Cmc05g0133361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0133361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 13963191 .. 13963589 (-)
RNA-Seq Expression	Cmc05g0133361
Synteny	Cmc05g0133361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCTTGGGGAGCACCAGTATTGTTTGTAAAGAAGAAGGATGGATCGATGCGCCTTTGCATCGATTACAAAAAGCTGAATAAGGTGATAGTCAAGAACCGCTATCCATTACCTAGAATTGATGACTTGTTTGATCAGCTACAAGGAGCCACTGTTTTCTCTAAGATTGATTTATGTTCAGGCTATCGCCAACTGACGATTAGAGACAGTGATATTCCTAAGACTGCTTTTCGTTCTAGATATGGACATTACAAGTTCATTGTAATGTCCTTTGACTTGACCAATGCTTCTACTGTATTTATGGATTTGATGAACAAAGTGTTTAAGGATTTCTTAGACACTTTTGTTATAGTTTTCATTGATAACATCTTGGTTTACTCCAAGACAGAGGCTTAG

mRNA sequence

ATGTCACCTTGGGGAGCACCAGTATTGTTTGTAAAGAAGAAGGATGGATCGATGCGCCTTTGCATCGATTACAAAAAGCTGAATAAGGTGATAGTCAAGAACCGCTATCCATTACCTAGAATTGATGACTTGTTTGATCAGCTACAAGGAGCCACTGTTTTCTCTAAGATTGATTTATGTTCAGGCTATCGCCAACTGACGATTAGAGACAGTGATATTCCTAAGACTGCTTTTCGTTCTAGATATGGACATTACAAGTTCATTGTAATGTCCTTTGACTTGACCAATGCTTCTACTGTATTTATGGATTTGATGAACAAAGTGTTTAAGGATTTCTTAGACACTTTTGTTATAGTTTTCATTGATAACATCTTGGTTTACTCCAAGACAGAGGCTTAG

Coding sequence (CDS)

ATGTCACCTTGGGGAGCACCAGTATTGTTTGTAAAGAAGAAGGATGGATCGATGCGCCTTTGCATCGATTACAAAAAGCTGAATAAGGTGATAGTCAAGAACCGCTATCCATTACCTAGAATTGATGACTTGTTTGATCAGCTACAAGGAGCCACTGTTTTCTCTAAGATTGATTTATGTTCAGGCTATCGCCAACTGACGATTAGAGACAGTGATATTCCTAAGACTGCTTTTCGTTCTAGATATGGACATTACAAGTTCATTGTAATGTCCTTTGACTTGACCAATGCTTCTACTGTATTTATGGATTTGATGAACAAAGTGTTTAAGGATTTCTTAGACACTTTTGTTATAGTTTTCATTGATAACATCTTGGTTTACTCCAAGACAGAGGCTTAG

Protein sequence

MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLCSGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVFIDNILVYSKTEA

Homology

[Close]

BLAST of Cmc05g0133361 vs. NCBI nr
Match: KAA0066907.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61
Identity = 119/132 (90.15%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY++LNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 99  VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLW 158

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRDSDIPKTAFRSRYGHY+FIVMSF LTNA TVFMDLMN+VFKDFLD+FVIVF
Sbjct: 159 SGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFKDFLDSFVIVF 218

Query: 121 IDNILVYSKTEA 133
           IDNIL+YSKTEA
Sbjct: 219 IDNILIYSKTEA 230

[Close]

BLAST of Cmc05g0133361 vs. NCBI nr
Match: KAA0039594.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60
Identity = 117/132 (88.64%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGS+RLCIDY+KLNKV VKNRYPLPRIDDLFDQLQG+TVFSKIDL 
Sbjct: 511 VSPWGAPVLFVKKKDGSIRLCIDYRKLNKVTVKNRYPLPRIDDLFDQLQGSTVFSKIDLR 570

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRDSDIPKTAFRSRYGHY+FIVMSF LTNA TVFMDLMN+VFKDFLD+FVIVF
Sbjct: 571 SGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFKDFLDSFVIVF 630

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 631 IDDILIYSKTEA 642

[Close]

BLAST of Cmc05g0133361 vs. NCBI nr
Match: KAA0032541.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.0e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY++LNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 596 VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR 655

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRD DIPKTAFRSRYGHYKF+VMSF LTNA  VFMDLMN+VFKDFLD+FVIVF
Sbjct: 656 SGYHQLRIRDGDIPKTAFRSRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVF 715

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 716 IDDILIYSKTEA 727

[Close]

BLAST of Cmc05g0133361 vs. NCBI nr
Match: TYK22443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.0e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY+KLNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 162 VSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR 221

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRD DIPKTAFRSRYGHY+F+VMSF LTNA  VFMDLMN+VFKDFLD+FVIVF
Sbjct: 222 SGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVF 281

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 282 IDDILIYSKTEA 293

[Close]

BLAST of Cmc05g0133361 vs. NCBI nr
Match: KAA0067502.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 7.0e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY+KLNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 587 VSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR 646

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRD DIPKTAFRSRYGHY+F+VMSF LTNA  VFMDLMN+VFKDFLD+FVIVF
Sbjct: 647 SGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVF 706

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 707 IDDILIYSKTEA 718

[Close]

BLAST of Cmc05g0133361 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-29
Identity = 60/112 (53.57%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 17  SMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLCSGYRQLTIRDSDIPKT 76
           S+R+CIDY+ L KV +KN+YP+PR+DDLFD+L  AT F+K+DL SGY Q+ I   D PKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 77  AFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVFIDNILVYS 129
              +RYG ++F VM F LTNA   F +LMN V  ++LD FV+V++D+++VY+
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYT 116

[Close]

BLAST of Cmc05g0133361 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-25
Identity = 56/129 (43.41%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 2   SPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLCS 61
           SP  +PV+ V KKDG+ RLC+DY+ LNK  + + +PLPRID+L  ++  A +F+ +DL S
Sbjct: 630 SPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHS 689

Query: 62  GYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVFI 121
           GY Q+ +   D  KTAF +  G Y++ VM F L NA + F   M   F+D    FV V++
Sbjct: 690 GYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYL 749

Query: 122 DNILVYSKT 131
           D+IL++S++
Sbjct: 750 DDILIFSES 756

[Close]

BLAST of Cmc05g0133361 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-25
Identity = 56/129 (43.41%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 2   SPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLCS 61
           SP  +PV+ V KKDG+ RLC+DY+ LNK  + + +PLPRID+L  ++  A +F+ +DL S
Sbjct: 656 SPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHS 715

Query: 62  GYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVFI 121
           GY Q+ +   D  KTAF +  G Y++ VM F L NA + F   M   F+D    FV V++
Sbjct: 716 GYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYL 775

Query: 122 DNILVYSKT 131
           D+IL++S++
Sbjct: 776 DDILIFSES 782

[Close]

BLAST of Cmc05g0133361 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.4e-24
Identity = 50/126 (39.68%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 7   PVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLCSGYRQL 66
           PV+FV KK+G++R+ +DYK LNK +  N YPLP I+ L  ++QG+T+F+K+DL S Y  +
Sbjct: 451 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 510

Query: 67  TIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVFIDNILV 126
            +R  D  K AFR   G ++++VM + ++ A   F   +N +  +  ++ V+ ++DNIL+
Sbjct: 511 RVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILI 570

Query: 127 YSKTEA 133
           +SK+E+
Sbjct: 571 HSKSES 576

[Close]

BLAST of Cmc05g0133361 vs. ExPASy Swiss-Prot
Match: P0CT42 (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-7 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.4e-24
Identity = 50/126 (39.68%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 7   PVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLCSGYRQL 66
           PV+FV KK+G++R+ +DYK LNK +  N YPLP I+ L  ++QG+T+F+K+DL S Y  +
Sbjct: 451 PVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLI 510

Query: 67  TIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVFIDNILV 126
            +R  D  K AFR   G ++++VM + ++ A   F   +N +  +  ++ V+ ++DNIL+
Sbjct: 511 RVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILI 570

Query: 127 YSKTEA 133
           +SK+E+
Sbjct: 571 HSKSES 576

[Close]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL
Match: A0A5A7VID9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00250 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61
Identity = 119/132 (90.15%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY++LNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 99  VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLW 158

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRDSDIPKTAFRSRYGHY+FIVMSF LTNA TVFMDLMN+VFKDFLD+FVIVF
Sbjct: 159 SGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFKDFLDSFVIVF 218

Query: 121 IDNILVYSKTEA 133
           IDNIL+YSKTEA
Sbjct: 219 IDNILIYSKTEA 230

[Close]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL
Match: A0A5A7T804 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G00700 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60
Identity = 117/132 (88.64%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGS+RLCIDY+KLNKV VKNRYPLPRIDDLFDQLQG+TVFSKIDL 
Sbjct: 511 VSPWGAPVLFVKKKDGSIRLCIDYRKLNKVTVKNRYPLPRIDDLFDQLQGSTVFSKIDLR 570

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRDSDIPKTAFRSRYGHY+FIVMSF LTNA TVFMDLMN+VFKDFLD+FVIVF
Sbjct: 571 SGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFKDFLDSFVIVF 630

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 631 IDDILIYSKTEA 642

[Close]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL
Match: A0A5A7VGL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00110 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY+KLNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 587 VSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR 646

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRD DIPKTAFRSRYGHY+F+VMSF LTNA  VFMDLMN+VFKDFLD+FVIVF
Sbjct: 647 SGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVF 706

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 707 IDDILIYSKTEA 718

[Close]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL
Match: A0A5D3DFW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00490 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY+KLNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 162 VSPWGAPVLFVKKKDGSMRLCIDYRKLNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR 221

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRD DIPKTAFRSRYGHY+F+VMSF LTNA  VFMDLMN+VFKDFLD+FVIVF
Sbjct: 222 SGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVF 281

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 282 IDDILIYSKTEA 293

[Close]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL
Match: A0A5A7SSL3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00540 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 1   MSPWGAPVLFVKKKDGSMRLCIDYKKLNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLC 60
           +SPWGAPVLFVKKKDGSMRLCIDY++LNKV VKNRYPLPRIDDLFDQLQGATVFSKIDL 
Sbjct: 596 VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR 655

Query: 61  SGYRQLTIRDSDIPKTAFRSRYGHYKFIVMSFDLTNASTVFMDLMNKVFKDFLDTFVIVF 120
           SGY QL IRD DIPKTAFRSRYGHYKF+VMSF LTNA  VFMDLMN+VFKDFLD+FVIVF
Sbjct: 656 SGYHQLRIRDGDIPKTAFRSRYGHYKFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVF 715

Query: 121 IDNILVYSKTEA 133
           ID+IL+YSKTEA
Sbjct: 716 IDDILIYSKTEA 727

The following BLAST results are available for this feature:

BLAST of Cmc05g0133361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066907.1	2.8e-61	90.15	pol protein [Cucumis melo var. makuwa]	[more]
KAA0039594.1	3.1e-60	88.64	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0032541.1	7.0e-60	87.88	pol protein [Cucumis melo var. makuwa]	[more]
TYK22443.1	7.0e-60	87.88	pol protein [Cucumis melo var. makuwa]	[more]
KAA0067502.1	7.0e-60	87.88	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0133361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	2.3e-29	53.57	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	4.4e-25	43.41	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	4.4e-25	43.41	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	8.4e-24	39.68	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT42	8.4e-24	39.68	Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VID9	1.4e-61	90.15	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00250 PE...	[more]
A0A5A7T804	1.5e-60	88.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74...	[more]
A0A5A7VGL6	3.4e-60	87.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50...	[more]
A0A5D3DFW6	3.4e-60	87.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold53...	[more]
A0A5A7SSL3	3.4e-60	87.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]

BLAST of Cmc05g0133361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..96 e-value: 9.1E-53 score: 180.7
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..131
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..131
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..131 e-value: 3.86282E-62 score: 186.262
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 11..131 e-value: 4.0E-12 score: 46.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 36..131 e-value: 9.1E-53 score: 180.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0133361.1	Cmc05g0133361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding