Cmc05g0128741 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACATTAAACCATGCTCTGCTTCTATTAGCTTGCCAAATAAAAATACTTATCAAGTCTAGAACATTGGTACTGTAAAACTATCTGATACACTTATTTTGAAAGATGTCCTTTATATGCCTGACTTCACCTTCAACTTACTTTCTGTAAGTGCAATTACAAAGAAGTCATCACTCTCTGTTCAATTCTTCACTGACATTTGTATCATTCAGGACAAGTACACTTCGAAGAAGATTGGCAGTGCTAAACTCTTCCAAGGACTATACATCCTTGACCAACCCACATATTTTCCGTCCATTTGTGCTGTCACTACAAATAAAGCATCCCTATGGCACCAACGGATAGGTCATCCCTCTACTGAGACCTTAAACTCTTTACAAATTCCTTTGTTTTTAAAACCATCTACAGTAGACAAAATGGCTCATTGTACTATTTGTCCGCTGGCGAAACAAAGAAAGCTTTCCTTTACTTCTAATAACCATTTGTCTTCAAATGCTTTTGATCTAATTTATGTAGATATTTGGGGACCTTTCTCAACAGAAACATATTCTGGATATTCTTATTTTCTTACCATTGTTGATGATGCCACTCGTTACACTTGGGTCTTCATGCTCAAACTCAAATCTGACGTTATCTCCATCATACCACAGTTTTTCAAACTCATAGAGACCCAATATGGCAAAGCAATCAAGCAAGTGAGATCTGACAATGCTCCTGAACTCAAATTTACCACCTTTTTTGAACAAAAAGGAGTGATACACCAATACTCATGTGTTCAATGCCCACAGCAGAATTCTGTTGTTGAAAGAAAACATCAACATATTTTGAACACAGCCCGTGCTCTCTATTTTCAGTCTCAAGTTCCCCTAAATTTTTGGGGAGACTGCATCCTCACTGCTATTTACTTGATTAACAGAACCCCATCCAAGTTACTACAATGGAAATCCCCATTCCAGAAATTAAACAACACCATCCCTGACTACAACTCATTAAAAGTTTTTGGCTCCCTATGCTATGCATCATCACTACCTTACAACCGTTCCAAATTCTAAATCAGAGCTATTCCTTCTGTCTTC GACATTAAACCATGCTCTGCTTCTATTAGCTTGCCAAATAAAAATACTTATCAAGTCTAGAACATTGGTACTGTAAAACTATCTGATACACTTATTTTGAAAGATGTCCTTTATATGCCTGACTTCACCTTCAACTTACTTTCTGTAAGTGCAATTACAAAGAAGTCATCACTCTCTGTTCAATTCTTCACTGACATTTGTATCATTCAGGACAAGTACACTTCGAAGAAGATTGGCAGTGCTAAACTCTTCCAAGGACTATACATCCTTGACCAACCCACATATTTTCCGTCCATTTGTGCTGTCACTACAAATAAAGCATCCCTATGGCACCAACGGATAGATATTTGGGGACCTTTCTCAACAGAAACATATTCTGGATATTCTTATTTTCTTACCATTGTTGATGATGCCACTCGTTACACTTGGGTCTTCATGCTCAAACTCAAATCTGACGTTATCTCCATCATACCACAGTTTTTCAAACTCATAGAGACCCAATATGGCAAAGCAATCAAGCAAGTGAGATCTGACAATGCTCCTGAACTCAAATTTACCACCTTTTTTGAACAAAAAGGAGTGATACACCAATACTCATGTGTTCAATGCCCACAGCAGAATTCTGTTGTTGAAAGAAAACATCAACATATTTTGAACACAGCCCGTGCTCTCTATTTTCAGTCTCAAGTTCCCCTAAATTTTTGGGGAGACTGCATCCTCACTGCTATTTACTTGATTAACAGAACCCCATCCAAGTTACTACAATGGAAATCCCCATTCCAGAAATTAAACAACACCATCCCTGACTACAACTCATTAAAAGTTTTTGGCTCCCTATGCTATGCATCATCACTACCTTACAACCGTTCCAAATTCTAAATCAGAGCTATTCCTTCTGTCTTC ATGCCTGACTTCACCTTCAACTTACTTTCTGTAAGTGCAATTACAAAGAAGTCATCACTCTCTGTTCAATTCTTCACTGACATTTGTATCATTCAGGACAAGTACACTTCGAAGAAGATTGGCAGTGCTAAACTCTTCCAAGGACTATACATCCTTGACCAACCCACATATTTTCCGTCCATTTGTGCTGTCACTACAAATAAAGCATCCCTATGGCACCAACGGATAGATATTTGGGGACCTTTCTCAACAGAAACATATTCTGGATATTCTTATTTTCTTACCATTGTTGATGATGCCACTCGTTACACTTGGGTCTTCATGCTCAAACTCAAATCTGACGTTATCTCCATCATACCACAGTTTTTCAAACTCATAGAGACCCAATATGGCAAAGCAATCAAGCAAGTGAGATCTGACAATGCTCCTGAACTCAAATTTACCACCTTTTTTGAACAAAAAGGAGTGATACACCAATACTCATGTGTTCAATGCCCACAGCAGAATTCTGTTGTTGAAAGAAAACATCAACATATTTTGAACACAGCCCGTGCTCTCTATTTTCAGTCTCAAGTTCCCCTAAATTTTTGGGGAGACTGCATCCTCACTGCTATTTACTTGATTAACAGAACCCCATCCAAGTTACTACAATGGAAATCCCCATTCCAGAAATTAAACAACACCATCCCTGACTACAACTCATTAAAAGTTTTTGGCTCCCTATGCTATGCATCATCACTACCTTACAACCGTTCCAAATTCTAA MPDFTFNLLSVSAITKKSSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF Homology
BLAST of Cmc05g0128741 vs. NCBI nr
Match: KAA0031937.1 (retroelement pol polyprotein-like [Cucumis melo var. makuwa]) HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Cmc05g0128741 vs. NCBI nr
Match: TYK16758.1 (Copia protein [Cucumis melo var. makuwa]) HSP 1 Score: 463.0 bits (1190), Expect = 1.7e-126 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cmc05g0128741 vs. NCBI nr
Match: KAA0068025.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108 Identity = 207/294 (70.41%), Postives = 218/294 (74.15%), Query Frame = 0
BLAST of Cmc05g0128741 vs. NCBI nr
Match: TYK18103.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108 Identity = 207/294 (70.41%), Postives = 218/294 (74.15%), Query Frame = 0
BLAST of Cmc05g0128741 vs. NCBI nr
Match: KAA0042148.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa] >TYK26723.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 292.7 bits (748), Expect = 3.0e-75 Identity = 159/274 (58.03%), Postives = 179/274 (65.33%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 8.0e-31 Identity = 70/178 (39.33%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.7e-29 Identity = 70/178 (39.33%), Postives = 93/178 (52.25%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.5e-29 Identity = 64/180 (35.56%), Postives = 102/180 (56.67%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 100.1 bits (248), Expect = 3.7e-20 Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy Swiss-Prot
Match: P47024 (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-J PE=3 SV=3) HSP 1 Score: 60.1 bits (144), Expect = 4.3e-08 Identity = 40/149 (26.85%), Postives = 71/149 (47.65%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy TrEMBL
Match: A0A5A7SRC2 (Retroelement pol polyprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00130 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 9.5e-128 Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy TrEMBL
Match: A0A5D3CZP1 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00100 PE=4 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 8.1e-127 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy TrEMBL
Match: A0A5D3D1N3 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00250 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 5.8e-109 Identity = 207/294 (70.41%), Postives = 218/294 (74.15%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy TrEMBL
Match: A0A5A7VQN7 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002210 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 5.8e-109 Identity = 207/294 (70.41%), Postives = 218/294 (74.15%), Query Frame = 0
BLAST of Cmc05g0128741 vs. ExPASy TrEMBL
Match: A0A5D3DT02 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00070 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.4e-75 Identity = 159/274 (58.03%), Postives = 179/274 (65.33%), Query Frame = 0
BLAST of Cmc05g0128741 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 6.5e-04 Identity = 18/65 (27.69%), Postives = 35/65 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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