Cmc05g0133561 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0133561
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Agglutinin domain-containing protein
Location	CMiso1.1chr05: 14326786 .. 14328184 (-)
RNA-Seq Expression	Cmc05g0133561
Synteny	Cmc05g0133561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCTTCTGCACAAAACATTTATCCCTAAAACCTTCTACACTATTTTCTTTCGCCCAAGGAAGAACGGGTACAACGTTTTGTTCTTCTTCTTTATCACTCTGCCTTTTTTGTTGATTGGTTTGCAGTGGCCACTATTGGTGAGGATTGGACTGAGGAATTGGAAAAGAAAGACGGTGCCGATGGGGAGGAGACGGATTAGGTTTCTGATGCCGGTAAGGGTTTTTTCAGTGGCAGAGGCAACCATGAATTGAAATGGGTAGGATTTGATTGATTTTAGTGTGATTGTTGTTGATTTTTGTTTTGATTTAGGCATTTGGATGTGATAGAAGAAGAAATTTAGAGAATTTAAATAAAAGAAAGTTAGGGAGATTTGTTATTCAATGGGTTTGGAATTGGAATTTGCTTATACGCAAATGAATAAAGATTGAAGAAGACGGTGGTGCTTTGGTTTGCTTTTACTTTAAAATAATTTAGGCATTTCTATGGTTTTGCCTTTCAACTAGGAAATTGATAAAAAGTATGGCTAGGTAAAATATTTTATATGTTTCAGATTGAAATTTTATTCATATTCATCTAATGAAGGTTGATTTCTTTTTGTGAGACTTCTTTAATTGATTTTGTCTTTTTGATAAGCTTTCCTGTTGTTCTTCATATTACTGCTTGATTGTTTGTCTTGATATTTTGGTTGTGGATTTTCAAGGAGCTATGAATGGAAGCGATGAAGTGAATAAAATGGATTTTAAGTTTTCTTATGAAGAGAAAGGAAGTTAGTGTTAGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAATAGAAGCTGGAATTCCATTAATTATGGACACAAATATTGTAATATCAAGGGAGATTTCAGATTCTTATACATGGGGACAAACCAATAAGAAATCAACTGATAAAACATCTTCATATTCACTTAAAGTACATCCAAGAATTTCAGTCAAAGTGAGTGCCATGCTAACCAAAGGATATTGTGATGTTCCATTCTCATATACTTAACGTGATCTTCTTGTCAATGGACAAACAAGAACTACAGAACATGATTATGGTTTTCACAGGACTCAATTGCTACAATATGGAGAGAAATCTGGTAATGAGTCTTGGAAAGGACTTTCTTAGAGAATGGTAAGTTCCTTTTCTTTGTCTCTAAACCTATTATTATATTATTTATTTTGAAGTCTTGGAAAGAACTTTCTTGTGGATGACCAAGAGTGCCCTGTAGATGTTTACGTGATAGAATTAAGAGGGTCTGTAGGTAACTTAATTGTTACATTGGAATGTAATTTGTAACGCATGAACCGTATAAAACTGTTAAGTTAATAAAGAGAAGTAGTTATGTACTTCGCTATTTTATTATTATTCATTTGAGTTGTC

mRNA sequence

TTTTTTCTTCTGCACAAAACATTTATCCCTAAAACCTTCTACACTATTTTCTTTCGCCCAAGGAAGAACGGGTACAACGTTTTGTTCTTCTTCTTTATCACTCTGCCTTTTTTGTTGATTGGTTTGCAGTGGCCACTATTGGTGAGGATTGGACTGAGGAATTGGAAAAGAAAGACGGTGCCGATGGGGAGGAGACGGATTAGGTTTCTGATGCCGGAGCTATGAATGGAAGCGATGAAGTGAATAAAATGGATTTTAAGTTTTCTTATGAAGAGAAAGGAAGTTAGTGTTAGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAATAGAAGCTGGAATTCCATTAATTATGGACACAAATATTGTAATATCAAGGGAGATTTCAGATTCTTATACATGGGGACAAACCAATAAGAAATCAACTGATAAAACATCTTCATATTCACTTAAAGTACATCCAAGAATTTCAGTCAAAGTGAGTGCCATGCTAACCAAAGGATATTGTGATGTTCCATTCTCATATACTTAACGTGATCTTCTTGTCAATGGACAAACAAGAACTACAGAACATGATTATGGTTTTCACAGGACTCAATTGCTACAATATGGAGAGAAATCTGGTAATGAGTCTTGGAAAGGACTTTCTTAGAGAATGGTAAGTTCCTTTTCTTTGTCTCTAAACCTATTATTATATTATTTATTTTGAAGTCTTGGAAAGAACTTTCTTGTGGATGACCAAGAGTGCCCTGTAGATGTTTACGTGATAGAATTAAGAGGGTCTGTAGGTAACTTAATTGTTACATTGGAATGTAATTTGTAACGCATGAACCGTATAAAACTGTTAAGTTAATAAAGAGAAGTAGTTATGTACTTCGCTATTTTATTATTATTCATTTGAGTTGTC

Coding sequence (CDS)

ATGAAATTGGCTTATTCAATGACAATAGAAGCTGGAATTCCATTAATTATGGACACAAATATTGTAATATCAAGGGAGATTTCAGATTCTTATACATGGGGACAAACCAATAAGAAATCAACTGATAAAACATCTTCATATTCACTTAAAGTACATCCAAGAATTTCAGTCAAAGTGAGTGCCATGCTAACCAAAGGATATTGTGATGTTCCATTCTCATATACTTAA

Protein sequence

MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVSAMLTKGYCDVPFSYT

Homology

[Close]

BLAST of Cmc05g0133561 vs. NCBI nr
Match: XP_008458669.1 (PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo] >TYK24762.1 uncharacterized protein E5676_scaffold266G003250 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1   MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVS 60
           MKLAYSMTIEAGIPLIMDTNIV+S EIS+SYTWGQTNKKST K +SYSL+V PR SVKVS
Sbjct: 350 MKLAYSMTIEAGIPLIMDTNIVMSGEISESYTWGQTNKKSTPKRTSYSLEVQPRTSVKVS 409

Query: 61  AMLTKGYCDVPFSYT 76
           AMLTKGYCDVPFSYT
Sbjct: 410 AMLTKGYCDVPFSYT 424

[Close]

BLAST of Cmc05g0133561 vs. NCBI nr
Match: KGN46563.1 (hypothetical protein Csa_005179 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.3e-14
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKV 52
          MKLAYSMTIEAGIP IM TNIVIS +ISDSYTWGQTNKKST KTSSYSL+V
Sbjct: 46 MKLAYSMTIEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV 96

[Close]

BLAST of Cmc05g0133561 vs. NCBI nr
Match: XP_008458670.1 (PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo] >TYK24763.1 uncharacterized protein E5676_scaffold266G003260 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-11
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 1   MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVS 60
           MKL + +    GIPLI    I +S EIS SY+WG+T  K T K SSY   V P+  VKVS
Sbjct: 349 MKLGFGLEFSGGIPLITSAGITVSGEISGSYSWGETLTKKTSKESSYQTIVPPKTRVKVS 408

Query: 61  AMLTKGYCDVPFSY 75
            + +KG CD+PFSY
Sbjct: 409 LIASKGKCDIPFSY 422

[Close]

BLAST of Cmc05g0133561 vs. NCBI nr
Match: KAG6603267.1 (hypothetical protein SDJN03_03876, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 2   KLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVSA 61
           KL    TI+ GIPLI +  I +S E S  YTWG+T  KS++  + Y++ V P   V+VS 
Sbjct: 37  KLGVQTTIQTGIPLIAERKIEMSAEFSGEYTWGETKSKSSEIETVYTITVPPMSRVRVSL 96

Query: 62  MLTKGYCDVPFSYT 76
           + TKG CDVP+SYT
Sbjct: 97  LATKGQCDVPYSYT 110

[Close]

BLAST of Cmc05g0133561 vs. NCBI nr
Match: XP_023544075.1 (uncharacterized protein LOC111803769 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 2   KLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVSA 61
           KL    TI+ GIPLI +  I +S E S  YTWG+T  KS++  + Y + V P   V+VS 
Sbjct: 354 KLGVKTTIQTGIPLIAEGKIEMSAEFSGGYTWGETQSKSSEIETVYKVTVPPMSRVRVSL 413

Query: 62  MLTKGYCDVPFSYT 76
           + TKG+CDVP+SYT
Sbjct: 414 LATKGHCDVPYSYT 427

[Close]

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL
Match: A0A5D3DML5 (Agglutinin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003250 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.6e-28
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1   MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVS 60
           MKLAYSMTIEAGIPLIMDTNIV+S EIS+SYTWGQTNKKST K +SYSL+V PR SVKVS
Sbjct: 350 MKLAYSMTIEAGIPLIMDTNIVMSGEISESYTWGQTNKKSTPKRTSYSLEVQPRTSVKVS 409

Query: 61  AMLTKGYCDVPFSYT 76
           AMLTKGYCDVPFSYT
Sbjct: 410 AMLTKGYCDVPFSYT 424

[Close]

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL
Match: A0A1S3C8I1 (uncharacterized protein LOC103497997 OS=Cucumis melo OX=3656 GN=LOC103497997 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.6e-28
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1   MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVS 60
           MKLAYSMTIEAGIPLIMDTNIV+S EIS+SYTWGQTNKKST K +SYSL+V PR SVKVS
Sbjct: 350 MKLAYSMTIEAGIPLIMDTNIVMSGEISESYTWGQTNKKSTPKRTSYSLEVQPRTSVKVS 409

Query: 61  AMLTKGYCDVPFSYT 76
           AMLTKGYCDVPFSYT
Sbjct: 410 AMLTKGYCDVPFSYT 424

[Close]

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL
Match: A0A0A0KAR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108610 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-14
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1  MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKV 52
          MKLAYSMTIEAGIP IM TNIVIS +ISDSYTWGQTNKKST KTSSYSL+V
Sbjct: 46 MKLAYSMTIEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV 96

[Close]

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL
Match: A0A0A0KCL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108620 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-11
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 1  MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVS 60
          MKL + +    GIPLI    I++S EIS SY+WG+T  K T K SSY   + P   VKVS
Sbjct: 1  MKLGFGLEFNGGIPLITSAGIIVSGEISGSYSWGETLTKKTSKESSYETIMPPNTYVKVS 60

Query: 61 AMLTKGYCDVPFSY 75
           + TKG CD+PFSY
Sbjct: 61 LIATKGKCDIPFSY 74

[Close]

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL
Match: A0A5D3DM96 (Agglutinin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003260 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 1   MKLAYSMTIEAGIPLIMDTNIVISREISDSYTWGQTNKKSTDKTSSYSLKVHPRISVKVS 60
           MKL + +    GIPLI    I +S EIS SY+WG+T  K T K SSY   V P+  VKVS
Sbjct: 349 MKLGFGLEFSGGIPLITSAGITVSGEISGSYSWGETLTKKTSKESSYQTIVPPKTRVKVS 408

Query: 61  AMLTKGYCDVPFSY 75
            + +KG CD+PFSY
Sbjct: 409 LIASKGKCDIPFSY 422

The following BLAST results are available for this feature:

BLAST of Cmc05g0133561 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458669.1	2.0e-27	88.00	PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo] >TYK24762.1 uncha...	[more]
KGN46563.1	3.3e-14	88.24	hypothetical protein Csa_005179 [Cucumis sativus]	[more]
XP_008458670.1	3.4e-11	51.35	PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo] >TYK24763.1 uncha...	[more]
KAG6603267.1	2.9e-10	48.65	hypothetical protein SDJN03_03876, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023544075.1	2.9e-10	48.65	uncharacterized protein LOC111803769 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc05g0133561 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DML5	9.6e-28	88.00	Agglutinin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C8I1	9.6e-28	88.00	uncharacterized protein LOC103497997 OS=Cucumis melo OX=3656 GN=LOC103497997 PE=...	[more]
A0A0A0KAR2	1.6e-14	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108610 PE=4 SV=1	[more]
A0A0A0KCL3	1.3e-11	51.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108620 PE=4 SV=1	[more]
A0A5D3DM96	1.6e-11	51.35	Agglutinin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cmc05g0133561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.170.15.10	Proaerolysin, chain A, domain 3	coord: 1..75 e-value: 1.2E-18 score: 69.2
None	No IPR available	PANTHER	PTHR39244	NATTERIN-4	coord: 1..75
None	No IPR available	SUPERFAMILY	56973	Aerolisin/ETX pore-forming domain	coord: 2..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0133561.1	Cmc05g0133561.1	mRNA