Cmc05g0134031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0134031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr05: 15044034 .. 15044588 (-)
RNA-Seq Expression	Cmc05g0134031
Synteny	Cmc05g0134031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGTACAAATCAAAGGTGATGAGGAAGATCATCAAAGCTCTGCTAGAAAGATATAGTGACATATTTGAGATGCCTAGAGAACTACCTCCTAAGAGGAGCATTGATCATCACATCCTTACATTGTTGGAGCAAAAACCCACCAACGATGGGCCTTACAAATATAGTCATGCTCAGAAAGAAGAGATAGAAAAACTAGTGACAGAGATGCTCCAAGCGGGGGTGATTAGACCTAACCACAGCCCCTACTCCAGCCTGGTTCTATTGGTAAAGAAAAAAGATGGAGGGCGGAGGTTTTGTGTGGATCATAGGAAGCTGAATCAAGTAATGGTGTCTGATAAATTTCCAATCCTTGTAATAGAAGAATTGATGGATGAACTACATGGAGCCAAGGTATTCTCAAAGCTGGACTTGAAATCTGGGTACGACCAGATTAGAATGAAAGAGGAAGACATTGAAAAGACTGCTTTCGAAACTCACGAAGGCCATTATGAGTTCCTTGTCATGCCGTTTGGCCTCCCAACGCACGGGCTACCTTCCAATCTCTCATGA

mRNA sequence

ATGAAGAAGTACAAATCAAAGGTGATGAGGAAGATCATCAAAGCTCTGCTAGAAAGATATAGTGACATATTTGAGATGCCTAGAGAACTACCTCCTAAGAGGAGCATTGATCATCACATCCTTACATTGTTGGAGCAAAAACCCACCAACGATGGGCCTTACAAATATAGTCATGCTCAGAAAGAAGAGATAGAAAAACTAGTGACAGAGATGCTCCAAGCGGGGGTGATTAGACCTAACCACAGCCCCTACTCCAGCCTGGTTCTATTGGTAAAGAAAAAAGATGGAGGGCGGAGGTTTTGTGTGGATCATAGGAAGCTGAATCAAGTAATGGTGTCTGATAAATTTCCAATCCTTGTAATAGAAGAATTGATGGATGAACTACATGGAGCCAAGGTATTCTCAAAGCTGGACTTGAAATCTGGGTACGACCAGATTAGAATGAAAGAGGAAGACATTGAAAAGACTGCTTTCGAAACTCACGAAGGCCATTATGAGTTCCTTGTCATGCCGTTTGGCCTCCCAACGCACGGGCTACCTTCCAATCTCTCATGA

Coding sequence (CDS)

ATGAAGAAGTACAAATCAAAGGTGATGAGGAAGATCATCAAAGCTCTGCTAGAAAGATATAGTGACATATTTGAGATGCCTAGAGAACTACCTCCTAAGAGGAGCATTGATCATCACATCCTTACATTGTTGGAGCAAAAACCCACCAACGATGGGCCTTACAAATATAGTCATGCTCAGAAAGAAGAGATAGAAAAACTAGTGACAGAGATGCTCCAAGCGGGGGTGATTAGACCTAACCACAGCCCCTACTCCAGCCTGGTTCTATTGGTAAAGAAAAAAGATGGAGGGCGGAGGTTTTGTGTGGATCATAGGAAGCTGAATCAAGTAATGGTGTCTGATAAATTTCCAATCCTTGTAATAGAAGAATTGATGGATGAACTACATGGAGCCAAGGTATTCTCAAAGCTGGACTTGAAATCTGGGTACGACCAGATTAGAATGAAAGAGGAAGACATTGAAAAGACTGCTTTCGAAACTCACGAAGGCCATTATGAGTTCCTTGTCATGCCGTTTGGCCTCCCAACGCACGGGCTACCTTCCAATCTCTCATGA

Protein sequence

MKKYKSKVMRKIIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEMLQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGLPTHGLPSNLS

Homology

[Close]

BLAST of Cmc05g0134031 vs. NCBI nr
Match: XP_031744430.1 (uncharacterized protein LOC116405043 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 3.1e-66
Identity = 128/163 (78.53%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +IK LL++Y+DIFE P++LPPKR IDH IL L  Q+P N  PYKY + QKEEIEKLV EM
Sbjct: 558 MIKNLLQQYADIFEDPKKLPPKREIDHRILVLPNQRPINVRPYKYGYVQKEEIEKLVVEM 617

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQAGVIRP+HSPYSS VLLVKKKDGG RFCVD+RKLNQV +SDKFPI VIEEL+DELHGA
Sbjct: 618 LQAGVIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHGA 677

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            VFSKLDLKSGY QIRM +ED+EKTAF THEGHYEFLVMPFGL
Sbjct: 678 TVFSKLDLKSGYHQIRMHKEDVEKTAFRTHEGHYEFLVMPFGL 720

[Close]

BLAST of Cmc05g0134031 vs. NCBI nr
Match: XP_031745472.1 (uncharacterized protein K02A2.6-like [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 5.3e-66
Identity = 125/163 (76.69%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +++ LLE+Y+D+F +PR LPP+R+IDH ILT+ +QKP N  PYKY H QKEEIEKLV EM
Sbjct: 497 MVQRLLEQYADVFRLPRGLPPRRAIDHRILTVADQKPINVRPYKYGHVQKEEIEKLVLEM 556

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQAGVIRP+ SPYSS VLLVKKKDGG RFCVD+RKLNQV V+DKFPI V EEL+DELHGA
Sbjct: 557 LQAGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTVADKFPIPVTEELLDELHGA 616

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
             FSKLDLKSGY QIRM+EED+EKTAF THEGHYEFLVMPFGL
Sbjct: 617 TAFSKLDLKSGYHQIRMREEDVEKTAFRTHEGHYEFLVMPFGL 659

[Close]

BLAST of Cmc05g0134031 vs. NCBI nr
Match: XP_031745726.1 (uncharacterized protein K02A2.6-like [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 5.3e-66
Identity = 125/163 (76.69%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +++ LLE+Y+D+F +PR LPP+R+IDH ILT+ +QKP N  PYKY H QKEEIEKLV EM
Sbjct: 468 MVQRLLEQYADVFRLPRGLPPRRAIDHRILTVADQKPINVRPYKYGHVQKEEIEKLVLEM 527

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQAGVIRP+ SPYSS VLLVKKKDGG RFCVD+RKLNQV V+DKFPI V EEL+DELHGA
Sbjct: 528 LQAGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTVADKFPIPVTEELLDELHGA 587

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
             FSKLDLKSGY QIRM+EED+EKTAF THEGHYEFLVMPFGL
Sbjct: 588 TAFSKLDLKSGYHQIRMREEDVEKTAFRTHEGHYEFLVMPFGL 630

[Close]

BLAST of Cmc05g0134031 vs. NCBI nr
Match: KAE8637598.1 (hypothetical protein CSA_022681 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 7.0e-66
Identity = 125/163 (76.69%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +++ LLE+Y+D+F +P  LPP+R+IDH ILT+ +QKP N  PYKY H QKEEIEKLV EM
Sbjct: 87  MVQRLLEQYADVFRLPTGLPPRRAIDHRILTVADQKPINVRPYKYGHVQKEEIEKLVLEM 146

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQAGVIRP+ SPYSS VLLVKKKDGG RFCVD+RKLNQV V+DKFPI VIEEL+DELHGA
Sbjct: 147 LQAGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTVADKFPIPVIEELLDELHGA 206

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
             FSKLDLKSGY QIRM+EED+EKTAF THEGHYEFLVMPFGL
Sbjct: 207 TAFSKLDLKSGYHQIRMREEDVEKTAFHTHEGHYEFLVMPFGL 249

[Close]

BLAST of Cmc05g0134031 vs. NCBI nr
Match: XP_031745528.1 (uncharacterized protein LOC116405915 [Cucumis sativus])

HSP 1 Score: 260.8 bits (665), Expect = 9.1e-66
Identity = 124/163 (76.07%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +I+ LL++Y+D+FE P+ LPPKR  DH IL +  QKP N  PYKY H QKEEIEKL++EM
Sbjct: 560 MIQVLLQQYTDLFEEPKGLPPKRECDHRILLVTGQKPINVRPYKYGHTQKEEIEKLISEM 619

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQ G+IRP+HSPYSS VLLV+KKDGG RFCVD+RKLNQV +SDKFPI VIEEL+DELHGA
Sbjct: 620 LQVGIIRPSHSPYSSPVLLVRKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHGA 679

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            VFSKLDLKSGY QIRMKEED+EKTAF THEGHYEFLVMPFGL
Sbjct: 680 TVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFLVMPFGL 722

[Close]

BLAST of Cmc05g0134031 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 67/165 (40.61%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 16  LLERYSDIFEMPRELPPKRS------IDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVT 75
           L ++Y +I     +LPP+ +      + H I      +     PY  +   ++EI K+V 
Sbjct: 560 LQQKYREIIR--NDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 619

Query: 76  EMLQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELH 135
           ++L    I P+ SP SS V+LV KKDG  R CVD+R LN+  +SD FP+  I+ L+  + 
Sbjct: 620 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 679

Query: 136 GAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            A++F+ LDL SGY QI M+ +D  KTAF T  G YE+ VMPFGL
Sbjct: 680 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGL 722

[Close]

BLAST of Cmc05g0134031 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 67/165 (40.61%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 16  LLERYSDIFEMPRELPPKRS------IDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVT 75
           L ++Y +I     +LPP+ +      + H I      +     PY  +   ++EI K+V 
Sbjct: 586 LQQKYREIIR--NDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 645

Query: 76  EMLQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELH 135
           ++L    I P+ SP SS V+LV KKDG  R CVD+R LN+  +SD FP+  I+ L+  + 
Sbjct: 646 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 705

Query: 136 GAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            A++F+ LDL SGY QI M+ +D  KTAF T  G YE+ VMPFGL
Sbjct: 706 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGL 748

[Close]

BLAST of Cmc05g0134031 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 10  RKIIKALLERYSDIFEMPRE-LPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLV 69
           ++I+ +LL  +  IFE P   +  + ++   I T   Q P     Y Y    + E+E+ +
Sbjct: 85  QEILNSLLGEFPRIFEPPLSGMSVETAVKAEIRT-NTQDPIYAKSYPYPVNMRGEVERQI 144

Query: 70  TEMLQAGVIRPNHSPYSSLVLLVKKK-----DGGRRFCVDHRKLNQVMVSDKFPILVIEE 129
            E+LQ G+IRP++SPY+S + +V KK     +   R  VD ++LN V + D +PI  I  
Sbjct: 145 DELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINA 204

Query: 130 LMDELHGAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            +  L  AK F+ LDL SG+ QI MKE DI KTAF T  G YEFL +PFGL
Sbjct: 205 TLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGL 254

[Close]

BLAST of Cmc05g0134031 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-24
Identity = 60/167 (35.93%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 13  IKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEML 72
           +K LL ++ ++     E     +   H+L      P     Y  +   + E+E  V EML
Sbjct: 171 LKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEML 230

Query: 73  QAGVIRPNHSPYSSLVLLVKKKDGGR-----RFCVDHRKLNQVMVSDKFPILVIEELMDE 132
             G+IR ++SPY+S   +V KK         R  +D+RKLN++ + D++PI  ++E++ +
Sbjct: 231 NQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGK 290

Query: 133 LHGAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
           L   + F+ +DL  G+ QI M EE I KTAF T  GHYE+L MPFGL
Sbjct: 291 LGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGL 337

[Close]

BLAST of Cmc05g0134031 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.8e-24
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 0


Query: 15  ALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEMLQA 74
           ALL++Y DI     +     +   H +      P     Y Y  A ++E+E  + +ML  
Sbjct: 175 ALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLY-SKYSYPQAYEQEVESQIQDMLNQ 234

Query: 75  GVIRPNHSPYSSLVLLVKKKDGGR-----RFCVDHRKLNQVMVSDKFPILVIEELMDELH 134
           G+IR ++SPY+S + +V KK         R  +D+RKLN++ V D+ PI  ++E++ +L 
Sbjct: 235 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 294

Query: 135 GAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
               F+ +DL  G+ QI M  E + KTAF T  GHYE+L MPFGL
Sbjct: 295 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGL 338

[Close]

BLAST of Cmc05g0134031 vs. ExPASy TrEMBL
Match: A0A5A7UXB4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00080 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.7e-66
Identity = 126/163 (77.30%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +I+ LL +YSD+FE P  LPPKRSIDH ILTL  QKP N  PYKY H QKEEIEKLV EM
Sbjct: 559 MIQFLLHQYSDVFESPTTLPPKRSIDHRILTLPGQKPINVRPYKYGHQQKEEIEKLVIEM 618

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQ G+IRP+HSP+SS VLLVKKKDGG RFCVD+RKLN++ ++DKFPI VIEEL+DELHGA
Sbjct: 619 LQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHGA 678

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            VFSKLDLKSGY QIRM+EEDIEKTAF THEGHYEF+VMPFGL
Sbjct: 679 TVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGL 721

[Close]

BLAST of Cmc05g0134031 vs. ExPASy TrEMBL
Match: A0A5D3DJK4 (T32E20.30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00100 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.5e-66
Identity = 127/133 (95.49%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 45  EQKPTNDGPYKYSHAQKEEIEKLVTEMLQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDH 104
           EQKPTNDGPYKYSHAQKEEIEKLVTEMLQAGVIRPNHSPYSSLVLLVKKKDG RRFCVDH
Sbjct: 122 EQKPTNDGPYKYSHAQKEEIEKLVTEMLQAGVIRPNHSPYSSLVLLVKKKDGRRRFCVDH 181

Query: 105 RKLNQVMVSDKFPILVIEELMDELHGAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGH 164
           RKLNQVMVSDKFPILVIEELMDELHGAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGH
Sbjct: 182 RKLNQVMVSDKFPILVIEELMDELHGAKVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGH 241

Query: 165 YEFLVMPFGLPTH 178
           YEFLVMP  +  H
Sbjct: 242 YEFLVMPADITEH 254

[Close]

BLAST of Cmc05g0134031 vs. ExPASy TrEMBL
Match: A0A5D3CW02 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00980 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.8e-66
Identity = 126/163 (77.30%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +I+ LL++Y+DIF  P+ LPPKR IDH ILT+ +Q+P N  PYKY H QKEEIE LV EM
Sbjct: 522 MIRFLLQQYADIFATPKGLPPKREIDHRILTMPDQRPINVRPYKYGHVQKEEIENLVAEM 581

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQ G+IRP+HSPYSS VLLVK+KDGG RFCVD+RKLNQ  VSDKFPI VIEEL+DELHGA
Sbjct: 582 LQDGIIRPSHSPYSSPVLLVKEKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELHGA 641

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            VFSKLDLKSGY QIRMKEEDIEKTAF THEGHYEFLVMPFGL
Sbjct: 642 AVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGL 684

[Close]

BLAST of Cmc05g0134031 vs. ExPASy TrEMBL
Match: A0A5D3CT96 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001230 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.8e-66
Identity = 126/163 (77.30%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +I+ LL +YSD+FE P  LPPKRSIDH ILTL  QKP N  PYKY H QKEEIEKLV EM
Sbjct: 559 MIQFLLHQYSDVFESPTTLPPKRSIDHRILTLPGQKPINVRPYKYGHQQKEEIEKLVMEM 618

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQ G+IRP+HSP+SS VLLVKKKDGG RFCVD+RKLN + ++DKFPI VIEEL+DELHGA
Sbjct: 619 LQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNTITIADKFPIPVIEELLDELHGA 678

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            VFSKLDLKSGY QIRM+EEDIEKTAF THEGHYEF+VMPFGL
Sbjct: 679 TVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGL 721

[Close]

BLAST of Cmc05g0134031 vs. ExPASy TrEMBL
Match: A0A5D3DZ80 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00740 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.8e-66
Identity = 123/163 (75.46%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 12  IIKALLERYSDIFEMPRELPPKRSIDHHILTLLEQKPTNDGPYKYSHAQKEEIEKLVTEM 71
           +I+ LL +Y D+F++P+ LPPKR++DH I TL EQKP N  PYKY H QKEEIEKLVTEM
Sbjct: 530 MIQFLLNQYFDLFDIPKTLPPKRAVDHRIFTLPEQKPINVRPYKYGHNQKEEIEKLVTEM 589

Query: 72  LQAGVIRPNHSPYSSLVLLVKKKDGGRRFCVDHRKLNQVMVSDKFPILVIEELMDELHGA 131
           LQ G+IRP+HSP+SS VLLVKKKDGG RFCVD+RKLN++ ++DKFPI +IEEL+DELHGA
Sbjct: 590 LQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPIIEELLDELHGA 649

Query: 132 KVFSKLDLKSGYDQIRMKEEDIEKTAFETHEGHYEFLVMPFGL 175
            VFSKLDLKSGY QIRMKEEDIEKTAF THEGHYEFLVMP GL
Sbjct: 650 TVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPLGL 692

[Close]

BLAST of Cmc05g0134031 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 20/38 (52.63%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 60 QKEEIEKLVTEMLQAGVIRPNHSPYSSLVLLVKKKDGG 98
          ++  ++  + EML+A +I+P+ SPYSS VLLV+KKDGG
Sbjct: 41 RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGG 78

The following BLAST results are available for this feature:

BLAST of Cmc05g0134031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744430.1	3.1e-66	78.53	uncharacterized protein LOC116405043 [Cucumis sativus]	[more]
XP_031745472.1	5.3e-66	76.69	uncharacterized protein K02A2.6-like [Cucumis sativus]	[more]
XP_031745726.1	5.3e-66	76.69	uncharacterized protein K02A2.6-like [Cucumis sativus]	[more]
KAE8637598.1	7.0e-66	76.69	hypothetical protein CSA_022681 [Cucumis sativus]	[more]
XP_031745528.1	9.1e-66	76.07	uncharacterized protein LOC116405915 [Cucumis sativus]	[more]

BLAST of Cmc05g0134031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.2e-25	40.61	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.2e-25	40.61	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	1.4e-24	40.35	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P20825	2.4e-24	35.93	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	6.8e-24	36.36	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]

BLAST of Cmc05g0134031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXB4	5.7e-66	77.30	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DJK4	7.5e-66	95.49	T32E20.30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00100 PE=4...	[more]
A0A5D3CW02	9.8e-66	77.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CT96	9.8e-66	77.30	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DZ80	9.8e-66	75.46	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Cmc05g0134031 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00850.1	1.2e-04	52.63	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 36..174 e-value: 4.4E-51 score: 175.2
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 13..174
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 13..174
None	No IPR available	CDD	cd01647	RT_LTR	coord: 75..174 e-value: 3.06938E-49 score: 155.446
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 91..176 e-value: 1.1E-8 score: 34.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 116..143 e-value: 4.4E-51 score: 175.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 17..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0134031.1	Cmc05g0134031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0000976	transcription cis-regulatory region binding