Cmc05g0134681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0134681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	photosystem I reaction center subunit IV, chloroplastic-like
Location	CMiso1.1chr05: 16308194 .. 16309367 (+)
RNA-Seq Expression	Cmc05g0134681
Synteny	Cmc05g0134681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTACCCATAAAACATCTGATTCTTTCTCCCCCAATATGTGGTTATCATTATTTCATTTGGGTTTATCTCTTCATCTTCCAAAGCATTAACATATTGTTGATTCATCAGTTAAAGAGCATAGAGCAAAAAGGAAATTGAAAGACCAAAGGGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGTGTGTGACAACACTTCTTTTTCCTTTTTATTATTAGTTCATGGAGATTGCCGTAGAATTCTATTGATGCTTGATTACTTGAACAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGTTAGACCCTTTAATTTTTATTTATTCAAGATTTTTGTTTCATATTCATTCCTTTTAGAACGATAAATCAAGTGGCTAACTATGTCCTGTTTAAGGGTTAATTAGGTTGCTGTATTTAATTAGGGATTGAGATTGTGCATGTTTGATGTTACAACTAATATAATGTAGATATGTACTAATGGTTAATATATGTACGAATCAAACTTTGCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTTTTTTAGTTTGCTTGTGTATTTTTGAGTTAAAAATGTTTGTATAATACTCCAATTTCAATCTATTTCTTCCCTCTCTCCATGACTGTGTGTTTACTGATTCTAAACACAATTTCTCTTCCCTTTTGCTTATATGGTTCACAGCAATCAGAATTTTCCAGTGCTTCTAATTTTAGGAGATTAAAATGGTTTTACTTTCACAACATTCTGCTTCTACAGTGTACAAGCAAGGGAAACCAATTGTGGAAGTTTGAATTGATCTCTTTTTTTCTTTTTTGG

mRNA sequence

TATTACCCATAAAACATCTGATTCTTTCTCCCCCAATATGTGGTTATCATTATTTCATTTGGGTTTATCTCTTCATCTTCCAAAGCATTAACATATTGTTGATTCATCAGTTAAAGAGCATAGAGCAAAAAGGAAATTGAAAGACCAAAGGGCAATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTTTTTTAGTTTGCTTGTGTATTTTTGAGTTAAAAATGTTTGTATAATACTCCAATTTCAATCTATTTCTTCCCTCTCTCCATGACTGTGTGTTTACTGATTCTAAACACAATTTCTCTTCCCTTTTGCTTATATGGTTCACAGCAATCAGAATTTTCCAGTGCTTCTAATTTTAGGAGATTAAAATGGTTTTACTTTCACAACATTCTGCTTCTACAGTGTACAAGCAAGGGAAACCAATTGTGGAAGTTTGAATTGATCTCTTTTTTTCTTTTTTGG

Coding sequence (CDS)

ATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTCATCCCTTCTTCAACTACCATTTCTTCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCCCAAGAATTCCAATTCTATTTCAAGATCTTCTCGATTGGTTATCCGTGCCGCCGCCTCCGACGAGGCTGCTCCCCCACCCCCTGCTGCCGCCCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCCAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAGGATCCCAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA

Protein sequence

MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Homology

[Close]

BLAST of Cmc05g0134681 vs. NCBI nr
Match: XP_008441802.1 (PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 5.5e-66
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA
Sbjct: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120
           PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV
Sbjct: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120

Query: 121 VVRFNKVNYASVSTNNYALDEIEEVA 147
           VVRFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 VVRFNKVNYASVSTNNYALDEIEEVA 146

[Close]

BLAST of Cmc05g0134681 vs. NCBI nr
Match: XP_038889433.1 (photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP
Sbjct: 1   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122
           PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 123 RFNKVNYASVSTNNYALDEIEEVA 147
           RF+KVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFSKVNYASVSTNNYALDEIEEVA 144

[Close]

BLAST of Cmc05g0134681 vs. NCBI nr
Match: XP_004152807.2 (photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 139/146 (95.21%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAA
Sbjct: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAA 60

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120
           PPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV
Sbjct: 61  PPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120

Query: 121 VVRFNKVNYASVSTNNYALDEIEEVA 147
           VVRFNKVNYASVSTNNYALDEI+EVA
Sbjct: 121 VVRFNKVNYASVSTNNYALDEIQEVA 144

[Close]

BLAST of Cmc05g0134681 vs. NCBI nr
Match: KAE8651724.1 (hypothetical protein Csa_006032 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 139/146 (95.21%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAA
Sbjct: 89  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAA 148

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120
           PPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV
Sbjct: 149 PPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 208

Query: 121 VVRFNKVNYASVSTNNYALDEIEEVA 147
           VVRFNKVNYASVSTNNYALDEI+EVA
Sbjct: 209 VVRFNKVNYASVSTNNYALDEIQEVA 232

[Close]

BLAST of Cmc05g0134681 vs. NCBI nr
Match: KAA0061399.1 (photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 2.9e-59
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 15  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 74
           VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 75  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 134
           EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 129

Query: 135 NNYALDEIEEVA 147
           NNYALDEIEEVA
Sbjct: 130 NNYALDEIEEVA 141

[Close]

BLAST of Cmc05g0134681 vs. ExPASy Swiss-Prot
Match: Q41229 (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEB PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.4e-33
Identity = 87/147 (59.18%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRAAASDEAAP 62
           MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RAA  +EAAP
Sbjct: 1   MASSSMASAASGFMVATPNIATSNTAPRTSMLFFSSSKNNTTTNFPRLVVRAA--EEAAP 60

Query: 63  PPPAAAPAAATAEEP---KPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRY 122
           P   AA A A  E P     KP PIGPKRG KV++LRKESYWYK VGSVV VDQDPNTRY
Sbjct: 61  P---AATATAEGEAPPAKAAKPPPIGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRY 120

Query: 123 PVVVRFNKVNYASVSTNNYALDEIEEV 146
           PVVVRFNKVNYA+VSTNNYALDE+EEV
Sbjct: 121 PVVVRFNKVNYANVSTNNYALDEVEEV 142

[Close]

BLAST of Cmc05g0134681 vs. ExPASy Swiss-Prot
Match: Q41228 (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEA PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-31
Identity = 84/143 (58.74%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RAA  +EAAPP
Sbjct: 1   MASCNMASAASNFLVATPNVASNTNTSRTTMLFF-SSKNYGSTAPRLVVRAA--EEAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122
             AA    A A     KP PIGPKRG KV+ILRKESYWYK  GSVV  DQDPNTRYPVVV
Sbjct: 61  AAAATAEPAEAPVKAAKPPPIGPKRGTKVRILRKESYWYKGTGSVVACDQDPNTRYPVVV 120

Query: 123 RFNKVNYASVSTNNYALDEIEEV 146
           RFNKVNYA+VSTNNYALDEIEEV
Sbjct: 121 RFNKVNYANVSTNNYALDEIEEV 140

[Close]

BLAST of Cmc05g0134681 vs. ExPASy Swiss-Prot
Match: Q9S831 (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.8e-31
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 16  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAP 75
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 76  AAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVN 135
             ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV VDQDP TRYPVVVRF KVN
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVN 130

Query: 136 YASVSTNNYALDEIEEVA 147
           YA++STNNYALDE+EEVA
Sbjct: 131 YANISTNNYALDEVEEVA 142

[Close]

BLAST of Cmc05g0134681 vs. ExPASy Swiss-Prot
Match: P12354 (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAE-1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 81/123 (65.85%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 24  SSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPI 83
           SS + RL      P  + S  RS+RLV+RAA  +EAA  P AA+P    A +   KP PI
Sbjct: 6   SSVAVRLGLTQVLPNKNFSSPRSTRLVVRAA--EEAAAAPAAASP-EGEAPKAAAKPPPI 65

Query: 84  GPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIE 143
           GPKRG+KV+I+RKESYWYK VGSVV VDQDP TRYPVVVRFNKVNYA+VSTNNYALDEI+
Sbjct: 66  GPKRGSKVRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQ 125

Query: 144 EVA 147
           EVA
Sbjct: 126 EVA 125

[Close]

BLAST of Cmc05g0134681 vs. ExPASy Swiss-Prot
Match: P13194 (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAE PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27
Identity = 81/150 (54.00%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MA++N++   S  ++ +     ++    S ++F P N   +    +LV RA     AAP 
Sbjct: 1   MASTNMASATSRFMLAAGIPSGANGGVSSRVSFLPSNRLGL----KLVARAEEPTAAAPA 60

Query: 63  PPAAA------PAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNT 122
            PA A       A AT E  K KP P GPKRG KVKILR+ESYWY   GSVVTVDQDPNT
Sbjct: 61  EPAPAADEKPEAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPNT 120

Query: 123 RYPVVVRFNKVNYASVSTNNYALDEIEEVA 147
           RYPVVVRF KVNYA VSTNNYALDEI+EVA
Sbjct: 121 RYPVVVRFAKVNYAGVSTNNYALDEIKEVA 146

[Close]

BLAST of Cmc05g0134681 vs. ExPASy TrEMBL
Match: A0A1S3B3T3 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103485855 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA
Sbjct: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120
           PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV
Sbjct: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120

Query: 121 VVRFNKVNYASVSTNNYALDEIEEVA 147
           VVRFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 VVRFNKVNYASVSTNNYALDEIEEVA 146

[Close]

BLAST of Cmc05g0134681 vs. ExPASy TrEMBL
Match: A0A0A0LJQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 139/146 (95.21%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAA 60
           MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAA
Sbjct: 77  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAA 136

Query: 61  PPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 120
           PPP A AP AAT EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV
Sbjct: 137 PPPAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPV 196

Query: 121 VVRFNKVNYASVSTNNYALDEIEEVA 147
           VVRFNKVNYASVSTNNYALDEI+EVA
Sbjct: 197 VVRFNKVNYASVSTNNYALDEIQEVA 220

[Close]

BLAST of Cmc05g0134681 vs. ExPASy TrEMBL
Match: A0A5A7V6V9 (Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00230 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 15  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 74
           VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 75  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 134
           EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 129

Query: 135 NNYALDEIEEVA 147
           NNYALDEIEEVA
Sbjct: 130 NNYALDEIEEVA 141

[Close]

BLAST of Cmc05g0134681 vs. ExPASy TrEMBL
Match: A0A6J1FC09 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444038 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54
Identity = 127/144 (88.19%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MAASNLSCIASGV+IPSSTTI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSTTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122
           P AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PAAAATADAPAEAPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 123 RFNKVNYASVSTNNYALDEIEEVA 147
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFNKVNYASVSTNNYALDEIEEVA 143

[Close]

BLAST of Cmc05g0134681 vs. ExPASy TrEMBL
Match: A0A6J1HLT8 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465716 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 126/144 (87.50%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62
           MAASNLSCIASGV+IPSS TI SSSSR SS+AFFPKNS SISRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSPTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122
           P AAA A A AE PKPKPAPIGPKRG KVKILR+ESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PAAAATADAPAEVPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 123 RFNKVNYASVSTNNYALDEIEEVA 147
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFNKVNYASVSTNNYALDEIEEVA 143

[Close]

BLAST of Cmc05g0134681 vs. TAIR 10
Match: AT4G28750.1 (Photosystem I reaction centre subunit IV / PsaE protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.6e-32
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 16  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA------AASDEAAPPPPAAAP 75
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 76  AAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVN 135
             ATA   KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV VDQDP TRYPVVVRF KVN
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVN 130

Query: 136 YASVSTNNYALDEIEEVA 147
           YA++STNNYALDE+EEVA
Sbjct: 131 YANISTNNYALDEVEEVA 142

[Close]

BLAST of Cmc05g0134681 vs. TAIR 10
Match: AT2G20260.1 (photosystem I subunit E-2 )

HSP 1 Score: 122.1 bits (305), Expect = 3.7e-28
Identity = 81/148 (54.73%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 8   LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRAA-------ASD 67
           ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS 
Sbjct: 3   MTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMR----SFGSRLVVRAAEDTPPATASS 62

Query: 68  EAAPPPPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTR 127
           +++    AAAPA   A   K KP PIGPKRG+KVKILRKESYWYK+VGSVV VDQDP TR
Sbjct: 63  DSSSTTAAAAPAKVPA--AKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTR 122

Query: 128 YPVVVRFNKVNYASVSTNNYALDEIEEV 146
           YPVVVRF KVNYA++STNNYALDE+EEV
Sbjct: 123 YPVVVRFAKVNYANISTNNYALDEVEEV 144

The following BLAST results are available for this feature:

BLAST of Cmc05g0134681 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441802.1	5.5e-66	100.00	PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis...	[more]
XP_038889433.1	1.8e-64	99.31	photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]	[more]
XP_004152807.2	4.1e-61	95.21	photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]	[more]
KAE8651724.1	4.1e-61	95.21	hypothetical protein Csa_006032 [Cucumis sativus]	[more]
KAA0061399.1	2.9e-59	100.00	photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 ...	[more]

BLAST of Cmc05g0134681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41229	8.4e-33	59.18	Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestri...	[more]
Q41228	2.1e-31	58.74	Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestri...	[more]
Q9S831	7.8e-31	60.87	Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thalian...	[more]
P12354	1.3e-30	65.85	Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=...	[more]
P13194	1.4e-27	54.00	Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=45...	[more]

BLAST of Cmc05g0134681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3T3	2.7e-66	100.00	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0LJQ1	2.0e-61	95.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1	[more]
A0A5A7V6V9	1.4e-59	100.00	Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1FC09	2.3e-54	88.19	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1HLT8	1.5e-53	87.50	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima...	[more]

BLAST of Cmc05g0134681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28750.1	5.6e-32	60.87	Photosystem I reaction centre subunit IV / PsaE protein	[more]
AT2G20260.1	3.7e-28	54.73	photosystem I subunit E-2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PFAM	PF02427	PSI_PsaE	coord: 86..145 e-value: 1.0E-30 score: 105.2
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PANTHER	PTHR34549	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED	coord: 3..146
None	No IPR available	GENE3D	2.30.30.50		coord: 79..146 e-value: 1.3E-36 score: 125.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..87
None	No IPR available	PANTHER	PTHR34549:SF7	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A	coord: 3..146
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 85..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0134681.1	Cmc05g0134681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I