Cmc05g0130111 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0130111
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr05: 8379181 .. 8380122 (+)
RNA-Seq Expression	Cmc05g0130111
Synteny	Cmc05g0130111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCATTACAGATGATAACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAAGACTTAGGCAATCTCAGCTATTTCCTTGGTCTTGAGATCTCCTCATCACCTAGTGGCTACTATCTATCTCAAGCAAAATATGCTTCTGACCTCCTTAGTCGATCTAGTATTACTGATTCAGCGATGTTCTCAACACCTCTAGATCCAAATGTGCGCCTCACCCCTTTTGATGGTGTTCCTCTTGATGATCCCACTTTGTATCGACAACTGGTTGGTAGCCTAATTTACTTAACTGTGATCCGTCTTGATATTGCATATGTGGTTCACATTGTTAGTCAGTTCATAGTTGCTCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGTTCCATTAAAGGTACTTTGGGCCATGGTCTACAGTTCTCCTCCCAATCTTCCCTAGTTCTCTCCAGCTTCTCTAATGTTGACTGGGCTGAAGATCCTACAGACAAACAGTCTACCACTGGTTATTGTTTCTATCTAGGTGATGCCCTTATCTCCTCGCGAAGCAAGAAACAATCTGTTGTTTTCTGTTCCAGCACAGAGTCTGAATATCGTGCACTAGTTGATGCCACTTCAGAATTACTATGGCTTCGTTGGTTTCTTACTGATATGGGGGCACCACAGACATCACCCACCATTCTTCATTGTGATAATCGTAGTGCTATTCAGATTGCACATAATAATGTGTTCCATGAACGAACAAAACACATTGAGAATGATTGTCACTTTGTTCGCCATCACCTCCAGAGCAACACTCTCCATCTCCAATCCATCTCCACCGCTGATCAACCTGCAGATATCTTCACCAAAGCTCATCATTCTCCTCGTTTCACCCAGTTACTTCACAAACTCAAGGTGGTCTCAACTCTCCCACCTTGA

mRNA sequence

ATGATCATTACAGATGATAACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAAGACTTAGGCAATCTCAGCTATTTCCTTGGTCTTGAGATCTCCTCATCACCTAGTGGCTACTATCTATCTCAAGCAAAATATGCTTCTGACCTCCTTAGTCGATCTAGTATTACTGATTCAGCGATGTTCTCAACACCTCTAGATCCAAATGTGCGCCTCACCCCTTTTGATGGTGTTCCTCTTGATGATCCCACTTTGTATCGACAACTGGTTGGTAGCCTAATTTACTTAACTGTGATCCGTCTTGATATTGCATATGTGGTTCACATTGTTAGTCAGTTCATAGTTGCTCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGTTCCATTAAAGGTACTTTGGGCCATGGTCTACAGTTCTCCTCCCAATCTTCCCTAGTTCTCTCCAGCTTCTCTAATGTTGACTGGGCTGAAGATCCTACAGACAAACAGTCTACCACTGGTTATTGTTTCTATCTAGGTGATGCCCTTATCTCCTCGCGAAGCAAGAAACAATCTGTTGTTTTCTGTTCCAGCACAGAGTCTGAATATCGTGCACTAGTTGATGCCACTTCAGAATTACTATGGCTTCGTTGGTTTCTTACTGATATGGGGGCACCACAGACATCACCCACCATTCTTCATTGTGATAATCGTAGTGCTATTCAGATTGCACATAATAATGTGTTCCATGAACGAACAAAACACATTGAGAATGATTGTCACTTTGTTCGCCATCACCTCCAGAGCAACACTCTCCATCTCCAATCCATCTCCACCGCTGATCAACCTGCAGATATCTTCACCAAAGCTCATCATTCTCCTCGTTTCACCCAGTTACTTCACAAACTCAAGGTGGTCTCAACTCTCCCACCTTGA

Coding sequence (CDS)

ATGATCATTACAGATGATAACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAAGACTTAGGCAATCTCAGCTATTTCCTTGGTCTTGAGATCTCCTCATCACCTAGTGGCTACTATCTATCTCAAGCAAAATATGCTTCTGACCTCCTTAGTCGATCTAGTATTACTGATTCAGCGATGTTCTCAACACCTCTAGATCCAAATGTGCGCCTCACCCCTTTTGATGGTGTTCCTCTTGATGATCCCACTTTGTATCGACAACTGGTTGGTAGCCTAATTTACTTAACTGTGATCCGTCTTGATATTGCATATGTGGTTCACATTGTTAGTCAGTTCATAGTTGCTCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGTTCCATTAAAGGTACTTTGGGCCATGGTCTACAGTTCTCCTCCCAATCTTCCCTAGTTCTCTCCAGCTTCTCTAATGTTGACTGGGCTGAAGATCCTACAGACAAACAGTCTACCACTGGTTATTGTTTCTATCTAGGTGATGCCCTTATCTCCTCGCGAAGCAAGAAACAATCTGTTGTTTTCTGTTCCAGCACAGAGTCTGAATATCGTGCACTAGTTGATGCCACTTCAGAATTACTATGGCTTCGTTGGTTTCTTACTGATATGGGGGCACCACAGACATCACCCACCATTCTTCATTGTGATAATCGTAGTGCTATTCAGATTGCACATAATAATGTGTTCCATGAACGAACAAAACACATTGAGAATGATTGTCACTTTGTTCGCCATCACCTCCAGAGCAACACTCTCCATCTCCAATCCATCTCCACCGCTGATCAACCTGCAGATATCTTCACCAAAGCTCATCATTCTCCTCGTTTCACCCAGTTACTTCACAAACTCAAGGTGGTCTCAACTCTCCCACCTTGA

Protein sequence

MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKLKVVSTLPP

Homology

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BLAST of Cmc05g0130111 vs. NCBI nr
Match: KAA0033295.1 (hypothetical protein E6C27_scaffold845G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 599.7 bits (1545), Expect = 1.4e-167
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 6   DNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDS 65
           DNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDS
Sbjct: 535 DNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDS 594

Query: 66  AMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRT 125
           AMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRT
Sbjct: 595 AMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRT 654

Query: 126 IHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDAL 185
           IHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDAL
Sbjct: 655 IHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDAL 714

Query: 186 ISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQI 245
           ISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQI
Sbjct: 715 ISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQI 774

Query: 246 AHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKL 305
           AHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKL
Sbjct: 775 AHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKL 834

Query: 306 K 307
           K
Sbjct: 835 K 835

[Close]

BLAST of Cmc05g0130111 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 1034 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 1093

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
             ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 1094 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 1153

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 1154 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 1213

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 1214 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 1273

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
            SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 1274 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 1333

Query: 301  LLHKLKVVSTLP 313
            L+HKLKVVSTLP
Sbjct: 1334 LIHKLKVVSTLP 1345

[Close]

BLAST of Cmc05g0130111 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 1002 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 1061

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
             ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 1062 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 1121

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 1122 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 1181

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 1182 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 1241

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
            SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 1242 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 1301

Query: 301  LLHKLKVVSTLP 313
            L+HKLKVVSTLP
Sbjct: 1302 LIHKLKVVSTLP 1313

[Close]

BLAST of Cmc05g0130111 vs. NCBI nr
Match: KAA0036574.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 1034 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 1093

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
             ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 1094 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 1153

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 1154 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 1213

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 1214 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 1273

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
            SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 1274 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 1333

Query: 301  LLHKLKVVSTLP 313
            L+HKLKVVSTLP
Sbjct: 1334 LIHKLKVVSTLP 1345

[Close]

BLAST of Cmc05g0130111 vs. NCBI nr
Match: TYK12316.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK28111.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1   MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
           MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 450 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 509

Query: 61  SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 510 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 569

Query: 121 VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
            APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 570 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 629

Query: 181 LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
           LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 630 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 689

Query: 241 SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
           SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 690 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 749

Query: 301 LLHKLKVVSTLP 313
           L+HKLKVVSTLP
Sbjct: 750 LIHKLKVVSTLP 761

[Close]

BLAST of Cmc05g0130111 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.5e-58
Identity = 127/312 (40.71%), Postives = 182/312 (58.33%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            ++IT ++P  + +    L + F +KD   L YFLG+E    P+G +LSQ +Y  DLL+R+
Sbjct: 1154 ILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLART 1213

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            ++  +   +TP+ P+ +L+ + G  L DPT YR +VGSL YL   R DI+Y V+ +SQF+
Sbjct: 1214 NMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFM 1273

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
              P   H  A+ RILR + GT  HG+     ++L L ++S+ DWA D  D  ST GY  Y
Sbjct: 1274 HMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVY 1333

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LG   IS  SKKQ  V  SSTE+EYR++ + +SE+ W+   LT++G   T P +++CDN 
Sbjct: 1334 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNV 1393

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
             A  +  N VFH R KHI  D HF+R+ +QS  L +  +ST DQ AD  TK      F  
Sbjct: 1394 GATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQN 1453

Query: 301  LLHKLKVVSTLP 313
               K+ V    P
Sbjct: 1454 FASKIGVTRVPP 1465

[Close]

BLAST of Cmc05g0130111 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-55
Identity = 122/312 (39.10%), Postives = 180/312 (57.69%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            ++IT ++   +      L + F +K+  +L YFLG+E    P G +LSQ +Y  DLL+R+
Sbjct: 1137 ILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLART 1196

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            ++  +   +TP+  + +LT   G  L DPT YR +VGSL YL   R D++Y V+ +SQ++
Sbjct: 1197 NMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYM 1256

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
              P   H+ A+ R+LR + GT  HG+     ++L L ++S+ DWA D  D  ST GY  Y
Sbjct: 1257 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1316

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LG   IS  SKKQ  V  SSTE+EYR++ + +SEL W+   LT++G   + P +++CDN 
Sbjct: 1317 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNV 1376

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
             A  +  N VFH R KHI  D HF+R+ +QS  L +  +ST DQ AD  TK      F  
Sbjct: 1377 GATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1436

Query: 301  LLHKLKVVSTLP 313
               K+ V+   P
Sbjct: 1437 FSRKIGVIKVPP 1448

[Close]

BLAST of Cmc05g0130111 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 159.5 bits (402), Expect = 6.4e-38
Identity = 104/309 (33.66%), Postives = 168/309 (54.37%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            ++I   +   +++ + YL + F M DL  + +F+G+ I       YLSQ+ Y   +LS+ 
Sbjct: 1091 VVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKF 1150

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTV-IRLDIAYVVHIVSQF 120
            ++ +    STPL   +     +    D  T  R L+G L+Y+ +  R D+   V+I+S++
Sbjct: 1151 NMENCNAVSTPLPSKINYELLNS-DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRY 1210

Query: 121  IVAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSL--VLSSFSNVDWAEDPTDKQSTTGY 180
                 +  +  + R+LR +KGT+   L F    +    +  + + DWA    D++STTGY
Sbjct: 1211 SSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1270

Query: 181  CFYLGD-ALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILH 240
             F + D  LI   +K+Q+ V  SSTE+EY AL +A  E LWL++ LT +     +P  ++
Sbjct: 1271 LFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIY 1330

Query: 241  CDNRSAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSP 300
             DN+  I IA+N   H+R KHI+   HF R  +Q+N + L+ I T +Q ADIFTK   + 
Sbjct: 1331 EDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAA 1390

Query: 301  RFTQLLHKL 306
            RF +L  KL
Sbjct: 1391 RFVELRDKL 1398

[Close]

BLAST of Cmc05g0130111 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-38
Identity = 107/300 (35.67%), Postives = 168/300 (56.00%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEI--SSSPSGYYLSQAKYASDLLS 60
            M+I   +   I+ L+  L K F+MKDLG     LG++I    +    +LSQ KY   +L 
Sbjct: 1012 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1071

Query: 61   RSSITDSAMFSTPLDPNVRL------TPFDGVPLDDPTLYRQLVGSLIYLTV-IRLDIAY 120
            R ++ ++   STPL  +++L      T  +         Y   VGSL+Y  V  R DIA+
Sbjct: 1072 RFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAH 1131

Query: 121  VVHIVSQFIVAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDK 180
             V +VS+F+  P   H+ AV  ILR ++GT G  L F   S  +L  +++ D A D  ++
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNR 1191

Query: 181  QSTTGYCFYLGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTS 240
            +S+TGY F      IS +SK Q  V  S+TE+EY A  +   E++WL+ FL ++G  Q  
Sbjct: 1192 KSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ-K 1251

Query: 241  PTILHCDNRSAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTK 292
              +++CD++SAI ++ N+++H RTKHI+   H++R  +   +L +  IST + PAD+ TK
Sbjct: 1252 EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309

[Close]

BLAST of Cmc05g0130111 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.9e-36
Identity = 88/217 (40.55%), Postives = 129/217 (59.45%), Query Frame = 0


Query: 1   MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
           +++T  +   ++ L   L   F MKDLG + YFLG++I + PSG +LSQ KYA  +L+ +
Sbjct: 10  ILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNA 69

Query: 61  SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            + D    STPL P    +        DP+ +R +VG+L YLT+ R DI+Y V+IV Q +
Sbjct: 70  GMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 129

Query: 121 VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             P    F  + R+LR +KGT+ HGL     S L + +F + DWA   + ++STTG+C +
Sbjct: 130 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 189

Query: 181 LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLW 218
           LG  +IS  +K+Q  V  SSTE+EYRAL    +EL W
Sbjct: 190 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc05g0130111 vs. ExPASy TrEMBL
Match: A0A5A7SVV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001050 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 6.8e-168
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 6   DNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDS 65
           DNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDS
Sbjct: 535 DNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRSSITDS 594

Query: 66  AMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRT 125
           AMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRT
Sbjct: 595 AMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFIVAPRT 654

Query: 126 IHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDAL 185
           IHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDAL
Sbjct: 655 IHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFYLGDAL 714

Query: 186 ISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQI 245
           ISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQI
Sbjct: 715 ISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNRSAIQI 774

Query: 246 AHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKL 305
           AHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKL
Sbjct: 775 AHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQLLHKL 834

Query: 306 K 307
           K
Sbjct: 835 K 835

[Close]

BLAST of Cmc05g0130111 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 1034 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 1093

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
             ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 1094 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 1153

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 1154 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 1213

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 1214 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 1273

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
            SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 1274 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 1333

Query: 301  LLHKLKVVSTLP 313
            L+HKLKVVSTLP
Sbjct: 1334 LIHKLKVVSTLP 1345

[Close]

BLAST of Cmc05g0130111 vs. ExPASy TrEMBL
Match: A0A5D3DWU7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00160 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1   MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
           MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 450 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 509

Query: 61  SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 510 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 569

Query: 121 VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
            APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 570 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 629

Query: 181 LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
           LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 630 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 689

Query: 241 SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
           SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 690 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 749

Query: 301 LLHKLKVVSTLP 313
           L+HKLKVVSTLP
Sbjct: 750 LIHKLKVVSTLP 761

[Close]

BLAST of Cmc05g0130111 vs. ExPASy TrEMBL
Match: A0A5A7SZ66 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00840 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 1034 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 1093

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
             ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 1094 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 1153

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 1154 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 1213

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 1214 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 1273

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
            SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 1274 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 1333

Query: 301  LLHKLKVVSTLP 313
            L+HKLKVVSTLP
Sbjct: 1334 LIHKLKVVSTLP 1345

[Close]

BLAST of Cmc05g0130111 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 280/312 (89.74%), Postives = 291/312 (93.27%), Query Frame = 0


Query: 1    MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
            MIIT D+PQAISDLQCYLGKHFEMKDLGNL+YFLGLEISSS SGYYLSQAKYASDLL+RS
Sbjct: 1002 MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRS 1061

Query: 61   SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
             ITDSA FSTPLDPNVRLTPFDGVPL+DPTLYRQLVGSLIYLTV R DIAY VHIVSQF+
Sbjct: 1062 GITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQFM 1121

Query: 121  VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             APRTIHFTAVLRILR IKGTLGHGLQFSSQSSLVLS FS+ DWA DPTD++STTGYCFY
Sbjct: 1122 AAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFY 1181

Query: 181  LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
            LGDALIS RSKKQSVV  SSTESEYRAL DATSEL+WLRW LTDMGAPQTSPTILHCDN 
Sbjct: 1182 LGDALISWRSKKQSVVSRSSTESEYRALADATSELIWLRWLLTDMGAPQTSPTILHCDNH 1241

Query: 241  SAIQIAHNNVFHERTKHIENDCHFVRHHLQSNTLHLQSISTADQPADIFTKAHHSPRFTQ 300
            SAIQIAHN+VFHERTKHIENDCHFVRHHLQSNTLHLQ IST DQPADIFTKA HSPRFTQ
Sbjct: 1242 SAIQIAHNDVFHERTKHIENDCHFVRHHLQSNTLHLQPISTTDQPADIFTKALHSPRFTQ 1301

Query: 301  LLHKLKVVSTLP 313
            L+HKLKVVSTLP
Sbjct: 1302 LIHKLKVVSTLP 1313

[Close]

BLAST of Cmc05g0130111 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 238.8 bits (608), Expect = 5.9e-63
Identity = 127/266 (47.74%), Postives = 173/266 (65.04%), Query Frame = 0


Query: 1   MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
           +II  +N  A+ +L+  L   F+++DLG L YFLGLEI+ S +G  + Q KYA DLL  +
Sbjct: 287 IIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDET 346

Query: 61  SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            +      S P+DP+V  +   G    D   YR+L+G L+YL + RLDI++ V+ +SQF 
Sbjct: 347 GLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFS 406

Query: 121 VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
            APR  H  AV++IL  IKGT+G GL +SSQ+ + L  FS+  +      ++ST GYC +
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466

Query: 181 LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLWLRWFLTDMGAPQTSPTILHCDNR 240
           LG +LIS +SKKQ VV  SS E+EYRAL  AT E++WL  F  ++  P + PT+L CDN 
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526

Query: 241 SAIQIAHNNVFHERTKHIENDCHFVR 267
           +AI IA N VFHERTKHIE+DCH VR
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVR 552

[Close]

BLAST of Cmc05g0130111 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 4.2e-37
Identity = 88/217 (40.55%), Postives = 129/217 (59.45%), Query Frame = 0


Query: 1   MIITDDNPQAISDLQCYLGKHFEMKDLGNLSYFLGLEISSSPSGYYLSQAKYASDLLSRS 60
           +++T  +   ++ L   L   F MKDLG + YFLG++I + PSG +LSQ KYA  +L+ +
Sbjct: 10  ILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNA 69

Query: 61  SITDSAMFSTPLDPNVRLTPFDGVPLDDPTLYRQLVGSLIYLTVIRLDIAYVVHIVSQFI 120
            + D    STPL P    +        DP+ +R +VG+L YLT+ R DI+Y V+IV Q +
Sbjct: 70  GMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 129

Query: 121 VAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSFSNVDWAEDPTDKQSTTGYCFY 180
             P    F  + R+LR +KGT+ HGL     S L + +F + DWA   + ++STTG+C +
Sbjct: 130 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 189

Query: 181 LGDALISSRSKKQSVVFCSSTESEYRALVDATSELLW 218
           LG  +IS  +K+Q  V  SSTE+EYRAL    +EL W
Sbjct: 190 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc05g0130111 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.1e-12
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 100 IYLTVIRLDIAYVVHIVSQFIVAPRTIHFTAVLRILRSIKGTLGHGLQFSSQSSLVLSSF 159
           +YLT+ R D+ + V+ +SQF  A RT    AV ++L  +KGT+G GL +S+ S L L +F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 160 SNVDWAEDPTDKQSTTGYC 179
           ++ DWA  P  ++S TG+C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc05g0130111 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033295.1	1.4e-167	100.00	hypothetical protein E6C27_scaffold845G001050 [Cucumis melo var. makuwa]	[more]
KAA0043149.1	3.0e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0065380.1	3.0e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0036574.1	3.0e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK12316.1	3.0e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc05g0130111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.5e-58	40.71	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.5e-55	39.10	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	6.4e-38	33.66	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	8.3e-38	35.67	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	5.9e-36	40.55	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc05g0130111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVV9	6.8e-168	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DG18	1.5e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DWU7	1.5e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SZ66	1.5e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VDW0	1.5e-154	89.74	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc05g0130111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.9e-63	47.74	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.2e-37	40.55	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	6.1e-12	43.04	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..72 e-value: 4.9E-11 score: 42.7
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 172..308
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 172..308
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 163..296 e-value: 5.26638E-70 score: 211.943
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 14..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0130111.1	Cmc05g0130111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding