Cmc05g0135531 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0135531
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	CMiso1.1chr05: 17839645 .. 17840352 (-)
RNA-Seq Expression	Cmc05g0135531
Synteny	Cmc05g0135531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACTCACTGCACACTTCATTGATTCATATTGGGTTTTGCATAAAAAAAATTTAAACTTTTGTCAAGTTGCAAACCACAAAGGTGTGACTATTGGAAAGCTCATTGAGAGTTGTTTATTAGAATGGGGGATTGATAAAGTCTTTTCTATAACTGTTGATAATGCAAGTTTGAACGATGGGGAAATTTCATATATTAAGAAAAGACTTAGAAGTAAGAAAACCTTAATATTGGAAGGAGAACTGTTACGCATGAGATGTTGTGCTCACGTAATTAACTTGATTGTAAATGAGGGATTGAAAGAAATGCATGATTTGATTGCTTCTGTTCGTAATGCTGTACGATATGTTATATCATCTTCTAAAAGATTAACAAAGTTTAAAACTTGTGTGGAGCAGCAGAAAATTGATTGCAAAGCTCTTTTTTGTTTGGATGTTCCAACAAGATGGAATTTCACATATCTTATGCTTGAGCATGCACTTAAATTTGAAAAAGCTTTTCAAATATTAGAGGAAGAAGAGTTGGATTATCAAGATTGTTTTGCAAAAGATGAACATGGGAAGAAGAGGATTTGGCCACCAAGTAATTCTAATTGGAAGAATGTTGAAGTGTTTGTCATGTTTTTTAAGGTTTTTTATAATGTTACTAATTTGATTAGTGGTTCCTTATATGTGACTGTCAATTCTTTCTTTAGAATTGAGGAATGA

mRNA sequence

ATGGTACTCACTGCACACTTCATTGATTCATATTGGGTTTTGCATAAAAAAAATTTAAACTTTTGTCAAGTTGCAAACCACAAAGGTGTGACTATTGGAAAGCTCATTGAGAGTTGTTTATTAGAATGGGGGATTGATAAAGTCTTTTCTATAACTGTTGATAATGCAAGTTTGAACGATGGGGAAATTTCATATATTAAGAAAAGACTTAGAAGTAAGAAAACCTTAATATTGGAAGGAGAACTGTTACGCATGAGATGTTGTGCTCACGTAATTAACTTGATTGTAAATGAGGGATTGAAAGAAATGCATGATTTGATTGCTTCTGTTCGTAATGCTGTACGATATGTTATATCATCTTCTAAAAGATTAACAAAGTTTAAAACTTGTGTGGAGCAGCAGAAAATTGATTGCAAAGCTCTTTTTTGTTTGGATGTTCCAACAAGATGGAATTTCACATATCTTATGCTTGAGCATGCACTTAAATTTGAAAAAGCTTTTCAAATATTAGAGGAAGAAGAGTTGGATTATCAAGATTGTTTTGCAAAAGATGAACATGGGAAGAAGAGGATTTGGCCACCAAGTAATTCTAATTGGAAGAATGTTGAAGTGTTTGTCATGTTTTTTAAGGTTTTTTATAATGTTACTAATTTGATTAGTGGTTCCTTATATGTGACTGTCAATTCTTTCTTTAGAATTGAGGAATGA

Coding sequence (CDS)

ATGGTACTCACTGCACACTTCATTGATTCATATTGGGTTTTGCATAAAAAAAATTTAAACTTTTGTCAAGTTGCAAACCACAAAGGTGTGACTATTGGAAAGCTCATTGAGAGTTGTTTATTAGAATGGGGGATTGATAAAGTCTTTTCTATAACTGTTGATAATGCAAGTTTGAACGATGGGGAAATTTCATATATTAAGAAAAGACTTAGAAGTAAGAAAACCTTAATATTGGAAGGAGAACTGTTACGCATGAGATGTTGTGCTCACGTAATTAACTTGATTGTAAATGAGGGATTGAAAGAAATGCATGATTTGATTGCTTCTGTTCGTAATGCTGTACGATATGTTATATCATCTTCTAAAAGATTAACAAAGTTTAAAACTTGTGTGGAGCAGCAGAAAATTGATTGCAAAGCTCTTTTTTGTTTGGATGTTCCAACAAGATGGAATTTCACATATCTTATGCTTGAGCATGCACTTAAATTTGAAAAAGCTTTTCAAATATTAGAGGAAGAAGAGTTGGATTATCAAGATTGTTTTGCAAAAGATGAACATGGGAAGAAGAGGATTTGGCCACCAAGTAATTCTAATTGGAAGAATGTTGAAGTGTTTGTCATGTTTTTTAAGGTTTTTTATAATGTTACTAATTTGATTAGTGGTTCCTTATATGTGACTGTCAATTCTTTCTTTAGAATTGAGGAATGA

Protein sequence

MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLNDGEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISSSKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDCFAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFFRIEE

Homology

[Close]

BLAST of Cmc05g0135531 vs. NCBI nr
Match: KAA0067548.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. NCBI nr
Match: TYK16769.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. NCBI nr
Match: KAA0050616.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 387 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 446

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 447 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 506

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 507 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 566

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 567 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 617

[Close]

BLAST of Cmc05g0135531 vs. NCBI nr
Match: KAA0065439.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa] >TYK07824.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. NCBI nr
Match: TYK26605.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 9.1e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30
Identity = 76/232 (32.76%), Postives = 127/232 (54.74%), Query Frame = 0


Query: 3   LTAHFIDSYWVLHKKNLNFCQVAN-HKGVTIGKLIESCLLEWGI-DKVFSITVDN-ASLN 62
           L   FIDS W +H++ LNF  V++ H    + + I + L +W + DK+F+IT+DN  S +
Sbjct: 254 LAGQFIDSEWKIHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSH 313

Query: 63  DGEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVIS 122
           D   + ++  L +K  L+L+G+L  +RC AH++N +  + +  +H +I ++R +++++ +
Sbjct: 314 DIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKA 373

Query: 123 SSKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQD 182
           S  R  KF     Q +I      CLDV T+WN TYLML  AL +++AF  LE  + +Y +
Sbjct: 374 SPSREEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNE 433

Query: 183 CFAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
                         PS  +WK VE    + K+ Y+  + I  +   T N FF
Sbjct: 434 A-------------PSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFF 472

[Close]

BLAST of Cmc05g0135531 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29
Identity = 75/232 (32.33%), Postives = 126/232 (54.31%), Query Frame = 0


Query: 3   LTAHFIDSYWVLHKKNLNFCQVAN-HKGVTIGKLIESCLLEWGI-DKVFSITVDN-ASLN 62
           L   FIDS W +H++ LNF  V++ H    + + I + L +W + DK+F+IT+DN  S +
Sbjct: 254 LAGQFIDSEWKMHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSH 313

Query: 63  DGEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVIS 122
           D   + ++  L +K  L+L+G+L  +RC AH++N +  + +  +H +I ++R +++++ +
Sbjct: 314 DIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKA 373

Query: 123 SSKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQD 182
           S     KF     Q +I      CLDV T+WN TYLML  AL +++AF  LE  + +Y +
Sbjct: 374 SPSCEEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNE 433

Query: 183 CFAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
                         PS  +WK VE    + K+ Y+  + I  +   T N FF
Sbjct: 434 A-------------PSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFF 472

[Close]

BLAST of Cmc05g0135531 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 71/233 (30.47%), Postives = 123/233 (52.79%), Query Frame = 0


Query: 3   LTAHFIDSYWVLHKKNLNFCQVAN-HKGVTIGKLIESCLLEWGI-DKVFSITVDN--ASL 62
           L A FID+ W +H++ +NF  V++ H   ++ + I + L +W + DK+F+IT+DN  +S 
Sbjct: 294 LAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSEAISTSLSDWNMKDKLFTITLDNDPSSH 353

Query: 63  NDGEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVI 122
           +    + I      K  ++++G+L  +RC AH++N +  + +  +H +I  +R +++++ 
Sbjct: 354 DIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIK 413

Query: 123 SSSKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQ 182
           +SS    KF     Q +I      CLDV T+WN TYLML  AL +++ F  LE  + DY 
Sbjct: 414 ASSVHEDKFAEIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVFASLETCDGDYN 473

Query: 183 DCFAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           +              PS  +WK VE    +  + Y+  + I  +   T N FF
Sbjct: 474 EA-------------PSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFF 513

[Close]

BLAST of Cmc05g0135531 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-24
Identity = 68/235 (28.94%), Postives = 114/235 (48.51%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQV-ANHKGVTIGKLIESCLLEWGID-KVFSITVDNASL 60
           M +T H+ID  W L K+ + F  V   H G  + +   + +++W I+ K+F++++DNAS 
Sbjct: 312 MCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAIMVKWNIEKKLFALSLDNASA 371

Query: 61  NDGEISYIKKRLR-SKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYV 120
           N+  +  I + L+ +   L+ +G    +RC  H++NL+  +GL  +   I  ++  V  V
Sbjct: 372 NEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAV 431

Query: 121 ISSSKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDY 180
            SS  +  +   C  +  +D       DV TRWN TYLML  AL ++ A   L+  +   
Sbjct: 432 KSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRR 491

Query: 181 QDCFAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFFR 233
            D              P    WK         K F+++T L+SG+ Y T N F++
Sbjct: 492 YDAIC-----------PKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYK 535

[Close]

BLAST of Cmc05g0135531 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 71/234 (30.34%), Postives = 116/234 (49.57%), Query Frame = 0


Query: 3   LTAHFIDSYWVLHKKNLNFCQVA-NHKGVTIGKLIESCLLEWGI-DKVFSITVD-NASLN 62
           L A FIDS W LH++ L             + + I  CL +W + DK+F+IT++ + S +
Sbjct: 221 LAAQFIDSEWRLHRRVLKVMMAPWPQSENAVSRAIIKCLSDWNMQDKLFTITLEHDCSSH 280

Query: 63  DGEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVIS 122
           D   + ++  L     L+L+G+   +RC A+++N + +  L  +H++I  +R +++++ +
Sbjct: 281 DIYSANLRNHLSGDNILMLKGQTFAVRCYANILNAVAHGVLASVHNVIYLIRESIKFIKA 340

Query: 123 SSKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQD 182
                 KF     + KI      CLDV + WN TYLML  AL + + F +LE     Y D
Sbjct: 341 DDAHENKFAEIAVELKITSNNSLCLDVTSEWNTTYLMLLAALDYRQVFTLLE----SYYD 400

Query: 183 CFAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVT-NLISG-SLYVTVNSFF 232
            +            PS  +WK VE    F K+ Y  T N++S    + T N FF
Sbjct: 401 NYGT---------APSTEDWKKVEAACGFLKLLYAFTLNIMSAEGNHQTANMFF 441

[Close]

BLAST of Cmc05g0135531 vs. ExPASy TrEMBL
Match: A0A5D3C9B8 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001200 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. ExPASy TrEMBL
Match: A0A5A7VIJ7 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00070 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. ExPASy TrEMBL
Match: A0A5D3DTE1 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002370 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. ExPASy TrEMBL
Match: A0A5A7U8W5 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00790 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 387 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 446

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 447 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 506

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 507 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 566

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 567 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 617

[Close]

BLAST of Cmc05g0135531 vs. ExPASy TrEMBL
Match: A0A5D3D2K8 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00240 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.4e-111
Identity = 206/231 (89.18%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MVLTAHFIDSYWVLHKKNLNFCQVANHKGVTIGKLIESCLLEWGIDKVFSITVDNASLND 60
           MVLTAHFIDS WVLHKK LNFCQVANHKG TIGKLIESCLLEWGIDKVFSITVDNAS ND
Sbjct: 219 MVLTAHFIDSDWVLHKKILNFCQVANHKGETIGKLIESCLLEWGIDKVFSITVDNASSND 278

Query: 61  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 120
           G ISYI KRLRS KTLILEGELL MRCCAHVINLIVNEGLKEMHD IA VRNAVRYV SS
Sbjct: 279 GAISYIMKRLRSWKTLILEGELLHMRCCAHVINLIVNEGLKEMHDSIACVRNAVRYVRSS 338

Query: 121 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 180
            KRL KFKTCVEQ+KIDCKAL CLDVPTRWN TYLMLEHALKFEKAFQILEEEELDYQD 
Sbjct: 339 PKRLIKFKTCVEQEKIDCKALVCLDVPTRWNSTYLMLEHALKFEKAFQILEEEELDYQDY 398

Query: 181 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
           FA+DEHGKK+I PPSN +WKNVEVFVMF KVFYNVTN ISGSLYVT NSFF
Sbjct: 399 FAEDEHGKKKIGPPSNYDWKNVEVFVMFLKVFYNVTNKISGSLYVTANSFF 449

[Close]

BLAST of Cmc05g0135531 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-22
Identity = 62/231 (26.84%), Postives = 119/231 (51.52%), Query Frame = 0


Query: 3   LTAHFIDSYWVLHKKNLNFCQVANHKG-VTIGKLIESCLLEWGID-KVFSITVDNASLND 62
           +TAH+IDS W + KK LN    +  +    +   + +C+ EWG++ K+F++T ++ + N 
Sbjct: 251 ITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASNS 310

Query: 63  GEISYIKKRLRSKKTLILEGELLRMRCCAHVINLIVNEGLKEMHDLIASVRNAVRYVISS 122
             +  I+ +L  K   IL+G+L+   C A     +  + L++  D+I ++R++V++V +S
Sbjct: 311 A-VENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTS 370

Query: 123 SKRLTKFKTCVEQQKIDCKALFCLDVPTRWNFTYLMLEHALKFEKAFQILEEEELDYQDC 182
                +F    EQ ++  + +  LD  T+WN TY+ML  A + ++ F  L+  + DY+  
Sbjct: 371 ESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKK- 430

Query: 183 FAKDEHGKKRIWPPSNSNWKNVEVFVMFFKVFYNVTNLISGSLYVTVNSFF 232
                       PPS  +W++VE    F K  +   + +  +   +  +FF
Sbjct: 431 ------------PPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFF 467

The following BLAST results are available for this feature:

BLAST of Cmc05g0135531 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067548.1	9.1e-111	89.18	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
TYK16769.1	9.1e-111	89.18	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
KAA0050616.1	9.1e-111	89.18	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
KAA0065439.1	9.1e-111	89.18	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
TYK26605.1	9.1e-111	89.18	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]

BLAST of Cmc05g0135531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVI0	2.1e-30	32.76	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	1.8e-29	32.33	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.1e-26	30.47	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
P08770	8.7e-24	28.94	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
Q0JMB2	1.3e-22	30.34	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of Cmc05g0135531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9B8	4.4e-111	89.18	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5A7VIJ7	4.4e-111	89.18	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5D3DTE1	4.4e-111	89.18	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5A7U8W5	4.4e-111	89.18	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5D3D2K8	4.4e-111	89.18	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]

BLAST of Cmc05g0135531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.7e-22	26.84	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23272:SF133	SUBFAMILY NOT NAMED	coord: 2..183
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 2..183
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0135531.1	Cmc05g0135531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity