Cmc05g0134071 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0134071
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 15260783 .. 15263343 (+)
RNA-Seq Expression	Cmc05g0134071
Synteny	Cmc05g0134071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAACTGAAGGAACTGAAGATACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAAGAAGAAGGATGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCATTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACGCGTCTGGTTTTCTTATCGCTTCCGCTATGTATTTTGTCAGAATATTTTGACTTGTGATTCTGAACTGGTGACTTGATATTTTTATTTTTGTGGCTTTTTTAGTTATTTAAAATAGGGCCCGAAACAGTCTTTTGTAAGGTTTCTAATGTTTTAATGAATCGTAACTGGTCCGTTTTAAATTTTACGTTGAATGGTCGAGTTTTGGTATTTGGTAGTGACCTCAGCTTAGTCCGAAAAGTTGGGTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTTAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTGGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAATGATTACGATTGTGAGATACTGTATCATCCGGGTAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTAGGGGCAGTTACTATGCAGTTAGCCTAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCGGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGTTGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAGTCAGCGCACTTCGTTCCGGGTAAGTCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGCTTGCAGACTGCTATGGGCACGAGGTTAGATTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACCTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCCTGTACGGCAAAAGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGACGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGCTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCCCCATCACTCTCGACAGTCCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATATTGAACAACCCGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAA

mRNA sequence

ATGGCCCCCGCAGAACTGAAGGAACTGAAGATACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAAGAAGAAGGATGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCATTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACGCGTCTGGTTTTCTTATCGCTTCCGCTATGTATTTTCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTGGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAATGATTACGATTGTGAGATACTGTATCATCCGGGTAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCGGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGTTGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAGTCAGCGCACTTCGTTCCGGGTAAGTCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGCTTGCAGACTGCTATGGGCACGAGGTTAGATTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACCTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCCTGTACGGCAAAAGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGACGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGCTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCCCCATCACTCTCGACAGTCCATGATGTGTTTCATGTTTCTATGTTGAGGAAAGGTGAAGACGTTGAGGAATAA

Coding sequence (CDS)

ATGGCCCCCGCAGAACTGAAGGAACTGAAGATACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAAGAAGAAGGATGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACCGTAAAGAACAGATATCCATTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAATGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACGCGTCTGGTTTTCTTATCGCTTCCGCTATGTATTTTCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTGGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAATGATTACGATTGTGAGATACTGTATCATCCGGGTAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCGGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGTTGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATTTGGGTTGTGGTGGACAGACTTACTAAGTCAGCGCACTTCGTTCCGGGTAAGTCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGCTTGCAGACTGCTATGGGCACGAGGTTAGATTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACCTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCCTGTACGGCAAAAGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGACGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAAAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGCTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCCCCATCACTCTCGACAGTCCATGATGTGTTTCATGTTTCTATGTTGAGGAAAGGTGAAGACGTTGAGGAATAA

Protein sequence

MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWFSYRFRYVFSPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRKPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKSCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQTSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKGEDVEE

Homology

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BLAST of Cmc05g0134071 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 649/847 (76.62%), Postives = 658/847 (77.69%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYG   F        
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  --------------------------------------------------SYRFRYV--F 240
                                                               Y  R+V  F
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S              PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                    PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTK+Y+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLD
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLD 1239

Query: 661  FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
            FSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFE
Sbjct: 1240 FSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFE 1299

[Close]

BLAST of Cmc05g0134071 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1248.0 bits (3228), Expect = 0.0e+00
Identity = 648/847 (76.51%), Postives = 658/847 (77.69%), Query Frame = 0


Query: 1   MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
           YPLPRIDDLFDQLQGAT+FSKIDLRSG HQLRIKDEDVPKTAFRSRYG   F        
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 --------------------------------------------------SYRFRYV--F 240
                                                              Y  R+V  F
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S              PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
           KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                   PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTK+YQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
           KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 698 KSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 757

Query: 661 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
           FSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 758 FSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 817

[Close]

BLAST of Cmc05g0134071 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 649/847 (76.62%), Postives = 656/847 (77.45%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 570  MAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 629

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGY+QLRIKDEDVPKTAFRSRYG   F        
Sbjct: 630  YPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 689

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 690  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 749

Query: 181  --------------------------------------------------SYRFRYV--F 240
                                                               Y  R+V  F
Sbjct: 750  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 809

Query: 241  S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S              PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 810  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 869

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 870  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 929

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 930  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989

Query: 421  ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                    PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1049

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
            DGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEF
Sbjct: 1050 DGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1109

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1110 VSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1169

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 1170 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 1229

Query: 661  FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
            FSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1230 FSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1289

[Close]

BLAST of Cmc05g0134071 vs. NCBI nr
Match: KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1240.7 bits (3209), Expect = 0.0e+00
Identity = 642/814 (78.87%), Postives = 651/814 (79.98%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID RELNKVTVKNR
Sbjct: 574  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNR 633

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKD DVPKTAFRSRYG   F        
Sbjct: 634  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 693

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 694  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 753

Query: 181  --------------------------------------------------SYRFRYV--F 240
                                                               Y  R+V  F
Sbjct: 754  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 813

Query: 241  S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S              PFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSDA KKGL
Sbjct: 814  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGL 873

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 874  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 933

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK-------PTLRQRIID 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK       PTLRQRIID
Sbjct: 934  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIID 993

Query: 421  AQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSM 480
            AQSNDPYLVEKRGLAE  Q  EFSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSM
Sbjct: 994  AQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFSM 1053

Query: 481  HPGSTKLYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 540
            HPGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 1054 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1113

Query: 541  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 600
            VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 1114 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVPV 1173

Query: 601  SIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 660
            SIVSDRDAR TSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG
Sbjct: 1174 SIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1233

Query: 661  SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKSCRSPVCWGEVGEQRLMGPELVQSTNEA 674
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYGK CRSPVCW EVGEQRLMGPELVQSTNEA
Sbjct: 1234 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEA 1293

[Close]

BLAST of Cmc05g0134071 vs. NCBI nr
Match: KAA0037901.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 646/847 (76.27%), Postives = 656/847 (77.45%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 353  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 412

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYG------------ 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYG            
Sbjct: 413  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVISFGLT 472

Query: 121  -----------RVW--FSYRFRYVF----------------------------------- 180
                       RV+  F   F  VF                                   
Sbjct: 473  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNQLYAKFS 532

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 533  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPATVSEVRSFLGLAGYYRRSVENF 592

Query: 241  --------------SPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                          +PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 593  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 652

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQIFTDHKSL
Sbjct: 653  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFASKIWTHYLYGEKIQIFTDHKSL 712

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 713  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSATLITRQAPLHR 772

Query: 421  ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                    PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 773  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 832

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCV SDSAVKTELLSEAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEF
Sbjct: 833  DGGLLFERRLCVLSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 892

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 893  VSRCLVCQQVKAPRQKPAGLLQPLGIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 952

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 953  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 1012

Query: 661  FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
            FSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLHLMEFA NNSYQATIGMAPFE
Sbjct: 1013 FSTAFHPQTDGQTGRLNQVLEDMLRACALEFPGSWDSHLHLMEFANNNSYQATIGMAPFE 1072

[Close]

BLAST of Cmc05g0134071 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.4e-90
Identity = 236/846 (27.90%), Postives = 373/846 (44.09%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFR----------SRYGRV 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR            YG  
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  WFSYRFRYV--------------------------------------------------- 180
                 F+Y                                                    
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  --------------------FSP------------------------------------- 240
                                F+P                                     
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ----------------FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                            + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVNDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   + D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -----------------KPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF 480
                                 + +++   +ND  L+    L    +  E ++    GLL 
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLI 899

Query: 481  ERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEFVSKC 540
              +  + +P+D+ +   ++ + H     +HPG   L   + R + W+ +++++ E+V  C
Sbjct: 900  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 959

Query: 541  LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 600
              CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Sbjct: 960  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1019

Query: 601  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 660
             VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  
Sbjct: 1020 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1079

Query: 661  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 674
            + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1080 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1139

[Close]

BLAST of Cmc05g0134071 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.4e-90
Identity = 236/846 (27.90%), Postives = 373/846 (44.09%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFR----------SRYGRV 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR            YG  
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  WFSYRFRYV--------------------------------------------------- 180
                 F+Y                                                    
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  --------------------FSP------------------------------------- 240
                                F+P                                     
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ----------------FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                            + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVNDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   + D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -----------------KPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF 480
                                 + +++   +ND  L+    L    +  E ++    GLL 
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLI 899

Query: 481  ERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEFVSKC 540
              +  + +P+D+ +   ++ + H     +HPG   L   + R + W+ +++++ E+V  C
Sbjct: 900  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 959

Query: 541  LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 600
              CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Sbjct: 960  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1019

Query: 601  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 660
             VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  
Sbjct: 1020 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1079

Query: 661  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 674
            + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1080 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1139

[Close]

BLAST of Cmc05g0134071 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.4e-90
Identity = 236/846 (27.90%), Postives = 373/846 (44.09%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFR----------SRYGRV 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR            YG  
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  WFSYRFRYV--------------------------------------------------- 180
                 F+Y                                                    
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  --------------------FSP------------------------------------- 240
                                F+P                                     
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ----------------FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                            + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVNDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   + D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -----------------KPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF 480
                                 + +++   +ND  L+    L    +  E ++    GLL 
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLI 899

Query: 481  ERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEFVSKC 540
              +  + +P+D+ +   ++ + H     +HPG   L   + R + W+ +++++ E+V  C
Sbjct: 900  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 959

Query: 541  LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 600
              CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Sbjct: 960  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1019

Query: 601  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 660
             VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  
Sbjct: 1020 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1079

Query: 661  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 674
            + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1080 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1139

[Close]

BLAST of Cmc05g0134071 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.4e-90
Identity = 236/846 (27.90%), Postives = 373/846 (44.09%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFR----------SRYGRV 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR            YG  
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  WFSYRFRYV--------------------------------------------------- 180
                 F+Y                                                    
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  --------------------FSP------------------------------------- 240
                                F+P                                     
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ----------------FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                            + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVNDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   + D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -----------------KPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF 480
                                 + +++   +ND  L+    L    +  E ++    GLL 
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLI 899

Query: 481  ERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEFVSKC 540
              +  + +P+D+ +   ++ + H     +HPG   L   + R + W+ +++++ E+V  C
Sbjct: 900  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 959

Query: 541  LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 600
              CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Sbjct: 960  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1019

Query: 601  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 660
             VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  
Sbjct: 1020 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1079

Query: 661  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 674
            + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1080 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1139

[Close]

BLAST of Cmc05g0134071 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.4e-90
Identity = 236/846 (27.90%), Postives = 373/846 (44.09%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFR----------SRYGRV 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR            YG  
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  WFSYRFRYV--------------------------------------------------- 180
                 F+Y                                                    
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  --------------------FSP------------------------------------- 240
                                F+P                                     
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  ----------------FVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                            + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVNDYDCEILYHPGKANVVADALSR-------- 420
             TDH++L    T +    N R  RW   + D++ EI Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -----------------KPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLF 480
                                 + +++   +ND  L+    L    +  E ++    GLL 
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLI 899

Query: 481  ERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEFVSKC 540
              +  + +P+D+ +   ++ + H     +HPG   L   + R + W+ +++++ E+V  C
Sbjct: 900  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 959

Query: 541  LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAH 600
              CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A 
Sbjct: 960  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1019

Query: 601  FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA 660
             VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  
Sbjct: 1020 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1079

Query: 661  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG 674
            + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++ 
Sbjct: 1080 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHR 1139

[Close]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 649/847 (76.62%), Postives = 658/847 (77.69%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYG   F        
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  --------------------------------------------------SYRFRYV--F 240
                                                               Y  R+V  F
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S              PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                    PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTK+Y+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLD
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLD 1239

Query: 661  FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
            FSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFE
Sbjct: 1240 FSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATIGMAPFE 1299

[Close]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1248.0 bits (3228), Expect = 0.0e+00
Identity = 648/847 (76.51%), Postives = 658/847 (77.69%), Query Frame = 0


Query: 1   MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
           YPLPRIDDLFDQLQGAT+FSKIDLRSG HQLRIKDEDVPKTAFRSRYG   F        
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 --------------------------------------------------SYRFRYV--F 240
                                                              Y  R+V  F
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
           S              PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
           KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                   PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTK+YQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
           KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 698 KSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 757

Query: 661 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
           FSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 758 FSTAFHPQTDGQTERLNKVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 817

[Close]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 649/847 (76.62%), Postives = 656/847 (77.45%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 570  MAPAELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 629

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGY+QLRIKDEDVPKTAFRSRYG   F        
Sbjct: 630  YPLPRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 689

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 690  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 749

Query: 181  --------------------------------------------------SYRFRYV--F 240
                                                               Y  R+V  F
Sbjct: 750  KCEFWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 809

Query: 241  S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S              PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 810  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 869

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 870  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 929

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 930  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 989

Query: 421  ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                    PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 990  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1049

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
            DGGL FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEF
Sbjct: 1050 DGGLSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1109

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1110 VSKCLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1169

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 1170 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 1229

Query: 661  FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
            FSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1230 FSTAFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1289

[Close]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)

HSP 1 Score: 1240.7 bits (3209), Expect = 0.0e+00
Identity = 642/814 (78.87%), Postives = 651/814 (79.98%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID RELNKVTVKNR
Sbjct: 574  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNKVTVKNR 633

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGRVWF-------- 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKD DVPKTAFRSRYG   F        
Sbjct: 634  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 693

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 694  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 753

Query: 181  --------------------------------------------------SYRFRYV--F 240
                                                               Y  R+V  F
Sbjct: 754  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 813

Query: 241  S--------------PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
            S              PFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSDA KKGL
Sbjct: 814  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSDAFKKGL 873

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 874  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 933

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK-------PTLRQRIID 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK       PTLRQRIID
Sbjct: 934  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIID 993

Query: 421  AQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSM 480
            AQSNDPYLVEKRGLAE  Q  EFSLSSDGGLLFERRLCVPSD AVKTELLSEAHSSPFSM
Sbjct: 994  AQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFSM 1053

Query: 481  HPGSTKLYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 540
            HPGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN
Sbjct: 1054 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1113

Query: 541  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 600
            VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEIVRLHGVPV
Sbjct: 1114 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVPV 1173

Query: 601  SIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 660
            SIVSDRDAR TSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG
Sbjct: 1174 SIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1233

Query: 661  SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKSCRSPVCWGEVGEQRLMGPELVQSTNEA 674
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYGK CRSPVCW EVGEQRLMGPELVQSTNEA
Sbjct: 1234 SWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEA 1293

[Close]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL
Match: A0A5A7T8G8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00730 PE=4 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 646/847 (76.27%), Postives = 656/847 (77.45%), Query Frame = 0


Query: 1    MAPAELKELKIQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELK+QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+
Sbjct: 353  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNK 412

Query: 61   YPLPRIDDLFDQLQGATMFSKIDLRSGYHQLRIKDEDVPKTAFRSRYG------------ 120
            YPLPRIDDLFDQLQGAT+FSKIDLRSGYHQLRIKDEDVPKTAFRSRYG            
Sbjct: 413  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVISFGLT 472

Query: 121  -----------RVW--FSYRFRYVF----------------------------------- 180
                       RV+  F   F  VF                                   
Sbjct: 473  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNQLYAKFS 532

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 533  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPATVSEVRSFLGLAGYYRRSVENF 592

Query: 241  --------------SPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 300
                          +PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 593  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 652

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQIFTDHKSL
Sbjct: 653  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFASKIWTHYLYGEKIQIFTDHKSL 712

Query: 361  KYFFTQKELNMRQRRWLELVNDYDCEILYHPGKANVVADALSRK---------------- 420
            KYFFTQKELNMRQRRWLELV DYDCEILYHPGKANVVADALSRK                
Sbjct: 713  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSATLITRQAPLHR 772

Query: 421  ------------------------PTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 480
                                    PTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 773  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 832

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKLYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCV SDSAVKTELLSEAHSSPFSMHPGSTK+YQDLKRVYWWRNMKREVAEF
Sbjct: 833  DGGLLFERRLCVLSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 892

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 893  VSRCLVCQQVKAPRQKPAGLLQPLGIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 952

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 660
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD
Sbjct: 953  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLD 1012

Query: 661  FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 674
            FSTAFHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLHLMEFA NNSYQATIGMAPFE
Sbjct: 1013 FSTAFHPQTDGQTGRLNQVLEDMLRACALEFPGSWDSHLHLMEFANNNSYQATIGMAPFE 1072

The following BLAST results are available for this feature:

BLAST of Cmc05g0134071 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	0.0e+00	76.62	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	0.0e+00	76.51	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051357.1	0.0e+00	76.62	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053234.1	0.0e+00	78.87	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0037901.1	0.0e+00	76.27	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0134071 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	2.4e-90	27.90	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.4e-90	27.90	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.4e-90	27.90	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.4e-90	27.90	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	2.4e-90	27.90	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	0.0e+00	76.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UP94	0.0e+00	76.51	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7UAA8	0.0e+00	76.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7UDB1	0.0e+00	78.87	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]
A0A5A7T8G8	0.0e+00	76.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36...	[more]

BLAST of Cmc05g0134071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 153..249 e-value: 2.8E-34 score: 117.6
None	No IPR available	GENE3D	3.10.20.370		coord: 150..220 e-value: 1.2E-8 score: 36.8
None	No IPR available	GENE3D	1.10.340.70		coord: 287..377 e-value: 1.6E-17 score: 65.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..120 e-value: 5.9E-49 score: 168.2
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 314..558 coord: 123..275
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..136 e-value: 5.32079E-46 score: 159.298
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 156..271 e-value: 4.54894E-60 score: 195.404
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 387..594 e-value: 4.6E-47 score: 161.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 322..378 e-value: 1.5E-16 score: 60.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..138 e-value: 5.9E-49 score: 168.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..106 e-value: 4.2E-8 score: 33.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 389..552 score: 19.304106
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 390..548
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0134071.1	Cmc05g0134071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding