Cmc05g0133121 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0133121
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr05: 13627045 .. 13627455 (+)
RNA-Seq Expression	Cmc05g0133121
Synteny	Cmc05g0133121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTCAAAAATGCTTTACTTAATGGGACTCTTTCTGAAGAAGTCTATATCCAGCCACCTTATGGTACTTTTCCTCCTCATCACAAGGTGTGCCTCCTATGTCGAGCACTATATGGTTTGAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAAGTTGGATTTACTTCTAGTCCTCATGACACTGCGCTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTTTATGTTGGTGATATGATTATCACTGGTAGTGATCCACAGACCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGCCTTAAAGTCTCTCAACGCTCGGACGGGTATTTATTGTCTTAA

mRNA sequence

ATGGGTGTCAAAAATGCTTTACTTAATGGGACTCTTTCTGAAGAAGTCTATATCCAGCCACCTTATGGTACTTTTCCTCCTCATCACAAGGTGTGCCTCCTATGTCGAGCACTATATGGTTTGAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAAGTTGGATTTACTTCTAGTCCTCATGACACTGCGCTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTTTATGTTGGTGATATGATTATCACTGGTAGTGATCCACAGACCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGCCTTAAAGTCTCTCAACGCTCGGACGGGTATTTATTGTCTTAA

Coding sequence (CDS)

ATGGGTGTCAAAAATGCTTTACTTAATGGGACTCTTTCTGAAGAAGTCTATATCCAGCCACCTTATGGTACTTTTCCTCCTCATCACAAGGTGTGCCTCCTATGTCGAGCACTATATGGTTTGAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAAGTTGGATTTACTTCTAGTCCTCATGACACTGCGCTCTTTACTCGCCACACACCCCAGGGTATTGTTCTTCTTCTTCTTTATGTTGGTGATATGATTATCACTGGTAGTGATCCACAGACCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGGTCTCTCAACTACTTTCTTGGCCTTAAAGTCTCTCAACGCTCGGACGGGTATTTATTGTCTTAA

Protein sequence

MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVGFTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNYFLGLKVSQRSDGYLLS

Homology

[Close]

BLAST of Cmc05g0133121 vs. NCBI nr
Match: KAA0032244.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK22154.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 5.9e-70
Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNALLNGTLSEEVYIQPPYGTFPPHHK CLLCRALYGLKQAPRAWFATFSSTITQVG
Sbjct: 1   MDVKNALLNGTLSEEVYIQPPYGTFPPHHKACLLCRALYGLKQAPRAWFATFSSTITQVG 60

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY
Sbjct: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120

Query: 121 FLGLKVSQRSDGY 134
           FLGLKVSQRSDG+
Sbjct: 121 FLGLKVSQRSDGF 133

[Close]

BLAST of Cmc05g0133121 vs. NCBI nr
Match: KAA0060225.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 250.8 bits (639), Expect = 6.9e-63
Identity = 121/136 (88.97%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEEVY++PP GT PP HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 788 MDVKNAFLNGTLSEEVYMKPPPGTSPPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 847

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 848 FTSSPHDTALFTRHTPQGIVLLLLYVNDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 907

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RS+GYLLS
Sbjct: 908 FLGLEVSRRSNGYLLS 923

[Close]

BLAST of Cmc05g0133121 vs. NCBI nr
Match: KAA0064888.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62
Identity = 121/136 (88.97%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEEVY++PP GT  P HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 375 MDVKNAFLNGTLSEEVYMKPPSGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 434

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 435 FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 494

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RSDGYLLS
Sbjct: 495 FLGLEVSRRSDGYLLS 510

[Close]

BLAST of Cmc05g0133121 vs. NCBI nr
Match: TYK21532.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.0e-62
Identity = 121/136 (88.97%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEEVY++PP GT  P HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 774 MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 833

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 834 FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 893

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RSDGYLLS
Sbjct: 894 FLGLEVSRRSDGYLLS 909

[Close]

BLAST of Cmc05g0133121 vs. NCBI nr
Match: TYK30390.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.5e-62
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEE+Y++PP GT  P HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 1   MDVKNAFLNGTLSEEMYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 61  FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 120

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RSDGYLLS
Sbjct: 121 FLGLEVSRRSDGYLLS 136

[Close]

BLAST of Cmc05g0133121 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.6e-24
Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1    MGVKNALLNGTLSEEVYIQPPYGTFPPH--HKVCLLCRALYGLKQAPRAWFATFSSTITQ 60
            + V NA L GTL+++VY+  P G       + VC L +ALYGLKQAPRAW+    + +  
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   VGFTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSL 120
            +GF +S  DT+LF     + IV +L+YV D++ITG+DP  + +    L Q F +KD   L
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  NYFLGLKVSQRSDGYLLS 137
            +YFLG++  +   G  LS
Sbjct: 1184 HYFLGIEAKRVPTGLHLS 1201

[Close]

BLAST of Cmc05g0133121 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.8e-22
Identity = 55/138 (39.86%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 1    MGVKNALLNGTLSEEVYIQPPYGTFPPHHK--VCLLCRALYGLKQAPRAWFATFSSTITQ 60
            + V NA L GTL++EVY+  P G         VC L +A+YGLKQAPRAW+    + +  
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   VGFTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSL 120
            VGF +S  DT+LF     + I+ +L+YV D++ITG+D   +      L Q F +K+   L
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  NYFLGLKVSQRSDGYLLS 137
            +YFLG++  +   G  LS
Sbjct: 1167 HYFLGIEAKRVPQGLHLS 1184

[Close]

BLAST of Cmc05g0133121 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 99.4 bits (246), Expect = 3.4e-20
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 1    MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
            M VK A LNGTL EE+Y++ P G       VC L +A+YGLKQA R WF  F   + +  
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1060

Query: 61   FTSSPHDTALF--TRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSL 120
            F +S  D  ++   +      + +LLYV D++I   D   +++ + YL + F M DL  +
Sbjct: 1061 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1120

Query: 121  NYFLGLKVSQRSDGYLLS 137
             +F+G+++  + D   LS
Sbjct: 1121 KHFIGIRIEMQEDKIYLS 1138

[Close]

BLAST of Cmc05g0133121 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.4e-20
Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 0


Query: 1    MGVKNALLNGTLSEEVYIQPPYG--TFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQ 60
            + VK A L+G L EE+Y++ P G       H VC L ++LYGLKQAPR W+  F S +  
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   VGFTSSPHDTAL-FTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGS 120
              +  +  D  + F R +    ++LLLYV DM+I G D   I+ L+  L + F+MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  LNYFLGLKV 127
                LG+K+
Sbjct: 1041 AQQILGMKI 1049

[Close]

BLAST of Cmc05g0133121 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHK--VCLLCRALYGLKQAPRAWFATFSSTITQ 60
           M V  A LN T+ E +Y++ P G     +   V  L   +YGLKQAP  W    ++T+ +
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  VGFTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSL 120
           +GF     +  L+ R T  G + + +YV D+++    P+    ++  L + + MKDLG +
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 NYFLGLKVSQRSDG 133
           + FLGL + Q S+G
Sbjct: 121 DKFLGLNIHQSSNG 134

[Close]

BLAST of Cmc05g0133121 vs. ExPASy TrEMBL
Match: A0A5D3DEY3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00020 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.8e-70
Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNALLNGTLSEEVYIQPPYGTFPPHHK CLLCRALYGLKQAPRAWFATFSSTITQVG
Sbjct: 1   MDVKNALLNGTLSEEVYIQPPYGTFPPHHKACLLCRALYGLKQAPRAWFATFSSTITQVG 60

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY
Sbjct: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120

Query: 121 FLGLKVSQRSDGY 134
           FLGLKVSQRSDG+
Sbjct: 121 FLGLKVSQRSDGF 133

[Close]

BLAST of Cmc05g0133121 vs. ExPASy TrEMBL
Match: A0A5A7V2X4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00530 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63
Identity = 121/136 (88.97%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEEVY++PP GT PP HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 788 MDVKNAFLNGTLSEEVYMKPPPGTSPPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 847

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 848 FTSSPHDTALFTRHTPQGIVLLLLYVNDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 907

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RS+GYLLS
Sbjct: 908 FLGLEVSRRSNGYLLS 923

[Close]

BLAST of Cmc05g0133121 vs. ExPASy TrEMBL
Match: A0A5A7VBA1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002020 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.5e-63
Identity = 121/136 (88.97%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEEVY++PP GT  P HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 375 MDVKNAFLNGTLSEEVYMKPPSGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 434

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 435 FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 494

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RSDGYLLS
Sbjct: 495 FLGLEVSRRSDGYLLS 510

[Close]

BLAST of Cmc05g0133121 vs. ExPASy TrEMBL
Match: A0A5D3DD70 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00150 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.8e-63
Identity = 121/136 (88.97%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEEVY++PP GT  P HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 774 MDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 833

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 834 FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 893

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RSDGYLLS
Sbjct: 894 FLGLEVSRRSDGYLLS 909

[Close]

BLAST of Cmc05g0133121 vs. ExPASy TrEMBL
Match: A0A5D3E4B0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2254G00020 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.2e-62
Identity = 120/136 (88.24%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYGTFPPHHKVCLLCRALYGLKQAPRAWFATFSSTITQVG 60
           M VKNA LNGTLSEE+Y++PP GT  P HKVCLL RALYGLKQAPRAWFATFSSTITQ+G
Sbjct: 1   MDVKNAFLNGTLSEEMYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLG 60

Query: 61  FTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNY 120
           FTSSPHDTALFTRHTPQGIVLLLLYV DMIITG+DPQ ISDLQHYLGQHFEMKDLGSLNY
Sbjct: 61  FTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNY 120

Query: 121 FLGLKVSQRSDGYLLS 137
           FLGL+VS+RSDGYLLS
Sbjct: 121 FLGLEVSRRSDGYLLS 136

[Close]

BLAST of Cmc05g0133121 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 0


Query: 1   MGVKNALLNGTLSEEVYIQPPYG-------TFPPHHKVCLLCRALYGLKQAPRAWFATFS 60
           + + NA LNG L EE+Y++ P G       + PP + VC L +++YGLKQA R WF  FS
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPP-NAVCYLKKSIYGLKQASRQWFLKFS 252

Query: 61  STITQVGFTSSPHDTALFTRHTPQGIVLLLLYVGDMIITGSDPQTISDLQHYLGQHFEMK 120
            T+   GF  S  D   F + T    + +L+YV D+II  ++   + +L+  L   F+++
Sbjct: 253 VTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLR 312

Query: 121 DLGSLNYFLGLKVSQRSDG 133
           DLG L YFLGL++++ + G
Sbjct: 313 DLGPLKYFLGLEIARSAAG 330

[Close]

BLAST of Cmc05g0133121 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 82  LLLYVGDMIITGSDPQTISDLQHYLGQHFEMKDLGSLNYFLGLKVSQRSDGYLLS 137
           LLLYV D+++TGS    ++ L   L   F MKDLG ++YFLG+++     G  LS
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLS 57

The following BLAST results are available for this feature:

BLAST of Cmc05g0133121 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032244.1	5.9e-70	97.74	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK22154.1 putative m...	[more]
KAA0060225.1	6.9e-63	88.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0064888.1	1.5e-62	88.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK21532.1	2.0e-62	88.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK30390.1	4.5e-62	88.24	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0133121 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	6.6e-24	41.30	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.8e-22	39.86	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	3.4e-20	35.51	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	4.4e-20	40.31	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P25600	1.3e-16	32.84	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc05g0133121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEY3	2.8e-70	97.74	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7V2X4	3.4e-63	88.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VBA1	7.5e-63	88.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DD70	9.8e-63	88.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3E4B0	2.2e-62	88.24	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cmc05g0133121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.2e-22	38.13	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.3e-06	43.64	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..135 e-value: 9.6E-34 score: 117.0
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 2..130
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0133121.1	Cmc05g0133121.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding