Cmc05g0135601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0135601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 18011163 .. 18012158 (-)
RNA-Seq Expression	Cmc05g0135601
Synteny	Cmc05g0135601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCAGCAGAATTGAAAGAGTTGAAAGTGCAGTTACAAGAGTTGCTTGATCAAGGCTTCATTCGACCGAGTGTGTCACCTCTGGGTACACCAGTTTTATTTGTTAAGAAGAAGGATGGATTGATGCACCTATTTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAAAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTATTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCAAAGACAGCCTTTCGTTCCGGATATGGACACTATGAGTTTATTGTGATGTCTTTCGGTTTGACGAATGCTCCGGCAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGAGTTCCTGGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTACAAACCCTTCGAGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAAGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTTTGTGGATCCAGCTAAGATAGAGGCAATCACCAGTTGGCCCCGACCTTCCACGATCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAAGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATACCTACTTCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGGGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTATACCGGTTCTTACTATACCTGATGGTTTAGGGAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTCAGAGTAG

mRNA sequence

ATGGCCCCAGCAGAATTGAAAGAGTTGAAAGTGCAGTTACAAGAGTTGCTTGATCAAGGCTTCATTCGACCGAGTGTGTCACCTCTGGGTACACCAGTTTTATTTGTTAAGAAGAAGGATGGATTGATGCACCTATTTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAAAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTATTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCAAAGACAGCCTTTCGTTCCGGATATGGACACTATGAGTTTATTGTGATGTCTTTCGGTTTGACGAATGCTCCGGCAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGAGTTCCTGGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTACAAACCCTTCGAGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAAGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTTTGTGGATCCAGCTAAGATAGAGGCAATCACCAGTTGGCCCCGACCTTCCACGATCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAAGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATACCTACTTCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGGGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTATACCGGTTCTTACTATACCTGATGGTTTAGGGAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTCAGAGTAG

Coding sequence (CDS)

ATGGCCCCAGCAGAATTGAAAGAGTTGAAAGTGCAGTTACAAGAGTTGCTTGATCAAGGCTTCATTCGACCGAGTGTGTCACCTCTGGGTACACCAGTTTTATTTGTTAAGAAGAAGGATGGATTGATGCACCTATTTATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAAAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTATTCTCTAAGATCGACCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATAGGGATGTACCAAAGACAGCCTTTCGTTCCGGATATGGACACTATGAGTTTATTGTGATGTCTTTCGGTTTGACGAATGCTCCGGCAGTGTTTATGGATTTGATGAACAGAGTGTTTAAGGAGTTCCTGGACACTTTTGTGATCGTGTTTATTGATGATATTTTGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTTTTACAAACCCTTCGAGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAAGCAAGTATCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTTTGTGGATCCAGCTAAGATAGAGGCAATCACCAGTTGGCCCCGACCTTCCACGATCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAAGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATACCTACTTCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGGGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTATACCGGTTCTTACTATACCTGATGGTTTAGGGAGTTTTGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACATGATTCAGAGTAG

Protein sequence

MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENFSRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDSE

Homology

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BLAST of Cmc05g0135601 vs. NCBI nr
Match: KAA0049960.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK07691.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 652.1 bits (1681), Expect = 2.5e-183
Identity = 324/331 (97.89%), Postives = 325/331 (98.19%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLD+GFIRPSVSPLG PVLFVKKKDG MHLFIDYRELNKVTVKNR
Sbjct: 336 MAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMHLFIDYRELNKVTVKNR 395

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 396 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSRYGHYEFIVMSFGLT 455

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNKLYAKFS
Sbjct: 456 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLYAKFS 515

Query: 181 KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF
Sbjct: 516 KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 575

Query: 241 SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
           SRI TSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTI VLTIPDGLGSFVIYSDASKKGL
Sbjct: 576 SRIATSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTISVLTIPDGLGSFVIYSDASKKGL 635

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE
Sbjct: 636 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 666

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BLAST of Cmc05g0135601 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 624.0 bits (1608), Expect = 7.3e-175
Identity = 309/331 (93.35%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
           SRI T LTQLTRKGAPFVW KACEDSFQNLKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
           GCVLMQQGKVVAYASRQLKSHEQNYPTHD E
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 910

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BLAST of Cmc05g0135601 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 621.7 bits (1602), Expect = 3.6e-174
Identity = 308/331 (93.05%), Postives = 313/331 (94.56%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
            SRI T LTQLTRKGAPFVW KACEDSFQ LKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD E
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 1164

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BLAST of Cmc05g0135601 vs. NCBI nr
Match: KAA0047433.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 621.7 bits (1602), Expect = 3.6e-174
Identity = 308/331 (93.05%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 1063 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1122

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 1123 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 1182

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 1183 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 1242

Query: 181  KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 1243 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1302

Query: 241  SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
            SRI T LTQLTRKGAPFVW KACEDSFQNLKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 1303 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1362

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD E
Sbjct: 1363 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 1393

[Close]

BLAST of Cmc05g0135601 vs. NCBI nr
Match: KAA0036671.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 620.5 bits (1599), Expect = 8.1e-174
Identity = 307/331 (92.75%), Postives = 312/331 (94.26%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 833  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 892

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 893  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 952

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 953  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1012

Query: 181  KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 1013 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLADYYRRFVENF 1072

Query: 241  SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
            SRI T LTQLTRKG PFVW KACEDSFQNLKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 1073 SRIATPLTQLTRKGTPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1132

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            GCVLMQQGKVVAYASRQLK HEQNYPTHD E
Sbjct: 1133 GCVLMQQGKVVAYASRQLKRHEQNYPTHDLE 1163

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BLAST of Cmc05g0135601 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-67
Identity = 127/330 (38.48%), Postives = 197/330 (59.70%), Query Frame = 0


Query: 8   ELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKD-----GLMHLFIDYRELNKVTVKNRYP 67
           E++ Q+QE+L+QG IR S SP  +P   V KK          + IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF +  GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKC 187
           PA F   MN + +  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENFSR 247
           EF  K+ +FLGH+V+  G+  +P K++AI S+P P+   E+R+FLGL  YYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IPTSLTQLTRKGAPFVWGK-ACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGLG 307
           I   +T   +K       K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            VL Q G  +++ SR L  HE NY   + E
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKE 550

[Close]

BLAST of Cmc05g0135601 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.6e-66
Identity = 126/331 (38.07%), Postives = 197/331 (59.52%), Query Frame = 0


Query: 7   KELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGL-----MHLFIDYRELNKVTVKNRY 66
           +E++ Q+Q++L+QG IR S SP  +P+  V KK          + IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF + +GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSK 186
           APA F   MN + +  L+   +V++DDI+++S +  EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENFS 246
           CEF  ++ +FLGHV++  G+  +P KIEAI  +P P+   E+++FLGL  YYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIPTSLTQLTRKGAPF-VWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 306
            I   +T+  +K           + +F+ LK  +   P+L +PD    F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
           G VL Q G  ++Y SR L  HE NY T + E
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKE 551

[Close]

BLAST of Cmc05g0135601 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.6e-61
Identity = 123/344 (35.76%), Postives = 195/344 (56.69%), Query Frame = 0


Query: 8   ELKVQLQELLDQGFIRPSVSPLGTPVLFVKKK-----DGLMHLFIDYRELNKVTVKNRYP 67
           E++ Q+ ELL  G IRPS SP  +P+  V KK     +    + +D++ LN VT+ + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLTNA 127
           +P I+     L  A  F+ +DL SG+HQ+ +K+ D+PKTAF +  G YEF+ + FGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKC 187
           PA+F  +++ + +E +     V+IDDI+++S+    H ++LR+VL +L    L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENFSR 247
            F   QV FLG++V+  G+  DP K+ AI+  P P+++ E++ FLG+ SYYR+F++++++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 IPTSLTQLTR-----------KGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVI 307
           +   LT LTR              P    +    SF +LK  L +  +L  P     F +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPTHDSE 332
            +DAS   +G VL Q    + + +AY SR L   E+NY T + E
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKE 481

[Close]

BLAST of Cmc05g0135601 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 7.4e-61
Identity = 127/331 (38.37%), Postives = 193/331 (58.31%), Query Frame = 0


Query: 7   KELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNRYPLPRI 66
           +E+   +Q+LLD  FI PS SP  +PV+ V KKDG   L +DYR LNK T+ + +PLPRI
Sbjct: 636 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67  DDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLTNAPAVF 126
           D+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 696 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127 MDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL 186
              M   F++    FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  
Sbjct: 756 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187 KQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENFSRIPTS 246
           ++  FLG+ +    +     K  AI  +P P T+ + + FLG+ +YYRRF+ N S+I   
Sbjct: 816 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247 LTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGLGCVLMQ 306
           +       +   W +  + + + LK  L   PVL   +   ++ + +DASK G+G VL +
Sbjct: 876 IQLFICDKSQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 935

Query: 307 QGK------VVAYASRQLKSHEQNYPTHDSE 332
                    VV Y S+ L+S ++NYP  + E
Sbjct: 936 VDNKNKLVGVVGYFSKSLESAQKNYPAGELE 962

[Close]

BLAST of Cmc05g0135601 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 235.3 bits (599), Expect = 9.6e-61
Identity = 127/331 (38.37%), Postives = 192/331 (58.01%), Query Frame = 0


Query: 7   KELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNRYPLPRI 66
           +E+   +Q+LLD  FI PS SP  +PV+ V KKDG   L +DYR LNK T+ + +PLPRI
Sbjct: 610 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67  DDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLTNAPAVF 126
           D+L  ++  A +F+ +DL SGYHQ+ ++ +D  KTAF +  G YE+ VM FGL NAP+ F
Sbjct: 670 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127 MDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWL 186
              M   F++    FV V++DDILI+S++  EH +HL  VL+ L++  L  K  KC+F  
Sbjct: 730 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187 KQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENFSRIPTS 246
           ++  FLG+ +    +     K  AI  +P P T+ + + FLG+ +YYRRF+ N S+I   
Sbjct: 790 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247 LTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGLGCVLMQ 306
           +       +   W +  + +   LK  L   PVL   +   ++ + +DASK G+G VL +
Sbjct: 850 IQLFICDKSQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 909

Query: 307 QGK------VVAYASRQLKSHEQNYPTHDSE 332
                    VV Y S+ L+S ++NYP  + E
Sbjct: 910 VDNKNKLVGVVGYFSKSLESAQKNYPAGELE 936

[Close]

BLAST of Cmc05g0135601 vs. ExPASy TrEMBL
Match: A0A5A7U3V7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001070 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.2e-183
Identity = 324/331 (97.89%), Postives = 325/331 (98.19%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLD+GFIRPSVSPLG PVLFVKKKDG MHLFIDYRELNKVTVKNR
Sbjct: 336 MAPAELKELKVQLQELLDKGFIRPSVSPLGAPVLFVKKKDGSMHLFIDYRELNKVTVKNR 395

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 396 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSRYGHYEFIVMSFGLT 455

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNKLYAKFS
Sbjct: 456 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLYAKFS 515

Query: 181 KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF
Sbjct: 516 KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 575

Query: 241 SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
           SRI TSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTI VLTIPDGLGSFVIYSDASKKGL
Sbjct: 576 SRIATSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTISVLTIPDGLGSFVIYSDASKKGL 635

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE
Sbjct: 636 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 666

[Close]

BLAST of Cmc05g0135601 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.6e-175
Identity = 309/331 (93.35%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 580 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 640 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181 KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 760 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241 SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
           SRI T LTQLTRKGAPFVW KACEDSFQNLKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 820 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
           GCVLMQQGKVVAYASRQLKSHEQNYPTHD E
Sbjct: 880 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 910

[Close]

BLAST of Cmc05g0135601 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 1.8e-174
Identity = 308/331 (93.05%), Postives = 313/331 (94.56%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
            SRI T LTQLTRKGAPFVW KACEDSFQ LKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD E
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 1164

[Close]

BLAST of Cmc05g0135601 vs. ExPASy TrEMBL
Match: A0A5A7TV57 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00240 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 1.8e-174
Identity = 308/331 (93.05%), Postives = 314/331 (94.86%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 1063 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 1122

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 1123 YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 1182

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFS
Sbjct: 1183 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 1242

Query: 181  KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 1243 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1302

Query: 241  SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
            SRI T LTQLTRKGAPFVW KACEDSFQNLKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 1303 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1362

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            GCVLMQQGKVVAYASRQLKSHEQNYPTHD E
Sbjct: 1363 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 1393

[Close]

BLAST of Cmc05g0135601 vs. ExPASy TrEMBL
Match: A0A5A7T538 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00100 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 3.9e-174
Identity = 307/331 (92.75%), Postives = 312/331 (94.26%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDQGFIRPSVSPLGTPVLFVKKKDGLMHLFIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLD+GFIRPSVSP G PVLFVKKKDG M L IDYRELNKVTVKNR
Sbjct: 833  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 892

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDRDVPKTAFRSGYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRS YGHYEFIVMSFGLT
Sbjct: 893  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 952

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 953  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1012

Query: 181  KCEFWLKQVSFLGHVVSKAGVFVDPAKIEAITSWPRPSTISEVRSFLGLASYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T W RPST+SEVRSFLGLA YYRRFVENF
Sbjct: 1013 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLADYYRRFVENF 1072

Query: 241  SRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPVLTIPDGLGSFVIYSDASKKGL 300
            SRI T LTQLTRKG PFVW KACEDSFQNLKQKLVT PVLT+PDG GSFVIYSDASKKGL
Sbjct: 1073 SRIATPLTQLTRKGTPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1132

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDSE 332
            GCVLMQQGKVVAYASRQLK HEQNYPTHD E
Sbjct: 1133 GCVLMQQGKVVAYASRQLKRHEQNYPTHDLE 1163

[Close]

BLAST of Cmc05g0135601 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-25
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 162 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVFVDPAKIEAITSWPRPST 221
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GV  DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 ISEVRSFLGLASYYRRFVENFSRIPTSLTQLTRKGAPFVWGKACEDSFQNLKQKLVTIPV 281
            +E+R FLGL  YYRRFV+N+ +I   LT+L +K +   W +    +F+ LK  + T+PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTIPD 285
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc05g0135601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049960.1	2.5e-183	97.89	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK07691.1 D...	[more]
KAA0048687.1	7.3e-175	93.35	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	3.6e-174	93.05	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047433.1	3.6e-174	93.05	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036671.1	8.1e-174	92.75	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0135601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	3.1e-67	38.48	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.6e-66	38.07	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	5.6e-61	35.76	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q7LHG5	7.4e-61	38.37	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	9.6e-61	38.37	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc05g0135601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3V7	1.2e-183	97.89	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7U330	3.6e-175	93.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3BPI1	1.8e-174	93.05	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7TV57	1.8e-174	93.05	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7T538	3.9e-174	92.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]

BLAST of Cmc05g0135601 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.0e-25	44.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..296 e-value: 4.5E-29 score: 102.3
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 2.3E-82 score: 277.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 7.4E-27 score: 94.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 9.716076
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 2.3E-82 score: 277.4
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..331
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..331
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 1.87593E-90 score: 265.998
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 259..331 e-value: 1.7E-20 score: 72.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0135601.1	Cmc05g0135601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding