Cmc05g0128561 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0128561
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Nuclear/nucleolar GTPase 2
Location	CMiso1.1chr05: 6155860 .. 6157676 (+)
RNA-Seq Expression	Cmc05g0128561
Synteny	Cmc05g0128561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGGCATAGTGCCGCCACGGTGCGACGACTCAAGATGTATAATACGAGGCCAAAGCGTGATCGGAAAGGAAAGGTGTTGAAGAATGACCTTCAGTCGAATGAGTTACCTGACACACGAATTCAACCCGATCGCCGCTGGTTCGGTATGTTCTTATTGATTTGTGTTTTATATGCTTGCAATATTTCATTTCCTACTTTTCTATTTCAATTGCTTGGTTCTTTTAGTTAGCTTTTTTGTCCCACACGTTGAGAGAAGCACATAAAAGGGTTCCTTGGGGGGCATGAAAATGTTGTTCTTGGTTGAGATTGTAGGAAAAAAGTGACCGTCAGGTTGGAGTGGCATGTTTACAAGCTGATTAGCGGATCGTTTGAACGTTTTGTGTTGATTTAACAAATGGGGGAGAAATTTTCGGAGTCCACCAGAACAATGGGGCACAACGTTGGATGAGAGTAACTTGCAAGATGGATTTCATACTGTTATTAGGAATTTAGGGGCATGTGGGTTTTTGGACTTTTAGTCAATGCTTATTGGGAGCTCTCACAGTGGCCTCATTCGATCATTTTTCCAGATGGTGTCATGCCTACATTTCTCTCCTTGTTCATTATTTAATGAACTTGTATTCTGAATGCTACTGTATTGTGTTGTGATAAGATTTTGGAGAGGAAGCATAATGATCTGTATTTACTTGAATTGATAGGGAATACCCGAGTTGTAAACTAGAAAGAGCTCAAAATTTTCCGTGAAGAGCTTGAAAAACGGATGTCAAGTAGCTATAATGTGATGTTGAAGGAAAGGAAGCTGCCCCTTTCCCTGTTGAATGACCATCAGAAGGTAGGTCTTTTCTAAAATTTGTTGATTTGAAGTGTTTTTAGGTTAACTTTCTTTTATAGATAAGGTTTATTTATACACATATTTTACACCACTGTTGCCAATGTTCTTAGCTGTTGTATCGTTTTTTTTTTTTATCAAAACTTGACAAAAGAAAGGTTGTCCAATGCCTGTTGAGTGTGTTAGTGTTGTTATCTCTCACCTTCCCACCTGATCTTACTCACTGATTCATATAGTAGATGAAGCTTTGAATGCTCTATGACATCATTATGTATGCTAAGACAATCATCCATTATGGTATCTTGTTATAAGAGAATTATGTTACTAAGGAAGACAAGTTATATTTCCTTTGATAGTGTTCTCTTGTATGTCCTTGGATTATTTCATTCATCAATGAGATTGTTTATTATAAAAAATCAATATATATTTTTTTCTTTCAATTTTTTTTTGTTGCCATCACCGATGTTAAAAGTGCTATTTTTCCTATTGCCTATTCTTTATTCTTTAGATGACTTTGAGGAAAAGTATGCTGAAAACGTTACTGTAGAGGGAAGCGAAGAAGATGGTTTTAGAGACCTAGTTCGACATACTATGTTTGAGAAGGGTCAAAGTAAACGTATATGGGGTGAGCTCTACAAAGTAATCGATTCTTCAGATGTTGTTGTCCAGGTTTGTTGTAAATATTGTAACTATTATTCCTAAATGTTGTTTACCTTATTTCTTGTTTGGAAAGAAACGTCTTCAAATAGTTTGCACAGCTGCATATTATTACATTTTACATGTTAAACTTCTTATCTTTTTCCTTCCGTGTCAGAATTGTGTTGTGTTACCCTGCAACTTAATACAAAAGCCCCTATCATTTCTTGCATTTCCATTCGACTTCTCTTCTGATTATTTGTCATTGTTTTAGGTTCTAGATGCAAGAGATCCACAAGGAACAAGGTGTTACCATTTAGAGAGACATTAGAAAGAGCATTGCAAGC

mRNA sequence

ATGAATGGGCATAGTGCCGCCACGGTGCGACGACTCAAGATGTATAATACGAGGCCAAAGCGTGATCGGAAAGGAAAGGTGTTGAAGAATGACCTTCAGTCGAATGAGTTACCTGACACACGAATTCAACCCGATCGCCGCTGGTTCGGTATGTTCTTATTGATTTGTCTCAAAATTTTCCGTGAAGAGCTTGAAAAACGGATGTCAAGTAGCTATAATGTGATGTTGAAGGAAAGGAAGCTGCCCCTTTCCCTGTTGAATGACCATCAGAAGAGAATTATGTTACTAAGGAAGACAAGTTATATTTCCTTTGATAGTGTTCTCTTGTATGTCCTTGGATTATTTCATTCATCAATGAGATTGTTTATTATAAAAAATCAATATATATTTTTTTCTTTCAATTTTTTTTTGTTGCCATCACCGATGTTAAAAGTGCTATTTTTCCTATTGCCTATTCTTTATTCTTTAGATGACTTTGAGGAAAAGTATGCTGAAAACGTTACTGTAGAGGGAAGCGAAGAAGATGGTTTTAGAGACCTAGTTCGACATACTATGTTTGAGAAGGGTCAAAGTAAACGTATATGGGGTGAGCTCTACAAAGTAATCGATTCTTCAGATGTTGTTGTCCAGGTTCTAGATGCAAGAGATCCACAAGGAACAAGGTGTTACCATTTAGAGAGACATTAGAAAGAGCATTGCAAGC

Coding sequence (CDS)

ATGAATGGGCATAGTGCCGCCACGGTGCGACGACTCAAGATGTATAATACGAGGCCAAAGCGTGATCGGAAAGGAAAGGTGTTGAAGAATGACCTTCAGTCGAATGAGTTACCTGACACACGAATTCAACCCGATCGCCGCTGGTTCGGTATGTTCTTATTGATTTGTCTCAAAATTTTCCGTGAAGAGCTTGAAAAACGGATGTCAAGTAGCTATAATGTGATGTTGAAGGAAAGGAAGCTGCCCCTTTCCCTGTTGAATGACCATCAGAAGAGAATTATGTTACTAAGGAAGACAAGTTATATTTCCTTTGATAGTGTTCTCTTGTATGTCCTTGGATTATTTCATTCATCAATGAGATTGTTTATTATAAAAAATCAATATATATTTTTTTCTTTCAATTTTTTTTTGTTGCCATCACCGATGTTAAAAGTGCTATTTTTCCTATTGCCTATTCTTTATTCTTTAGATGACTTTGAGGAAAAGTATGCTGAAAACGTTACTGTAGAGGGAAGCGAAGAAGATGGTTTTAGAGACCTAGTTCGACATACTATGTTTGAGAAGGGTCAAAGTAAACGTATATGGGGTGAGCTCTACAAAGTAATCGATTCTTCAGATGTTGTTGTCCAGGTTCTAGATGCAAGAGATCCACAAGGAACAAGGTGTTACCATTTAGAGAGACATTAG

Protein sequence

MNGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLICLKIFREELEKRMSSSYNVMLKERKLPLSLLNDHQKRIMLLRKTSYISFDSVLLYVLGLFHSSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH

Homology

[Close]

BLAST of Cmc05g0128561 vs. NCBI nr
Match: TYK01950.1 (nuclear/nucleolar GTPase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 276.9 bits (707), Expect = 1.5e-70
Identity = 160/232 (68.97%), Postives = 168/232 (72.41%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           NG SAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFG   ++    L+
Sbjct: 30  NGRSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGNTRVVNQKELE 89

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
           IFREELEKRMSSSYNV+LKERKLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 90  IFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 149

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y                    L     S DDFEEKYAEN TVEGSEEDG
Sbjct: 150 KRKRPKLLAADY-----------------ESLLQKADKSHDDFEEKYAENATVEGSEEDG 209

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 210 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 237

[Close]

BLAST of Cmc05g0128561 vs. NCBI nr
Match: XP_004142347.1 (nuclear/nucleolar GTPase 2 [Cucumis sativus] >KGN52399.1 hypothetical protein Csa_008867 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 3.4e-70
Identity = 159/232 (68.53%), Postives = 168/232 (72.41%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           NG +AATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFG   ++    L+
Sbjct: 30  NGRTAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGNTRVVNQKELE 89

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
           IFREELEKRMSSSYNV+LKERKLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 90  IFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 149

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y                    L     S DDFEEKYAEN TVEGSEEDG
Sbjct: 150 KRKRPKLLAADY-----------------ESLLQKADKSHDDFEEKYAENATVEGSEEDG 209

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 210 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 237

[Close]

BLAST of Cmc05g0128561 vs. NCBI nr
Match: XP_038890331.1 (nuclear/nucleolar GTPase 2 [Benincasa hispida] >XP_038890332.1 nuclear/nucleolar GTPase 2 [Benincasa hispida])

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-69
Identity = 157/232 (67.67%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           NG SAATVRRLKMYNTRPKRDRKGKVLKN+LQS ELPDTRIQPDRRWFG   ++    L+
Sbjct: 29  NGRSAATVRRLKMYNTRPKRDRKGKVLKNELQSKELPDTRIQPDRRWFGNTRVVNQKELE 88

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
           IFREELEKRMSSSYNV+LKERKLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 89  IFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 148

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y                    L     S DDFEEKYAEN T+EGSEEDG
Sbjct: 149 KRKRPKLLAADY-----------------ESLLQKADKSHDDFEEKYAENATIEGSEEDG 208

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 209 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 236

[Close]

BLAST of Cmc05g0128561 vs. NCBI nr
Match: XP_023550727.1 (nuclear/nucleolar GTPase 2 [Cucurbita pepo subsp. pepo] >XP_023550729.1 nuclear/nucleolar GTPase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-66
Identity = 152/232 (65.52%), Postives = 166/232 (71.55%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           N  SAATVRRLKMYNTRPKRDRKGKVLK++LQS ELPDTRIQPDRRWFG   ++    L+
Sbjct: 29  NARSAATVRRLKMYNTRPKRDRKGKVLKHELQSKELPDTRIQPDRRWFGNTRVVNQKELE 88

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
            FREEL+KRMSSSYNV+LKE+KLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 89  FFREELQKRMSSSYNVILKEKKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 148

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y             +LK          S DDF+EKYAEN T EGSEEDG
Sbjct: 149 KRKRPKLLAADY-----------ESLLK------KADKSHDDFDEKYAENATNEGSEEDG 208

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 209 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 236

[Close]

BLAST of Cmc05g0128561 vs. NCBI nr
Match: XP_022993572.1 (nuclear/nucleolar GTPase 2 [Cucurbita maxima] >XP_022993573.1 nuclear/nucleolar GTPase 2 [Cucurbita maxima] >XP_022993574.1 nuclear/nucleolar GTPase 2 [Cucurbita maxima])

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-66
Identity = 152/232 (65.52%), Postives = 166/232 (71.55%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           N  SAATVRRLKMYNTRPKRDRKGKVLK++LQS ELPDTRIQPDRRWFG   ++    L+
Sbjct: 29  NARSAATVRRLKMYNTRPKRDRKGKVLKHELQSKELPDTRIQPDRRWFGNTRVVNQKELE 88

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
            FREEL+KRMSSSYNV+LKE+KLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 89  FFREELQKRMSSSYNVILKEKKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 148

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y             +LK          S DDF+EKYAEN T EGSEEDG
Sbjct: 149 KRKRPKLLAADY-----------ESLLK------KADKSHDDFDEKYAENATNEGSEEDG 208

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 209 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 236

[Close]

BLAST of Cmc05g0128561 vs. ExPASy Swiss-Prot
Match: A2XGQ1 (Nuclear/nucleolar GTPase 2 OS=Oryza sativa subsp. indica OX=39946 GN=NUG2 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56
Identity = 129/233 (55.36%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 3   GHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LKI 62
           G SAATVRRLKMY  RP RDR GK+LK+DLQS ELP+TRI+PDRRWFG   ++    L+ 
Sbjct: 40  GRSAATVRRLKMYKMRPLRDRGGKILKHDLQSKELPNTRIEPDRRWFGNTRVVNQKELEF 99

Query: 63  FREELEKRMSSSYNVMLKERKLPLSLLNDHQKRIMLLRKTSYISFDSVLLYVLGLFHSSM 122
           FREEL+ R+S++YNV+LKERKLPLSLL DHQK     +  +++       +  G      
Sbjct: 100 FREELQSRLSNNYNVILKERKLPLSLLQDHQK-----QARAHLLDTEPFEHAFGPKGKRK 159

Query: 123 RLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDD----FEEKYAENVTVEGSEED 182
           R                    P L  L +   +L   DD    FE+K+A    ++  EED
Sbjct: 160 R--------------------PKLMALDY-ESLLKKADDSQGAFEDKHATAKLLKEEEED 219

Query: 183 GFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           G RDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDP GTRCYHLE+H
Sbjct: 220 GLRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKH 246

[Close]

BLAST of Cmc05g0128561 vs. ExPASy Swiss-Prot
Match: Q10LF7 (Nuclear/nucleolar GTPase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NUG2 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56
Identity = 129/233 (55.36%), Postives = 153/233 (65.67%), Query Frame = 0


Query: 3   GHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LKI 62
           G SAATVRRLKMY  RP RDR GK+LK+DLQS ELP+TRI+PDRRWFG   ++    L+ 
Sbjct: 40  GRSAATVRRLKMYKMRPLRDRGGKILKHDLQSKELPNTRIEPDRRWFGNTRVVNQKELEF 99

Query: 63  FREELEKRMSSSYNVMLKERKLPLSLLNDHQKRIMLLRKTSYISFDSVLLYVLGLFHSSM 122
           FREEL+ R+S++YNV+LKERKLPLSLL DHQK     +  +++       +  G      
Sbjct: 100 FREELQSRLSNNYNVILKERKLPLSLLQDHQK-----QARAHLLDTEPFEHAFGPKGKRK 159

Query: 123 RLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDD----FEEKYAENVTVEGSEED 182
           R                    P L  L +   +L   DD    FE+K+A    ++  EED
Sbjct: 160 R--------------------PKLMALDY-ESLLKKADDSQGAFEDKHATAKLLKEEEED 219

Query: 183 GFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           G RDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDP GTRCYHLE+H
Sbjct: 220 GLRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKH 246

[Close]

BLAST of Cmc05g0128561 vs. ExPASy Swiss-Prot
Match: Q9C923 (Nuclear/nucleolar GTPase 2 OS=Arabidopsis thaliana OX=3702 GN=NUG2 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51
Identity = 121/229 (52.84%), Postives = 149/229 (65.07%), Query Frame = 0


Query: 5   SAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LKIFR 64
           S +TV RLKMY TRPKR+  GK+L N+ QS ELP++RI PDRRWFG   ++    L+ FR
Sbjct: 34  SKSTVNRLKMYKTRPKRNAGGKILSNEYQSKELPNSRIAPDRRWFGNTRVVNQKELEYFR 93

Query: 65  EELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFHSSM 124
           EEL+ +MSS+YNV+LKERKLP+SLL D++K  R+ LL    +           G      
Sbjct: 94  EELQTKMSSNYNVILKERKLPMSLLTDNKKQSRVHLLDMEPFQD-------AFGRKTKRK 153

Query: 125 RLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVE-GSEEDGFR 184
           R  ++ + Y             ++K          S D FEEK     + E G EEDGFR
Sbjct: 154 RPKLVASDY-----------EALVK------KAAESQDAFEEKNGAGPSGEGGEEEDGFR 213

Query: 185 DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLER 228
           DLVRHTMFEKGQSKRIWGELYKVIDSSDV+VQV+DARDPQGTRC+HLE+
Sbjct: 214 DLVRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEK 238

[Close]

BLAST of Cmc05g0128561 vs. ExPASy Swiss-Prot
Match: Q99LH1 (Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 6.9e-26
Identity = 87/237 (36.71%), Postives = 129/237 (54.43%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKN-DLQSNELPDT--RIQPDRRWFGMFLLI--- 61
           N     T+RRL MY  + +R+ +GKV+K    QS     T  R++P+ +WFG   +I   
Sbjct: 31  NMRDRGTIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQA 90

Query: 62  CLKIFREELEKRMSSSYNVMLKERKLPLSLLND----HQKRIMLLRKTSYISFDSVLLYV 121
            L+ F+EE++K M   Y V++K+ KLP+SLL+D    H  ++ +L   S+ S        
Sbjct: 91  SLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTESFES-------- 150

Query: 122 LGLFHSSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEG 181
                 S R    K   +F S    LL +  +           S + +++    ++ +  
Sbjct: 151 -TFGPKSQR----KRPNLFASDMQSLLENAEM-----------STESYDQGKDRDLVM-- 210

Query: 182 SEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
            E+ G R+  +  +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR  H+E +
Sbjct: 211 -EDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAY 240

[Close]

BLAST of Cmc05g0128561 vs. ExPASy Swiss-Prot
Match: Q13823 (Nucleolar GTP-binding protein 2 OS=Homo sapiens OX=9606 GN=GNL2 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.7e-25
Identity = 84/237 (35.44%), Postives = 129/237 (54.43%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKN-DLQSNELPDT--RIQPDRRWFGMFLLI--- 61
           N    AT+RRL MY  + +R+ +GK++K    QS     T  R++P+ +WFG   +I   
Sbjct: 31  NMRDRATIRRLNMYRQKERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQS 90

Query: 62  CLKIFREELEKRMSSSYNVMLKERKLPLSLLND----HQKRIMLLRKTSYISFDSVLLYV 121
            L+ F+EE++  M   Y V++K+ KLP+SLL+D    H  ++ +L   S+ +        
Sbjct: 91  SLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHILDTESFET-------- 150

Query: 122 LGLFHSSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEG 181
                 S R    K   +F S    L+ +  +           S + +++    ++    
Sbjct: 151 -TFGPKSQR----KRPNLFASDMQSLIENAEM-----------STESYDQGKDRDLV--- 210

Query: 182 SEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           +E+ G R+  +  +++KGQSKRIWGELYKVIDSSDVVVQVLDARDP GTR  H+E +
Sbjct: 211 TEDTGVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETY 240

[Close]

BLAST of Cmc05g0128561 vs. ExPASy TrEMBL
Match: A0A5D3BS64 (Nuclear/nucleolar GTPase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00410 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.3e-71
Identity = 160/232 (68.97%), Postives = 168/232 (72.41%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           NG SAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFG   ++    L+
Sbjct: 30  NGRSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGNTRVVNQKELE 89

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
           IFREELEKRMSSSYNV+LKERKLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 90  IFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 149

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y                    L     S DDFEEKYAEN TVEGSEEDG
Sbjct: 150 KRKRPKLLAADY-----------------ESLLQKADKSHDDFEEKYAENATVEGSEEDG 209

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 210 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 237

[Close]

BLAST of Cmc05g0128561 vs. ExPASy TrEMBL
Match: A0A0A0KTZ3 (Nuclear/nucleolar GTPase 2 OS=Cucumis sativus OX=3659 GN=Csa_5G631500 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.6e-70
Identity = 159/232 (68.53%), Postives = 168/232 (72.41%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           NG +AATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFG   ++    L+
Sbjct: 30  NGRTAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGNTRVVNQKELE 89

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
           IFREELEKRMSSSYNV+LKERKLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 90  IFREELEKRMSSSYNVILKERKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 149

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y                    L     S DDFEEKYAEN TVEGSEEDG
Sbjct: 150 KRKRPKLLAADY-----------------ESLLQKADKSHDDFEEKYAENATVEGSEEDG 209

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 210 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 237

[Close]

BLAST of Cmc05g0128561 vs. ExPASy TrEMBL
Match: A0A6J1K2N0 (Nuclear/nucleolar GTPase 2 OS=Cucurbita maxima OX=3661 GN=LOC111489529 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.9e-67
Identity = 152/232 (65.52%), Postives = 166/232 (71.55%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           N  SAATVRRLKMYNTRPKRDRKGKVLK++LQS ELPDTRIQPDRRWFG   ++    L+
Sbjct: 29  NARSAATVRRLKMYNTRPKRDRKGKVLKHELQSKELPDTRIQPDRRWFGNTRVVNQKELE 88

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
            FREEL+KRMSSSYNV+LKE+KLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 89  FFREELQKRMSSSYNVILKEKKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 148

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y             +LK          S DDF+EKYAEN T EGSEEDG
Sbjct: 149 KRKRPKLLAADY-----------ESLLK------KADKSHDDFDEKYAENATNEGSEEDG 208

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 209 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 236

[Close]

BLAST of Cmc05g0128561 vs. ExPASy TrEMBL
Match: A0A6J1FGU6 (Nuclear/nucleolar GTPase 2 OS=Cucurbita moschata OX=3662 GN=LOC111445557 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.2e-66
Identity = 150/232 (64.66%), Postives = 165/232 (71.12%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           N  SAATVRRLKMYNTRP+RDRKGKVLK++LQS ELPDTRIQPDRRWFG   ++    L+
Sbjct: 29  NARSAATVRRLKMYNTRPRRDRKGKVLKHELQSKELPDTRIQPDRRWFGNTRVVNQKELE 88

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
            FREEL+KRMSSSYNV+LKE+KLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 89  FFREELQKRMSSSYNVILKEKKLPLSLLNDHQKQSRVHLLDTEPFQD-------AFGPKG 148

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y             +LK          S DDF+EKYAEN T EG EEDG
Sbjct: 149 KRKRPKLLAADY-----------ESLLK------KADKSHDDFDEKYAENATNEGGEEDG 208

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 209 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 236

[Close]

BLAST of Cmc05g0128561 vs. ExPASy TrEMBL
Match: A0A6J1C0B4 (Nuclear/nucleolar GTPase 2 OS=Momordica charantia OX=3673 GN=LOC111006286 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.7e-64
Identity = 147/232 (63.36%), Postives = 161/232 (69.40%), Query Frame = 0


Query: 2   NGHSAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LK 61
           N  SAATVRRLKMYNTRPKRDRKGKVLKN+LQS ELPDTRIQPDRRWFG   ++    L+
Sbjct: 29  NSRSAATVRRLKMYNTRPKRDRKGKVLKNELQSKELPDTRIQPDRRWFGNTRVVNQKELE 88

Query: 62  IFREELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFH 121
            FREEL+KRMS SYNV+LKE+KLPLSLLNDHQK  R+ LL    +           G   
Sbjct: 89  FFREELQKRMSCSYNVILKEKKLPLSLLNDHQKQSRVHLLDTEPFED-------AFGPKG 148

Query: 122 SSMRLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVEGSEEDG 181
              R  ++   Y             +LK          S D FEE +A+N T EGSE DG
Sbjct: 149 KRKRPKLLAADY-----------ESLLK------KADKSHDAFEENHADNATAEGSEGDG 208

Query: 182 FRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           FRDLVRH MFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH
Sbjct: 209 FRDLVRHNMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 236

[Close]

BLAST of Cmc05g0128561 vs. TAIR 10
Match: AT1G52980.1 (GTP-binding family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52
Identity = 121/229 (52.84%), Postives = 149/229 (65.07%), Query Frame = 0


Query: 5   SAATVRRLKMYNTRPKRDRKGKVLKNDLQSNELPDTRIQPDRRWFGMFLLIC---LKIFR 64
           S +TV RLKMY TRPKR+  GK+L N+ QS ELP++RI PDRRWFG   ++    L+ FR
Sbjct: 34  SKSTVNRLKMYKTRPKRNAGGKILSNEYQSKELPNSRIAPDRRWFGNTRVVNQKELEYFR 93

Query: 65  EELEKRMSSSYNVMLKERKLPLSLLNDHQK--RIMLLRKTSYISFDSVLLYVLGLFHSSM 124
           EEL+ +MSS+YNV+LKERKLP+SLL D++K  R+ LL    +           G      
Sbjct: 94  EELQTKMSSNYNVILKERKLPMSLLTDNKKQSRVHLLDMEPFQD-------AFGRKTKRK 153

Query: 125 RLFIIKNQYIFFSFNFFLLPSPMLKVLFFLLPILYSLDDFEEKYAENVTVE-GSEEDGFR 184
           R  ++ + Y             ++K          S D FEEK     + E G EEDGFR
Sbjct: 154 RPKLVASDY-----------EALVK------KAAESQDAFEEKNGAGPSGEGGEEEDGFR 213

Query: 185 DLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLER 228
           DLVRHTMFEKGQSKRIWGELYKVIDSSDV+VQV+DARDPQGTRC+HLE+
Sbjct: 214 DLVRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEK 238

[Close]

BLAST of Cmc05g0128561 vs. TAIR 10
Match: AT3G07050.1 (GTP-binding family protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-07
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 156 LDDFEEKYAENVTVEGSEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDAR 215
           L D E+   E  T+E        DL +         +  + EL KVI+ SDV+++VLDAR
Sbjct: 96  LVDDEDTKTEGETIE--------DLPKVVNVRDNSERAFYKELVKVIELSDVILEVLDAR 155

Query: 216 DPQGTRCYHLER 228
           DP GTRC  +ER
Sbjct: 156 DPLGTRCTDMER 159

[Close]

BLAST of Cmc05g0128561 vs. TAIR 10
Match: AT1G08410.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 184 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           T FEK     IW +L++V++ SD++V V+DARDP   RC  LE +
Sbjct: 149 TPFEKNLD--IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAY 191

[Close]

BLAST of Cmc05g0128561 vs. TAIR 10
Match: AT2G27200.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 184 TMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLERH 229
           T FEK     IW +L++V++ SD++V V+DARDP   RC  LE +
Sbjct: 149 TPFEKNLD--IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAY 191

The following BLAST results are available for this feature:

BLAST of Cmc05g0128561 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01950.1	1.5e-70	68.97	nuclear/nucleolar GTPase 2 [Cucumis melo var. makuwa]	[more]
XP_004142347.1	3.4e-70	68.53	nuclear/nucleolar GTPase 2 [Cucumis sativus] >KGN52399.1 hypothetical protein Cs...	[more]
XP_038890331.1	2.9e-69	67.67	nuclear/nucleolar GTPase 2 [Benincasa hispida] >XP_038890332.1 nuclear/nucleolar...	[more]
XP_023550727.1	1.0e-66	65.52	nuclear/nucleolar GTPase 2 [Cucurbita pepo subsp. pepo] >XP_023550729.1 nuclear/...	[more]
XP_022993572.1	1.0e-66	65.52	nuclear/nucleolar GTPase 2 [Cucurbita maxima] >XP_022993573.1 nuclear/nucleolar ...	[more]

BLAST of Cmc05g0128561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XGQ1	1.7e-56	55.36	Nuclear/nucleolar GTPase 2 OS=Oryza sativa subsp. indica OX=39946 GN=NUG2 PE=3 S...	[more]
Q10LF7	1.7e-56	55.36	Nuclear/nucleolar GTPase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NUG2 PE=1...	[more]
Q9C923	2.1e-51	52.84	Nuclear/nucleolar GTPase 2 OS=Arabidopsis thaliana OX=3702 GN=NUG2 PE=1 SV=1	[more]
Q99LH1	6.9e-26	36.71	Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2	[more]
Q13823	7.7e-25	35.44	Nucleolar GTP-binding protein 2 OS=Homo sapiens OX=9606 GN=GNL2 PE=1 SV=1	[more]

BLAST of Cmc05g0128561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BS64	7.3e-71	68.97	Nuclear/nucleolar GTPase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0KTZ3	1.6e-70	68.53	Nuclear/nucleolar GTPase 2 OS=Cucumis sativus OX=3659 GN=Csa_5G631500 PE=3 SV=1	[more]
A0A6J1K2N0	4.9e-67	65.52	Nuclear/nucleolar GTPase 2 OS=Cucurbita maxima OX=3661 GN=LOC111489529 PE=3 SV=1	[more]
A0A6J1FGU6	3.2e-66	64.66	Nuclear/nucleolar GTPase 2 OS=Cucurbita moschata OX=3662 GN=LOC111445557 PE=3 SV...	[more]
A0A6J1C0B4	6.7e-64	63.36	Nuclear/nucleolar GTPase 2 OS=Momordica charantia OX=3673 GN=LOC111006286 PE=3 S...	[more]

BLAST of Cmc05g0128561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52980.1	1.5e-52	52.84	GTP-binding family protein	[more]
AT3G07050.1	5.7e-07	40.28	GTP-binding family protein	[more]
AT1G08410.1	1.5e-04	46.67	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G27200.1	1.5e-04	46.67	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012971	Nucleolar GTP-binding protein 2, N-terminal domain	PFAM	PF08153	NGP1NT	coord: 14..97 e-value: 2.0E-21 score: 76.5
None	No IPR available	PANTHER	PTHR11089	GTP-BINDING PROTEIN-RELATED	coord: 4..101 coord: 158..228
IPR024929	Nucleolar GTP-binding protein 2	PANTHER	PTHR11089:SF9	NUCLEOLAR GTP-BINDING PROTEIN 2	coord: 4..101
IPR024929	Nucleolar GTP-binding protein 2	PANTHER	PTHR11089:SF9	NUCLEOLAR GTP-BINDING PROTEIN 2	coord: 158..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0128561.1	Cmc05g0128561.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0000166	nucleotide binding