTKLQLTATLPP 195
            QIRTKL+LTATLPP
Sbjct: 1321 QIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc05g0136331 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 8.3e-94
Identity = 176/194 (90.72%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1    MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
            M A +TIHFT VL ILRYVKGTLGHGLQFSSQSSLVL GYSDADWA DPTDRRSTTGYCF
Sbjct: 1141 MAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1200

Query: 61   YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
            YLGDSLISW SKKQSVVSRSSTES+YRALA+ATAELLWLRWLLADMGVP QGPTLLHCDN
Sbjct: 1201 YLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDN 1260

Query: 121  HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
             SAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQ +STT+Q ADIFTKALPSTRFN
Sbjct: 1261 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFN 1320

Query: 181  QIRTKLQLTATLPP 195
            QIRTKL+LTA+LPP
Sbjct: 1321 QIRTKLKLTASLPP 1334

[Close]

BLAST of Cmc05g0136331 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.0e-38
Identity = 85/186 (45.70%), Postives = 112/186 (60.22%), Query Frame = 0


Query: 8    HFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLI 67
            H   +  ILRY+ GT  HG+     ++L L+ YSDADWA D  D  ST GY  YLG   I
Sbjct: 1280 HLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPI 1339

Query: 68   SWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDNHSAIQIA 127
            SW SKKQ  V RSSTE++YR++AN ++E+ W+  LL ++G+    P +++CDN  A  + 
Sbjct: 1340 SWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLC 1399

Query: 128  HNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFNQIRTKLQ 187
             N VFH R KHI  D HFIR+ + S  L + HVST  QLAD  TK L  T F    +K+ 
Sbjct: 1400 ANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIG 1459

Query: 188  LTATLP 194
            +T   P
Sbjct: 1460 VTRVPP 1465

[Close]

BLAST of Cmc05g0136331 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.3e-37
Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 8    HFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLI 67
            H+  +  +LRY+ GT  HG+     ++L L+ YSDADWA D  D  ST GY  YLG   I
Sbjct: 1263 HWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPI 1322

Query: 68   SWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDNHSAIQIA 127
            SW SKKQ  V RSSTE++YR++AN ++EL W+  LL ++G+    P +++CDN  A  + 
Sbjct: 1323 SWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLC 1382

Query: 128  HNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFNQIRTKLQ 187
             N VFH R KHI  D HFIR+ + S  L + HVST  QLAD  TK L    F     K+ 
Sbjct: 1383 ANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIG 1442

Query: 188  LTATLP 194
            +    P
Sbjct: 1443 VIKVPP 1448

[Close]

BLAST of Cmc05g0136331 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 76/177 (42.94%), Postives = 112/177 (63.28%), Query Frame = 0


Query: 15   ILRYVKGTLGHGLQFSSQSSL--VLYGYSDADWAEDPTDRRSTTGYCFYLGD-SLISWHS 74
            +LRY+KGT+   L F    +    + GY D+DWA    DR+STTGY F + D +LI W++
Sbjct: 1224 VLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNT 1283

Query: 75   KKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDNHSAIQIAHNDV 134
            K+Q+ V+ SSTE++Y AL  A  E LWL++LL  + +  + P  ++ DN   I IA+N  
Sbjct: 1284 KRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPS 1343

Query: 135  FHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFNQIRTKLQL 189
             H+R KHI+   HF R  + ++ + L+++ T  QLADIFTK LP+ RF ++R KL L
Sbjct: 1344 CHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc05g0136331 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-28
Identity = 69/172 (40.12%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 8    HFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLI 67
            H+  V  ILRY++GT G  L F   S  +L GY+DAD A D  +R+S+TGY F      I
Sbjct: 1147 HWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAI 1206

Query: 68   SWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDNHSAIQIA 127
            SW SK Q  V+ S+TE++Y A      E++WL+  L ++G+ HQ   +++CD+ SAI ++
Sbjct: 1207 SWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL-HQKEYVVYCDSQSAIDLS 1266

Query: 128  HNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRF 180
             N ++H RTKHI+   H+IR  +   +L +  +ST +  AD+ TK +P  +F
Sbjct: 1267 KNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

[Close]

BLAST of Cmc05g0136331 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.3e-20
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 9   FTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLIS 68
           F ++  +LRYVKGT+ HGL     S L +  + D+DWA   + RRSTTG+C +LG ++IS
Sbjct: 136 FDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIIS 195

Query: 69  WHSKKQSVVSRSSTESKYRALANATAELLW 99
           W +K+Q  VSRSSTE++YRALA   AEL W
Sbjct: 196 WSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc05g0136331 vs. ExPASy TrEMBL
Match: A0A5A7U0E2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G002060 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
           MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF
Sbjct: 584 MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 643

Query: 61  YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
           YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN
Sbjct: 644 YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 703

Query: 121 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
           HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN
Sbjct: 704 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 763

Query: 181 QIRTKLQLTATLPP 195
           QIRTKLQLTATLPP
Sbjct: 764 QIRTKLQLTATLPP 777

[Close]

BLAST of Cmc05g0136331 vs. ExPASy TrEMBL
Match: A0A5D3CAH0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001580 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
           MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF
Sbjct: 584 MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 643

Query: 61  YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
           YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN
Sbjct: 644 YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 703

Query: 121 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
           HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN
Sbjct: 704 HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 763

Query: 181 QIRTKLQLTATLPP 195
           QIRTKLQLTATLPP
Sbjct: 764 QIRTKLQLTATLPP 777

[Close]

BLAST of Cmc05g0136331 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.4e-94
Identity = 177/194 (91.24%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1    MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
            M A +TIHFT VL ILRYVKGTLGHGLQFSSQSSLVL GYSDADWA DPTDRRSTTGYCF
Sbjct: 1141 MAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1200

Query: 61   YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
            YLGDSLISW SKKQSVVSRSSTES+YRALA+ATAELLWLRWLLADMGVP QGPTLLHCDN
Sbjct: 1201 YLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDN 1260

Query: 121  HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
             SAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQ +STT+Q ADIFTKALPSTRFN
Sbjct: 1261 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFN 1320

Query: 181  QIRTKLQLTATLPP 195
            QIRTKL+LTATLPP
Sbjct: 1321 QIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc05g0136331 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.4e-94
Identity = 177/194 (91.24%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1    MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
            M A +TIHFT VL ILRYVKGTLGHGLQFSSQSSLVL GYSDADWA DPTDRRSTTGYCF
Sbjct: 1141 MAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1200

Query: 61   YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
            YLGDSLISW SKKQSVVSRSSTES+YRALA+ATAELLWLRWLLADMGVP QGPTLLHCDN
Sbjct: 1201 YLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDN 1260

Query: 121  HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
             SAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQ +STT+Q ADIFTKALPSTRFN
Sbjct: 1261 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFN 1320

Query: 181  QIRTKLQLTATLPP 195
            QIRTKL+LTATLPP
Sbjct: 1321 QIRTKLKLTATLPP 1334

[Close]

BLAST of Cmc05g0136331 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.0e-94
Identity = 176/194 (90.72%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1    MIALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCF 60
            M A +TIHFT VL ILRYVKGTLGHGLQFSSQSSLVL GYSDADWA DPTDRRSTTGYCF
Sbjct: 1141 MAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1200

Query: 61   YLGDSLISWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDN 120
            YLGDSLISW SKKQSVVSRSSTES+YRALA+ATAELLWLRWLLADMGVP QGPTLLHCDN
Sbjct: 1201 YLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHCDN 1260

Query: 121  HSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQHVSTTKQLADIFTKALPSTRFN 180
             SAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQ +STT+Q ADIFTKALPSTRFN
Sbjct: 1261 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTRFN 1320

Query: 181  QIRTKLQLTATLPP 195
            QIRTKL+LTA+LPP
Sbjct: 1321 QIRTKLKLTASLPP 1334

[Close]

BLAST of Cmc05g0136331 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-39
Identity = 78/140 (55.71%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 8   HFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLI 67
           H   V+ IL Y+KGT+G GL +SSQ+ + L  +SDA +      RRST GYC +LG SLI
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472

Query: 68  SWHSKKQSVVSRSSTESKYRALANATAELLWLRWLLADMGVPHQGPTLLHCDNHSAIQIA 127
           SW SKKQ VVS+SS E++YRAL+ AT E++WL     ++ +P   PTLL CDN +AI IA
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIA 532

Query: 128 HNDVFHERTKHIENDCHFIR 148
            N VFHERTKHIE+DCH +R
Sbjct: 533 TNAVFHERTKHIESDCHSVR 552

[Close]

BLAST of Cmc05g0136331 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 4.5e-21
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 9   FTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYCFYLGDSLIS 68
           F ++  +LRYVKGT+ HGL     S L +  + D+DWA   + RRSTTG+C +LG ++IS
Sbjct: 136 FDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIIS 195

Query: 69  WHSKKQSVVSRSSTESKYRALANATAELLW 99
           W +K+Q  VSRSSTE++YRALA   AEL W
Sbjct: 196 WSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc05g0136331 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 3  ALQTIHFTVVLHILRYVKGTLGHGLQFSSQSSLVLYGYSDADWAEDPTDRRSTTGYC 60
          A +T     V  +L YVKGT+G GL +S+ S L L  ++D+DWA  P  RRS TG+C
Sbjct: 23 ASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc05g0136331 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08350.1	4.2e-106	100.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0047696.1	4.2e-106	100.00	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0037745.1	2.9e-94	91.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	2.9e-94	91.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	8.3e-94	90.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc05g0136331 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.0e-38	45.70	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.3e-37	44.62	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.7e-33	42.94	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	2.2e-28	40.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	6.3e-20	52.22	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc05g0136331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0E2	2.1e-106	100.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CAH0	2.1e-106	100.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7VIT8	1.4e-94	91.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	1.4e-94	91.24	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	4.0e-94	90.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc05g0136331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.8e-39	55.71	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.5e-21	52.22	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	5.1e-09	47.37	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 68..188
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 68..188
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 38..176 e-value: 3.44288E-77 score: 225.425
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 15..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0136331.1	Cmc05g0136331.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding