Cmc05g0134231 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAAAATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGTTCAACAGGAAATCAAACTTGCTCGGCATTACACATTTCTACTTAACAGTATGCACCATCAAAAGGCAATAAGACTTCACTCTCAGCTCAGATCACGAAGAAACAAACTTTTCTTTCTTCCTCATTTGATCTTGTTTACAATTGTAATTGACATGGGCTATGATGCAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACCTGATGCCCTGTGGTTGTTTGATTAAGAAGAAGCACTTTTTTCCCCTATCAAAGAAGAATAAGCACTTCGATGAGCTGCCAACTTGCCAGCAGACTTACATATTGTTGATTTCTTCTACCTTTTGATGCATCAATTCTATGCGCATGGAAAGAAATGAAGGCTTACTGGACACTTTTATCAAAAGGTGAGATATTTCCTTTTATTAGTACTCCCGAGGGTGAATTGAAGCATTCTGGTGTGATGTTTGTTTCATTTCCAATTAATATAAACTTTAATAATGTGATAAGGAGCTGCTGAGTTTTGATGGAAAGCACTTTTACTTTACTTTATTACCATTGTCCAGAAATAAATGTTACATCTTGAAAGACATTGAGTATCAGTATGGAGGTTTTTAAGAAGTTCTTTTTCCATTAGAAGTATTGGAAGTATTTGCACCTTTCTATAAGTCTTATAAAGTATTTAGTCTCGGTGATGCTTTGGGGATTGCACAGCACCATGATGCAGTGACTGGTACTGCTAAGCAACATACTACAAATGACTTTGTGTCTCTTTTTTTTTTTTCCTTTGAAAGGTCATATATGGTGGACTTATGGTCGCAAGTGGAGGAGAAGAATTCACAATCCGGCTACTTCTTAAAGTATGTTGTATGCGTC TTTGAAAATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACCTGATGCCCTGTGGTTGTTTGATTAAGAAGAAGCACTTTTTTCCCCTATCAAAGAAGAATAAGCACTTCGATGAGCTGCCAACTTGCCAGCAGACTTACATATTGTTGATTTCTTCTACCTTTTGATGCATCAATTCTATGCGCATGGAAAGAAATGAAGGCTTACTGGACACTTTTATCAAAAGGTCATATATGGTGGACTTATGGTCGCAAGTGGAGGAGAAGAATTCACAATCCGGCTACTTCTTAAAGTATGTTGTATGCGTC ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTGAGGGATAAATCCATACTTTCAAAACCCCACTTTGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAAACCTGA MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKLRDKSILSKPHFDLLFSYNIAVDRSDEMKRILGKSAASVGLSLPEVYQT Homology
BLAST of Cmc05g0134231 vs. NCBI nr
Match: XP_004144434.1 (uncharacterized protein LOC101204721 [Cucumis sativus] >XP_031739411.1 uncharacterized protein LOC101204721 [Cucumis sativus] >KGN58453.1 hypothetical protein Csa_001238 [Cucumis sativus]) HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32 Identity = 82/109 (75.23%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Cmc05g0134231 vs. NCBI nr
Match: KAA0039302.1 (Complex1_LYR domain-containing protein [Cucumis melo var. makuwa] >TYK00486.1 Complex1_LYR domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 148.3 bits (373), Expect = 3.1e-32 Identity = 82/102 (80.39%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of Cmc05g0134231 vs. NCBI nr
Match: XP_022933120.1 (uncharacterized protein LOC111439884 [Cucurbita moschata] >XP_022933121.1 uncharacterized protein LOC111439884 [Cucurbita moschata]) HSP 1 Score: 143.7 bits (361), Expect = 7.7e-31 Identity = 79/109 (72.48%), Postives = 82/109 (75.23%), Query Frame = 0
BLAST of Cmc05g0134231 vs. NCBI nr
Match: XP_038889144.1 (uncharacterized protein LOC120079034 [Benincasa hispida]) HSP 1 Score: 141.7 bits (356), Expect = 2.9e-30 Identity = 79/109 (72.48%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Cmc05g0134231 vs. NCBI nr
Match: XP_022967927.1 (uncharacterized protein LOC111467294 [Cucurbita maxima] >XP_022967928.1 uncharacterized protein LOC111467294 [Cucurbita maxima] >KAG6603158.1 hypothetical protein SDJN03_03767, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141.7 bits (356), Expect = 2.9e-30 Identity = 78/109 (71.56%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Cmc05g0134231 vs. ExPASy TrEMBL
Match: A0A0A0L9E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645910 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.8e-33 Identity = 82/109 (75.23%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Cmc05g0134231 vs. ExPASy TrEMBL
Match: A0A5D3BQE5 (Complex1_LYR domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00940 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32 Identity = 82/102 (80.39%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of Cmc05g0134231 vs. ExPASy TrEMBL
Match: A0A6J1EY92 (uncharacterized protein LOC111439884 OS=Cucurbita moschata OX=3662 GN=LOC111439884 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.7e-31 Identity = 79/109 (72.48%), Postives = 82/109 (75.23%), Query Frame = 0
BLAST of Cmc05g0134231 vs. ExPASy TrEMBL
Match: A0A6J1HS51 (uncharacterized protein LOC111467294 OS=Cucurbita maxima OX=3661 GN=LOC111467294 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30 Identity = 78/109 (71.56%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Cmc05g0134231 vs. ExPASy TrEMBL
Match: A0A6J1C0V5 (uncharacterized protein LOC111006395 OS=Momordica charantia OX=3673 GN=LOC111006395 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27 Identity = 72/109 (66.06%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of Cmc05g0134231 vs. TAIR 10
Match: AT5G51960.1 (CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 5.4e-22 Identity = 54/102 (52.94%), Postives = 67/102 (65.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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