Cmc05g0136131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0136131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 18976839 .. 18977330 (+)
RNA-Seq Expression	Cmc05g0136131
Synteny	Cmc05g0136131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCACCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGA

mRNA sequence

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCACCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGA

Coding sequence (CDS)

ATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGAGAGTACCCCGACGTTTTCCCAGACGAACTTCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCAATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCAGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCACCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCTTGCCCAGGATTGATGACCTGTTCGATCAGTTGCAGGGAGCCACCGTCTTCTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGA

Protein sequence

MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPCPGLMTCSISCREPPSSPRSTCDQAITS

Homology

[Close]

BLAST of Cmc05g0136131 vs. NCBI nr
Match: KAA0025442.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 289.3 bits (739), Expect = 2.1e-74
Identity = 146/163 (89.57%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWG+LAS VD RE EVSLSSEPVVR+YPDVFPDEL GLPPPRE+DFAIEL
Sbjct: 1   MKASKLLSQGTWGVLASAVDTRELEVSLSSEPVVRKYPDVFPDELLGLPPPRELDFAIEL 60

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E GTAPISRAPYRMAPAELKELKVQL ELLDKGFIRPSVSPWGAPV FVKKKDGSMRLCI
Sbjct: 61  ESGTAPISRAPYRMAPAELKELKVQLLELLDKGFIRPSVSPWGAPVFFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPCPGLMTCSISCREPPSSPRSTCDQAITS 164
           DYRELNKVTVKNRYPCPGLMTCS S RE  S PRST DQA TS
Sbjct: 121 DYRELNKVTVKNRYPCPGLMTCSTSYRESLSFPRSTYDQATTS 163

[Close]

BLAST of Cmc05g0136131 vs. NCBI nr
Match: KAA0036153.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK01765.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 277.7 bits (709), Expect = 6.4e-71
Identity = 138/163 (84.66%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQG WGILASVVD RE EVSLSSEPV REYPDVF DELPGLPPPRE+DF IEL
Sbjct: 327 MKASKLLSQGNWGILASVVDTRESEVSLSSEPVAREYPDVFSDELPGLPPPREIDFTIEL 386

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPY+MAPAELKELKVQLQELL+KGFI+P+VSPWGA VLFVKKKDGSMRLCI
Sbjct: 387 EPGTAPISRAPYKMAPAELKELKVQLQELLNKGFIQPNVSPWGASVLFVKKKDGSMRLCI 446

Query: 121 DYRELNKVTVKNRYPCPGLMTCSISCREPPSSPRSTCDQAITS 164
            YRELNKVT+KNRYP P LMTCS SCR+P S  R T DQ IT+
Sbjct: 447 HYRELNKVTIKNRYPFPRLMTCSTSCRDPSSFLRLTYDQPITN 489

[Close]

BLAST of Cmc05g0136131 vs. NCBI nr
Match: KAA0046571.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 526 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121 DYRELNKVTVKNRYPCP 138
           DYRELNKVTVKNRYP P
Sbjct: 646 DYRELNKVTVKNRYPLP 662

[Close]

BLAST of Cmc05g0136131 vs. NCBI nr
Match: KAA0042912.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 393 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 452

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 453 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 512

Query: 121 DYRELNKVTVKNRYPCP 138
           DYRELNKVTVKNRYP P
Sbjct: 513 DYRELNKVTVKNRYPLP 529

[Close]

BLAST of Cmc05g0136131 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 500 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 559

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 560 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 619

Query: 121 DYRELNKVTVKNRYPCP 138
           DYRELNKVTVKNRYP P
Sbjct: 620 DYRELNKVTVKNRYPLP 636

[Close]

BLAST of Cmc05g0136131 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 2   KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 61
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 62  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 121
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 122 FVKKKDGSMRLCIDYRELNKVTVKNRYPCP 138
            V KKDG+ RLC+DYR LNK T+ + +P P
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLP 667

[Close]

BLAST of Cmc05g0136131 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 2   KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 61
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 62  EVD-----FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 121
           +++       IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 122 FVKKKDGSMRLCIDYRELNKVTVKNRYPCP 138
            V KKDG+ RLC+DYR LNK T+ + +P P
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLP 693

[Close]

BLAST of Cmc05g0136131 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 65  APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLC 124
           +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 125 IDYRELNKVTVKNRYPCPGL 140
           IDYR+LN++T+ +RYP P +
Sbjct: 265 IDYRKLNEITIPDRYPIPNM 284

[Close]

BLAST of Cmc05g0136131 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 35/119 (29.41%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPCP 138
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YP P
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 483

[Close]

BLAST of Cmc05g0136131 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 35/119 (29.41%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPCP 138
           ++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YP P
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 483

[Close]

BLAST of Cmc05g0136131 vs. ExPASy TrEMBL
Match: A0A5A7SJT0 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00350 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 146/163 (89.57%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWG+LAS VD RE EVSLSSEPVVR+YPDVFPDEL GLPPPRE+DFAIEL
Sbjct: 1   MKASKLLSQGTWGVLASAVDTRELEVSLSSEPVVRKYPDVFPDELLGLPPPRELDFAIEL 60

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           E GTAPISRAPYRMAPAELKELKVQL ELLDKGFIRPSVSPWGAPV FVKKKDGSMRLCI
Sbjct: 61  ESGTAPISRAPYRMAPAELKELKVQLLELLDKGFIRPSVSPWGAPVFFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPCPGLMTCSISCREPPSSPRSTCDQAITS 164
           DYRELNKVTVKNRYPCPGLMTCS S RE  S PRST DQA TS
Sbjct: 121 DYRELNKVTVKNRYPCPGLMTCSTSYRESLSFPRSTYDQATTS 163

[Close]

BLAST of Cmc05g0136131 vs. ExPASy TrEMBL
Match: A0A5D3BRE1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1323G00080 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71
Identity = 138/163 (84.66%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQG WGILASVVD RE EVSLSSEPV REYPDVF DELPGLPPPRE+DF IEL
Sbjct: 327 MKASKLLSQGNWGILASVVDTRESEVSLSSEPVAREYPDVFSDELPGLPPPREIDFTIEL 386

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPY+MAPAELKELKVQLQELL+KGFI+P+VSPWGA VLFVKKKDGSMRLCI
Sbjct: 387 EPGTAPISRAPYKMAPAELKELKVQLQELLNKGFIQPNVSPWGASVLFVKKKDGSMRLCI 446

Query: 121 DYRELNKVTVKNRYPCPGLMTCSISCREPPSSPRSTCDQAITS 164
            YRELNKVT+KNRYP P LMTCS SCR+P S  R T DQ IT+
Sbjct: 447 HYRELNKVTIKNRYPFPRLMTCSTSCRDPSSFLRLTYDQPITN 489

[Close]

BLAST of Cmc05g0136131 vs. ExPASy TrEMBL
Match: A0A5A7UIB4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001140 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.0e-71
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPCP 138
           DYRELNKVTVKNRYP P
Sbjct: 121 DYRELNKVTVKNRYPLP 137

[Close]

BLAST of Cmc05g0136131 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.0e-71
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 498 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 558 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121 DYRELNKVTVKNRYPCP 138
           DYRELNKVTVKNRYP P
Sbjct: 618 DYRELNKVTVKNRYPLP 634

[Close]

BLAST of Cmc05g0136131 vs. ExPASy TrEMBL
Match: A0A5A7THM7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G004320 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.0e-71
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 393 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 452

Query: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 453 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 512

Query: 121 DYRELNKVTVKNRYPCP 138
           DYRELNKVTVKNRYP P
Sbjct: 513 DYRELNKVTVKNRYPLP 529

[Close]

BLAST of Cmc05g0136131 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 41.2 bits (95), Expect = 9.3e-04
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 82  LKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 115
           LK  L E+L+   I+PS+SP+ +PVL V+KKDG
Sbjct: 45  LKNWLGEMLEARIIQPSISPYSSPVLLVQKKDG 77

The following BLAST results are available for this feature:

BLAST of Cmc05g0136131 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025442.1	2.1e-74	89.57	putative Retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036153.1	6.4e-71	84.66	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK01765.1 ty3-gyp...	[more]
KAA0046571.1	1.9e-70	99.27	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0042912.1	1.9e-70	99.27	pol protein [Cucumis melo var. makuwa]	[more]
KAA0059723.1	1.9e-70	99.27	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0136131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.1e-14	32.67	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.1e-14	32.67	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P20825	5.5e-09	38.75	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q9UR07	5.5e-09	29.41	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	5.5e-09	29.41	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc05g0136131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJT0	1.0e-74	89.57	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3BRE1	3.1e-71	84.66	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UIB4	9.0e-71	99.27	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001140 P...	[more]
A0A5A7V4E4	9.0e-71	99.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7THM7	9.0e-71	99.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44...	[more]

BLAST of Cmc05g0136131 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	9.3e-04	54.55	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 48..162 e-value: 2.0E-35 score: 123.5
None	No IPR available	PANTHER	PTHR24559:SF382	SUBFAMILY NOT NAMED	coord: 26..141
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 26..141
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0136131.1	Cmc05g0136131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding