Cmc05g0130921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0130921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr05: 9836779 .. 9837816 (-)
RNA-Seq Expression	Cmc05g0130921
Synteny	Cmc05g0130921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTAGAGCTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAGAGAAGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGGGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGATGCGCTTTGTAGGAAGGTTGCACATTCAGCAGCACTGATCACCAAACAAGCCCCCTTACTCAGAGATTTTGAGAGAGTCGAGATTGCAATCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTTTCGCTCAATTAAATAATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGCCTTACGTTTGAGGGACGCTTTTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCATTTACCATGCACTCTGAGAGTACGAAAATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAATATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTTTGTCGATGGACTTCATTATGGGACTGCCCAAGACCTTACAGGGCTATACAGTGATCTGGGTTGTTGTTGACAGGCTCACGAAGTCAGCCCACTTTGTTCCAGGAAAATCCACTTACGCTGCTAGTAAGTGGGGACAGTTATATATGACAGAGATAGTGAGACTGCATGGAGTGCCCGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAATGA

mRNA sequence

ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTAGAGCTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAGAGAAGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGGGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGATGCGCTTTGTAGGAAGGTTGCACATTCAGCAGCACTGATCACCAAACAAGCCCCCTTACTCAGAGATTTTGAGAGAGTCGAGATTGCAATCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTTTCGCTCAATTAAATAATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGCCTTACGTTTGAGGGACGCTTTTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCATTTACCATGCACTCTGAGAGTACGAAAATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAATATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTTTGTCGATGGACTTCATTATGGGACTGCCCAAGACCTTACAGGGCTATACAGTGATCTGGGTTGTTGTTGACAGGCTCACGAAGTCAGCCCACTTTGTTCCAGGAAAATCCACTTACGCTGCTAGTAAGTGGGGACAGTTATATATGACAGAGATAGTGAGACTGCATGGAGTGCCCGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAATGA

Coding sequence (CDS)

ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTAGAGCTGGCAGCAGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAGAGAAGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGGGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGATGCGCTTTGTAGGAAGGTTGCACATTCAGCAGCACTGATCACCAAACAAGCCCCCTTACTCAGAGATTTTGAGAGAGTCGAGATTGCAATCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAGCCGACCCTGAGACAGAGGATTATTTTCGCTCAATTAAATAATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGCCTTACGTTTGAGGGACGCTTTTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCATTTACCATGCACTCTGAGAGTACGAAAATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAATATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAGGTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTTTGTCGATGGACTTCATTATGGGACTGCCCAAGACCTTACAGGGCTATACAGTGATCTGGGTTGTTGTTGACAGGCTCACGAAGTCAGCCCACTTTGTTCCAGGAAAATCCACTTACGCTGCTAGTAAGTGGGGACAGTTATATATGACAGAGATAGTGAGACTGCATGGAGTGCCCGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAATGA

Protein sequence

MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

Homology

[Close]

BLAST of Cmc05g0130921 vs. NCBI nr
Match: KAA0035890.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 656.4 bits (1692), Expect = 1.4e-184
Identity = 320/345 (92.75%), Postives = 329/345 (95.36%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
           TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 560

Query: 121 VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
            EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
            FEGR CVPEDSAVK ELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
           FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 741 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 785

[Close]

BLAST of Cmc05g0130921 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 656.0 bits (1691), Expect = 1.8e-184
Identity = 319/345 (92.46%), Postives = 329/345 (95.36%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 903  MQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 962

Query: 61   TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
            TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 963  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1022

Query: 121  VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
             EI +SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 1023 AEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 1082

Query: 181  TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
             FEGR CVPEDSAVKTELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 1083 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 1142

Query: 241  LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
            LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKT +GYTVIWVVVDRLTKSAH
Sbjct: 1143 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKSAH 1202

Query: 301  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 1203 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 1247

[Close]

BLAST of Cmc05g0130921 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 656.0 bits (1691), Expect = 1.8e-184
Identity = 319/345 (92.46%), Postives = 330/345 (95.65%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
           TQKELNMRQRRWLELVKDYDC ILYHPGKANVVAD+L RKVAHSAALITKQ PLLRDFER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFER 560

Query: 121 VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
            EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
            FEGR CVPEDSAVKTELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
           FVPGKSTY ASKWGQLY+TEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 741 FVPGKSTYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWK 785

[Close]

BLAST of Cmc05g0130921 vs. NCBI nr
Match: KAA0035204.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184
Identity = 318/345 (92.17%), Postives = 330/345 (95.65%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 837  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 896

Query: 61   TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
            TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 897  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 956

Query: 121  VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
             EIA+SVGEVT+QLAQLSVQPTLRQ+II AQL +PYLVEKRR+VETGQGE+FSISSDDGL
Sbjct: 957  AEIAVSVGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGL 1016

Query: 181  TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
             FEGR CVPEDS VKTELL+EAHSSPFTMH  STKMYQDLRSVYWWRNMKREVADF+SRC
Sbjct: 1017 MFEGRLCVPEDSVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFISRC 1076

Query: 241  LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
            LVCQQVKAPRQRPAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Sbjct: 1077 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 1136

Query: 301  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWK
Sbjct: 1137 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWK 1181

[Close]

BLAST of Cmc05g0130921 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 654.4 bits (1687), Expect = 5.3e-184
Identity = 319/345 (92.46%), Postives = 329/345 (95.36%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLK HEQNYPTHDLELAAVV ALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 191 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVLALKIWRHYLYGEKIQIYTDHKSLKYFF 250

Query: 61  TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
           TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 251 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 310

Query: 121 VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
            EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 311 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 370

Query: 181 TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
            FEGR CVPEDSAVKTELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 371 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 430

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+G+TVIWVVVDRLTKSAH
Sbjct: 431 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAH 490

Query: 301 FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
           FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 491 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 535

[Close]

BLAST of Cmc05g0130921 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-37
Identity = 102/349 (29.23%), Postives = 174/349 (49.86%), Query Frame = 0


Query: 7    VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFERVE 126
               N R  RW   ++D++  I Y PG AN +ADAL R       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISS 186
            I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADF 246
             D      +  +P D+ +   ++ + H     +H     +   +   + W+ +++++ ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT 306
            V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1061

[Close]

BLAST of Cmc05g0130921 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-37
Identity = 102/349 (29.23%), Postives = 174/349 (49.86%), Query Frame = 0


Query: 7    VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFERVE 126
               N R  RW   ++D++  I Y PG AN +ADAL R       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISS 186
            I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADF 246
             D      +  +P D+ +   ++ + H     +H     +   +   + W+ +++++ ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT 306
            V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1061

[Close]

BLAST of Cmc05g0130921 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-37
Identity = 102/349 (29.23%), Postives = 174/349 (49.86%), Query Frame = 0


Query: 7    VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFERVE 126
               N R  RW   ++D++  I Y PG AN +ADAL R       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISS 186
            I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADF 246
             D      +  +P D+ +   ++ + H     +H     +   +   + W+ +++++ ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT 306
            V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1061

[Close]

BLAST of Cmc05g0130921 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-37
Identity = 102/349 (29.23%), Postives = 174/349 (49.86%), Query Frame = 0


Query: 7    VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFERVE 126
               N R  RW   ++D++  I Y PG AN +ADAL R       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISS 186
            I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADF 246
             D      +  +P D+ +   ++ + H     +H     +   +   + W+ +++++ ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT 306
            V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1061

[Close]

BLAST of Cmc05g0130921 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.6e-37
Identity = 102/349 (29.23%), Postives = 174/349 (49.86%), Query Frame = 0


Query: 7    VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE 66
            V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFERVE 126
               N R  RW   ++D++  I Y PG AN +ADAL R       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISS 186
            I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 914

Query: 187  DDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADF 246
             D      +  +P D+ +   ++ + H     +H     +   +   + W+ +++++ ++
Sbjct: 915  KD------QILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEY 974

Query: 247  VSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT 306
            V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Sbjct: 975  VQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFS 1034

Query: 307  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Sbjct: 1035 KMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWK 1061

[Close]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL
Match: A0A5A7SXW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00560 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 6.7e-185
Identity = 320/345 (92.75%), Postives = 329/345 (95.36%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
           TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 560

Query: 121 VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
            EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
            FEGR CVPEDSAVK ELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
           FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 741 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 785

[Close]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.8e-185
Identity = 319/345 (92.46%), Postives = 330/345 (95.65%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
           TQKELNMRQRRWLELVKDYDC ILYHPGKANVVAD+L RKVAHSAALITKQ PLLRDFER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFER 560

Query: 121 VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
            EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
            FEGR CVPEDSAVKTELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
           FVPGKSTY ASKWGQLY+TEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 741 FVPGKSTYTASKWGQLYVTEIVRLHGVPVSIISDRDARFTSKFWK 785

[Close]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.8e-185
Identity = 319/345 (92.46%), Postives = 329/345 (95.36%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 903  MQQGKVVAYASRQLKTHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 962

Query: 61   TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
            TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 963  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 1022

Query: 121  VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
             EI +SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 1023 AEITVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 1082

Query: 181  TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
             FEGR CVPEDSAVKTELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 1083 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 1142

Query: 241  LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
            LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKT +GYTVIWVVVDRLTKSAH
Sbjct: 1143 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTQKGYTVIWVVVDRLTKSAH 1202

Query: 301  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 1203 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 1247

[Close]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL
Match: A0A5A7SVA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00290 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.1e-184
Identity = 318/345 (92.17%), Postives = 330/345 (95.65%), Query Frame = 0


Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 837  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 896

Query: 61   TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
            TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 897  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 956

Query: 121  VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
             EIA+SVGEVT+QLAQLSVQPTLRQ+II AQL +PYLVEKRR+VETGQGE+FSISSDDGL
Sbjct: 957  AEIAVSVGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGL 1016

Query: 181  TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
             FEGR CVPEDS VKTELL+EAHSSPFTMH  STKMYQDLRSVYWWRNMKREVADF+SRC
Sbjct: 1017 MFEGRLCVPEDSVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFISRC 1076

Query: 241  LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
            LVCQQVKAPRQRPAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Sbjct: 1077 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 1136

Query: 301  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
            FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWK
Sbjct: 1137 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTRFTSKFWK 1181

[Close]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.6e-184
Identity = 319/345 (92.46%), Postives = 329/345 (95.36%), Query Frame = 0


Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLK HEQNYPTHDLELAAVV ALKIWRHYLYGEKIQI+TDHKSLKYFF
Sbjct: 191 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVLALKIWRHYLYGEKIQIYTDHKSLKYFF 250

Query: 61  TQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSAALITKQAPLLRDFER 120
           TQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RKVAHSAALITKQ PLLRDFER
Sbjct: 251 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 310

Query: 121 VEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGL 180
            EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL
Sbjct: 311 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 370

Query: 181 TFEGRFCVPEDSAVKTELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRC 240
            FEGR CVPEDSAVKTELLTEAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRC
Sbjct: 371 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 430

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+G+TVIWVVVDRLTKSAH
Sbjct: 431 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGHTVIWVVVDRLTKSAH 490

Query: 301 FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK 346
           FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Sbjct: 491 FVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWK 535

The following BLAST results are available for this feature:

BLAST of Cmc05g0130921 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035890.1	1.4e-184	92.75	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	1.8e-184	92.46	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	1.8e-184	92.46	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035204.1	2.4e-184	92.17	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0040942.1	5.3e-184	92.46	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0130921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.6e-37	29.23	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.6e-37	29.23	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.6e-37	29.23	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.6e-37	29.23	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.6e-37	29.23	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXW6	6.7e-185	92.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56...	[more]
A0A5A7TVN9	8.8e-185	92.46	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5A7V646	8.8e-185	92.46	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SVA8	1.1e-184	92.17	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7TBV4	2.6e-184	92.46	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]

BLAST of Cmc05g0130921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 154..247 e-value: 2.3E-16 score: 61.8
None	No IPR available	GENE3D	3.10.20.370		coord: 2..50 e-value: 6.0E-6 score: 28.2
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 185..345 coord: 5..108
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..101 e-value: 8.64992E-50 score: 160.736
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 5..79 e-value: 5.6E-27 score: 94.1
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 192..248 e-value: 1.4E-15 score: 57.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 257..345 e-value: 4.7E-15 score: 57.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 259..345 score: 9.756259
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 260..345
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0130921.1	Cmc05g0130921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding