Cmc05g0134931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0134931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr05: 16739683 .. 16740519 (+)
RNA-Seq Expression	Cmc05g0134931
Synteny	Cmc05g0134931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGCTTTGTCTCAAGCATCGTATATTAACAAGATAGTTGTTAAATATTCAATGCAAAAATCCAAGAGAGGCTTACTACATTTCAGACATGGAGTTACTTTGCCTAAGGAACAGTGTCCTAAGACACCTCAAGAGGTTCAGGAAATGAGACATATCCCCTATGCATCGGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAAACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCTAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGATCGAGGGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTTTTACAGGATACACAGACTCTGATTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGCAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACCATGGAGGCAGAGTATGTCGCAGCTTGTGAAGATGTCAAAGAGCCTATTTGGCTTAGAAAATTCTTGACTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGAGGCTGTGGCTAATTCAAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATGGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCATTTACAAAGCCCTTCACGGCTAAGGTGTTTGAGGATCACCTAGAAAGTCTAGGTCTACGTGACATATGCCACATTTAA

mRNA sequence

ATGCTAGCTTTGTCTCAAGCATCGTATATTAACAAGATAGTTGTTAAATATTCAATGCAAAAATCCAAGAGAGGCTTACTACATTTCAGACATGGAGTTACTTTGCCTAAGGAACAGTGTCCTAAGACACCTCAAGAGGTTCAGGAAATGAGACATATCCCCTATGCATCGGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAAACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCTAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGATCGAGGGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTTTTACAGGATACACAGACTCTGATTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGCAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACCATGGAGGCAGAGTATGTCGCAGCTTGTGAAGATGTCAAAGAGCCTATTTGGCTTAGAAAATTCTTGACTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGAGGCTGTGGCTAATTCAAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATGGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCATTTACAAAGCCCTTCACGGCTAAGGTGTTTGAGGATCACCTAGAAAGTCTAGGTCTACGTGACATATGCCACATTTAA

Coding sequence (CDS)

ATGCTAGCTTTGTCTCAAGCATCGTATATTAACAAGATAGTTGTTAAATATTCAATGCAAAAATCCAAGAGAGGCTTACTACATTTCAGACATGGAGTTACTTTGCCTAAGGAACAGTGTCCTAAGACACCTCAAGAGGTTCAGGAAATGAGACATATCCCCTATGCATCGGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAAACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCTAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGATCGAGGGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTTTTACAGGATACACAGACTCTGATTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGCAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACCATGGAGGCAGAGTATGTCGCAGCTTGTGAAGATGTCAAAGAGCCTATTTGGCTTAGAAAATTCTTGACTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGAGGCTGTGGCTAATTCAAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATGGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCATTTACAAAGCCCTTCACGGCTAAGGTGTTTGAGGATCACCTAGAAAGTCTAGGTCTACGTGACATATGCCACATTTAA

Protein sequence

MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVGSLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFTGYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIWLRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI

Homology

[Close]

BLAST of Cmc05g0134931 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 850  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 909

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 910  SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 969

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 970  GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1029

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1030 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1089

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1090 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1127

[Close]

BLAST of Cmc05g0134931 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 1064 MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 1123

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 1124 SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1183

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1184 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1243

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1244 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1303

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1304 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1341

[Close]

BLAST of Cmc05g0134931 vs. NCBI nr
Match: TYK19524.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
           MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 23  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 82

Query: 61  SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
           SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 83  SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 142

Query: 121 GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
           GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 143 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 202

Query: 181 LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
           LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 203 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 262

Query: 241 VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
           VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 263 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300

[Close]

BLAST of Cmc05g0134931 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 1065 MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 1124

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 1125 SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1184

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1185 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1244

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1245 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1304

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1305 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

[Close]

BLAST of Cmc05g0134931 vs. NCBI nr
Match: KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 924  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 983

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 984  SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1043

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1044 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1103

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1104 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1163

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1164 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1201

[Close]

BLAST of Cmc05g0134931 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 119/271 (43.91%), Postives = 167/271 (61.62%), Query Frame = 0


Query: 2    LALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVGS 61
            L LSQ  YI +++ +++M+ +K         + L K+ CP T +E   M  +PY+SAVGS
Sbjct: 1058 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1117

Query: 62   LMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFTG 121
            LMYAM+CT+PDI +AVG+VSR+  N G  HW AVK IL+YLR +    L +G  D I  G
Sbjct: 1118 LMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKG 1177

Query: 122  YTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIWL 181
            YTD+D   D D+RKS++G +FT +GGA  W+S  Q C+A ST EAEY+AA E  KE IWL
Sbjct: 1178 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWL 1237

Query: 182  RKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVIV 241
            ++FL +L +     K   +YCD+  A+  S+    H R KH++ +YH IRE+V    + V
Sbjct: 1238 KRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKV 1297

Query: 242  TQIASTHNVADPFTKPFTAKVFEDHLESLGL 273
             +I++  N AD  TK      FE   E +G+
Sbjct: 1298 LKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc05g0134931 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 157.1 bits (396), Expect = 2.8e-37
Identity = 98/277 (35.38%), Postives = 150/277 (54.15%), Query Frame = 0


Query: 4    LSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEV---QEMRHIPYASAVG 63
            LSQ++Y+ KI+ K++M+          + V+ P     K   E+    E  + P  S +G
Sbjct: 1137 LSQSAYVKKILSKFNMENC--------NAVSTPLPS--KINYELLNSDEDCNTPCRSLIG 1196

Query: 64   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIF- 123
             LMY MLCT+PD+  AV I+SRY S      W  +K +L+YL+ + D  L++  K+L F 
Sbjct: 1197 CLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFE 1256

Query: 124  ---TGYTDSDFQTDRDSRKSTSGSVFTL-NGGAAVWRSIKQGCIADSTMEAEYVAACEDV 183
                GY DSD+      RKST+G +F + +     W + +Q  +A S+ EAEY+A  E V
Sbjct: 1257 NKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAV 1316

Query: 184  KEPIWLRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVH 243
            +E +WL+  LT + +   +  PI +Y DN   ++ +  P  HKR KH++ KYH  RE V 
Sbjct: 1317 REALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQ 1376

Query: 244  RGDVIVTQIASTHNVADPFTKPFTAKVFEDHLESLGL 273
               + +  I + + +AD FTKP  A  F +  + LGL
Sbjct: 1377 NNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc05g0134931 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-26
Identity = 60/135 (44.44%), Postives = 93/135 (68.89%), Query Frame = 0


Query: 50  MRHIPYASAVGSLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYM 109
           M+++PY SAVG++MY M+ T+PD+  AVG++S++ S+    HW A+K +L+YL+ ++ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 110 LVY---GSKDLIFTGYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEA 169
           L +   G+  L+  GY+D+D+  D +SR+STSG +F LNGG   WRS KQ  +A S+ E 
Sbjct: 61  LEFTRAGTAKLV--GYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTED 120

Query: 170 EYVAACEDVKEPIWL 182
           EY+A  E  +E +WL
Sbjct: 121 EYMALSEATQEAVWL 133

[Close]

BLAST of Cmc05g0134931 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-26
Identity = 82/272 (30.15%), Postives = 124/272 (45.59%), Query Frame = 0


Query: 2    LALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVGS 61
            L LSQ  Y   ++ + +M  +K           L      K P   +      Y   VGS
Sbjct: 1181 LHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGS 1240

Query: 62   LMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDY-MLVYGSKDLIFT 121
            L Y +  T+PD+ YAV  +S+Y       HW A+K +L+YL  + D+ + +     L   
Sbjct: 1241 LQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLH 1300

Query: 122  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 181
             Y+D+D+  D D   ST+G +  L      W S KQ  +  S+ EAEY +      E  W
Sbjct: 1301 AYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQW 1360

Query: 182  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 241
            +   LT+L +   +S P  +YCDN  A      P  H R KH+   YH IR  V  G + 
Sbjct: 1361 ICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALR 1420

Query: 242  VTQIASTHNVADPFTKPFTAKVFEDHLESLGL 273
            V  +++   +AD  TKP +   F++    +G+
Sbjct: 1421 VVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443

[Close]

BLAST of Cmc05g0134931 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.3e-25
Identity = 84/274 (30.66%), Postives = 128/274 (46.72%), Query Frame = 0


Query: 2    LALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIP--YASAV 61
            L LSQ  YI  ++ + +M  +K         VT P    PK           P  Y   V
Sbjct: 1198 LHLSQRRYILDLLARTNMITAK--------PVTTPMAPSPKLSLYSGTKLTDPTEYRGIV 1257

Query: 62   GSLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDY-MLVYGSKDLI 121
            GSL Y +  T+PDI YAV  +S++       H  A+K IL+YL  + ++ + +     L 
Sbjct: 1258 GSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLS 1317

Query: 122  FTGYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEP 181
               Y+D+D+  D+D   ST+G +  L      W S KQ  +  S+ EAEY +      E 
Sbjct: 1318 LHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEM 1377

Query: 182  IWLRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGD 241
             W+   LT+L +   +++P  +YCDN  A      P  H R KH+   YH IR  V  G 
Sbjct: 1378 QWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGA 1437

Query: 242  VIVTQIASTHNVADPFTKPFTAKVFEDHLESLGL 273
            + V  +++   +AD  TKP +   F++    +G+
Sbjct: 1438 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Cmc05g0134931 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 1065 MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 1124

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 1125 SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1184

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1185 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1244

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1245 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1304

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1305 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

[Close]

BLAST of Cmc05g0134931 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 1065 MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 1124

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 1125 SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1184

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1185 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1244

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1245 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1304

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1305 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

[Close]

BLAST of Cmc05g0134931 vs. ExPASy TrEMBL
Match: A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 850  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 909

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 910  SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 969

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 970  GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1029

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1030 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1089

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1090 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1127

[Close]

BLAST of Cmc05g0134931 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 1064 MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 1123

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 1124 SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1183

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1184 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1243

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1244 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1303

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1304 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1341

[Close]

BLAST of Cmc05g0134931 vs. ExPASy TrEMBL
Match: A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1    MLALSQASYINKIVVKYSMQKSKRGLLHFRHGVTLPKEQCPKTPQEVQEMRHIPYASAVG 60
            MLALSQASYI+KIVVKYSMQ SKRGLL FRHGVTL KEQCPKTPQ+V+EMRHIPYASAVG
Sbjct: 924  MLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVG 983

Query: 61   SLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGSKDLIFT 120
            SLMYAMLCT+PDICYAVGIVSRYQSN GLAHWTAVKTILKYLRR+RDY LVYGSKDLI T
Sbjct: 984  SLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILT 1043

Query: 121  GYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACEDVKEPIW 180
            GYTDSDFQTDRDSRKSTSGSVFTLNGGA VWRSIKQGCIADSTMEAEYVAACE  KE +W
Sbjct: 1044 GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1103

Query: 181  LRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIREIVHRGDVI 240
            LR FL DLEVVPNMSKPITLYCDNS AVANSREPRSHKRGKH+ERKYHLIREIVHRGDVI
Sbjct: 1104 LRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI 1163

Query: 241  VTQIASTHNVADPFTKPFTAKVFEDHLESLGLRDICHI 279
            VTQIASTHNVADPFTKP TAKVFE HLESLGLRD+ H+
Sbjct: 1164 VTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1201

[Close]

BLAST of Cmc05g0134931 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-22
Identity = 62/179 (34.64%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 55  YASAVGSLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDYMLVYGS 114
           Y   +G LMY  + T+ DI +AV  +S++     LAH  AV  IL Y++ +    L Y S
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 437

Query: 115 K-DLIFTGYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACE 174
           + ++    ++D+ FQ+ +D+R+ST+G    L      W+S KQ  ++ S+ EAEY A   
Sbjct: 438 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 497

Query: 175 DVKEPIWLRKFLTDLEVVPNMSKPITLYCDNSEAVANSREPRSHKRGKHMERKYHLIRE 233
              E +WL +F  +L++   +SKP  L+CDN+ A+  +     H+R KH+E   H +RE
Sbjct: 498 ATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc05g0134931 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 38/127 (29.92%), Postives = 64/127 (50.39%), Query Frame = 0


Query: 55  YASAVGSLMYAMLCTKPDICYAVGIVSRYQSNLGLAHWTAVKTILKYLRRSRDY-MLVYG 114
           + S VG+L Y  L T+PDI YAV IV +      LA +  +K +L+Y++ +  + + ++ 
Sbjct: 100 FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 115 SKDLIFTGYTDSDFQTDRDSRKSTSGSVFTLNGGAAVWRSIKQGCIADSTMEAEYVAACE 174
           +  L    + DSD+     +R+ST+G    L      W + +Q  ++ S+ E EY A   
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALAL 219

Query: 175 DVKEPIW 181
              E  W
Sbjct: 220 TAAELTW 225

The following BLAST results are available for this feature:

BLAST of Cmc05g0134931 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97618.1	2.0e-141	91.01	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	2.0e-141	91.01	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK19524.1	2.0e-141	91.01	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	2.0e-141	91.01	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0026233.1	2.0e-141	91.01	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0134931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.2e-56	43.91	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.8e-37	35.38	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	2.2e-26	44.44	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q9ZT94	8.5e-26	30.15	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	9.3e-25	30.66	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc05g0134931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	9.7e-142	91.01	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	9.7e-142	91.01	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5D3BHG7	9.7e-142	91.01	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015...	[more]
A0A5A7TZD7	9.7e-142	91.01	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7SNP8	9.7e-142	91.01	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216...	[more]

BLAST of Cmc05g0134931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.5e-22	34.64	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.6e-08	29.92	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 136..264
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 136..264
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 120..261 e-value: 2.01656E-60 score: 186.135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0134931.1	Cmc05g0134931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding