Cmc05g0127881 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0127881
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-H2 finger protein ATL16
Location	CMiso1.1chr05: 5289631 .. 5290551 (-)
RNA-Seq Expression	Cmc05g0127881
Synteny	Cmc05g0127881

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAACCCCTCATCTCTCCCTCCACCTCTCCCCTTCATTCTTCCAACCCCGTTTCAAGTTTTCCAATCATCGCCGTCGCCGTCATCGGAATCTGCGCTACCGCGTTTTTACTTGTCAGCTATTACATCTTCGTTATCAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGCCGCTTTTCTCTCTCCCGCCGCCGTGAAGACACGTTAATACTCCGGCAGCAAGCGGAGCCACGTGGGTTAGACCCATCAATCATCCAATCAATCCCACTGATTAATTACAAAAAACCCATTGGCGAAACTACCACAGGCGGCGAATGCGCCGTATGCCTGACGGAGTTTCAAACAGAGGAGCAATTGAGAAAAATTCCGATTTGTAGTCATCTCTTTCATATCGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCTCAATCTCCAATCAAAATTGGCTGATTCCGACCGATCAAGCTCCTTCCCGTCGGGATTTGGCTCTCAATACCGGCATCCCCATTTCCGCCGGCGATGAGAATTTCGTTGTTATTGAACTAGGTGGGAATCTAGATCGCCGCCAACCACCGGGGTTGGTGTCCGGCGAGGTGGCAAAATCGGAGAGGAAGTTTAAGAAGGTTACGAGTATGGGGGATGAGTGTATTAACATGAGGGAGAAGGATGAAGAGTTTATAGTGCAGCCGATTAGAAGGTCGTTTTCGATGGATTCGTCGGGTGACCGGCAGCTGTATATGGCTGTGCAAGCGGCGGTGCGGGAGAAGAGTGGTGGTGAGAATGGGGTTGAGGTTGAGGGTTGTAGTAGCAGAGTAAAACGATCTTTCTTTTCATTTGGGAGTGGAAGAGGATCAAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAG

mRNA sequence

ATGGCCCAACCCCTCATCTCTCCCTCCACCTCTCCCCTTCATTCTTCCAACCCCGTTTCAAGTTTTCCAATCATCGCCGTCGCCGTCATCGGAATCTGCGCTACCGCGTTTTTACTTGTCAGCTATTACATCTTCGTTATCAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGCCGCTTTTCTCTCTCCCGCCGCCGTGAAGACACGTTAATACTCCGGCAGCAAGCGGAGCCACGTGGGTTAGACCCATCAATCATCCAATCAATCCCACTGATTAATTACAAAAAACCCATTGGCGAAACTACCACAGGCGGCGAATGCGCCGTATGCCTGACGGAGTTTCAAACAGAGGAGCAATTGAGAAAAATTCCGATTTGTAGTCATCTCTTTCATATCGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCTCAATCTCCAATCAAAATTGGCTGATTCCGACCGATCAAGCTCCTTCCCGTCGGGATTTGGCTCTCAATACCGGCATCCCCATTTCCGCCGGCGATGAGAATTTCGTTGTTATTGAACTAGGTGGGAATCTAGATCGCCGCCAACCACCGGGGTTGGTGTCCGGCGAGGTGGCAAAATCGGAGAGGAAGTTTAAGAAGGTTACGAGTATGGGGGATGAGTGTATTAACATGAGGGAGAAGGATGAAGAGTTTATAGTGCAGCCGATTAGAAGGTCGTTTTCGATGGATTCGTCGGGTGACCGGCAGCTGTATATGGCTGTGCAAGCGGCGGTGCGGGAGAAGAGTGGTGGTGAGAATGGGGTTGAGGTTGAGGGTTGTAGTAGCAGAGTAAAACGATCTTTCTTTTCATTTGGGAGTGGAAGAGGATCAAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAG

Coding sequence (CDS)

ATGGCCCAACCCCTCATCTCTCCCTCCACCTCTCCCCTTCATTCTTCCAACCCCGTTTCAAGTTTTCCAATCATCGCCGTCGCCGTCATCGGAATCTGCGCTACCGCGTTTTTACTTGTCAGCTATTACATCTTCGTTATCAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGCCGCTTTTCTCTCTCCCGCCGCCGTGAAGACACGTTAATACTCCGGCAGCAAGCGGAGCCACGTGGGTTAGACCCATCAATCATCCAATCAATCCCACTGATTAATTACAAAAAACCCATTGGCGAAACTACCACAGGCGGCGAATGCGCCGTATGCCTGACGGAGTTTCAAACAGAGGAGCAATTGAGAAAAATTCCGATTTGTAGTCATCTCTTTCATATCGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCTCAATCTCCAATCAAAATTGGCTGATTCCGACCGATCAAGCTCCTTCCCGTCGGGATTTGGCTCTCAATACCGGCATCCCCATTTCCGCCGGCGATGAGAATTTCGTTGTTATTGAACTAGGTGGGAATCTAGATCGCCGCCAACCACCGGGGTTGGTGTCCGGCGAGGTGGCAAAATCGGAGAGGAAGTTTAAGAAGGTTACGAGTATGGGGGATGAGTGTATTAACATGAGGGAGAAGGATGAAGAGTTTATAGTGCAGCCGATTAGAAGGTCGTTTTCGATGGATTCGTCGGGTGACCGGCAGCTGTATATGGCTGTGCAAGCGGCGGTGCGGGAGAAGAGTGGTGGTGAGAATGGGGTTGAGGTTGAGGGTTGTAGTAGCAGAGTAAAACGATCTTTCTTTTCATTTGGGAGTGGAAGAGGATCAAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAG

Protein sequence

MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQPIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVLPIQFQP

Homology

[Close]

BLAST of Cmc05g0127881 vs. NCBI nr
Match: XP_008460634.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK08225.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 609.4 bits (1570), Expect = 1.7e-170
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240
           SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Cmc05g0127881 vs. NCBI nr
Match: XP_004142260.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 580.9 bits (1496), Expect = 6.6e-162
Identity = 295/307 (96.09%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQPLISPST+PLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGE-TTTGGECAVCLTEFQTE 120
           RFSLSRRRE TLILRQQAEPRGLDPS IQSIPLINYKKPI E TTTGGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPT+QAPS RDLALNT IP
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240
           ISAGDENFVVIELGGNLDR +PP LVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVREKSGGE+GVEVEGCSSRVKRSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 307
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of Cmc05g0127881 vs. NCBI nr
Match: XP_038875603.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 546.2 bits (1406), Expect = 1.8e-151
Identity = 276/306 (90.20%), Postives = 286/306 (93.46%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLV+YY+FVIKCCLNWQRIEILR
Sbjct: 1   MAQTLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVTYYVFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLI+YKKPI ETT+GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLISYKKPINETTSGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS QNWLIPTDQAPS +DL LNTG  I
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPQDLGLNTGSHI 180

Query: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240
           S  DENFVVIELG NLDRR+ P L S E A+S RKFKKVTSMGDECI+MREKDEEFIVQP
Sbjct: 181 SVADENFVVIELGRNLDRRRHPALGSSEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVREK  GENGVEVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKGDGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Cmc05g0127881 vs. NCBI nr
Match: KAE8651818.1 (hypothetical protein Csa_006040 [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 9.0e-135
Identity = 254/282 (90.07%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQPLISPST+PLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGE-TTTGGECAVCLTEFQTE 120
           RFSLSRRRE TLILRQQAEPRGLDPS IQSIPLINYKKPI E TTTGGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPT+QAPS RDLALNT IP
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240
           ISAGDENFVVIELGGNLDR +PP LVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSR 282
           PIRRSFSMDSSGDRQLYMA+ + VR      N ++ +G  SR
Sbjct: 241 PIRRSFSMDSSGDRQLYMAL-STVR-----SNNLQRQGSISR 276

[Close]

BLAST of Cmc05g0127881 vs. NCBI nr
Match: XP_023006323.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 488.8 bits (1257), Expect = 3.4e-134
Identity = 250/308 (81.17%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M +PLISPS +PLHSS  VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ A+PRGLDPS IQSIPLINYKKPI ET +GGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSIS QNWLIP DQAPS RDLALN+G  +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 SA--GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIV 240
            A   DENFVVIELG N DRR+PP             F KVTSMGDECI+MREKD+EF+V
Sbjct: 181 DATTADENFVVIELGRNPDRRRPP------------PFGKVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVR+  GGE+ VE EGCS+RV+RSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of Cmc05g0127881 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.2e-69
Identity = 165/353 (46.74%), Postives = 209/353 (59.21%), Query Frame = 0


Query: 15  SSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRR----ED 74
           +S+  +SFPI+AVAVIGI ATAFLLVSYY+FVIKCCLNW RI+IL RFSLSRRR    + 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  TLILRQQAEPRGLDPSIIQSIPLINYKKPIG-------------ETTTGGECAVCLTEFQ 134
            ++   +   RGLD S+I++IP+  +KK                E     EC+VCL+EFQ
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146

Query: 135 TEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTD-QAPSRRDLALNT 194
            EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRT +S      P    APS        
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSP----E 206

Query: 195 GIPISAGDENFVVIELGGNL--DR------------------------------RQPPGL 254
            + +  G+  +VVIELG ++  DR                                P  L
Sbjct: 207 NLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKL 266

Query: 255 VSGEVAKSERKFKKVTSMGDECINMRE-KDEEF-IVQPIRRSFSMDSSGDRQLYMAVQAA 307
             G + +  RK  K+TSMGDECI++R  KDE+F  +QPIRRS SMDSS DRQLY+AVQ A
Sbjct: 267 DRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEA 326

[Close]

BLAST of Cmc05g0127881 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.4e-66
Identity = 161/356 (45.22%), Postives = 210/356 (58.99%), Query Frame = 0


Query: 10  TSPL--HSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRR 69
           TSP+   +S+  ++FPI+A+AVIGI ATAFLLVSYYIFVIKCCLNW +I+I RR   S  
Sbjct: 27  TSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD 86

Query: 70  REDTLILRQQAEPRGLDPSIIQSIPLINYKK------PIGETTTGGECAVCLTEFQTEEQ 129
           +   +I       RGLD S I++IP+  +KK         ++    EC+VCL EFQ +E+
Sbjct: 87  QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146

Query: 130 LRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLI---------PTDQAPSRRDL 189
           LR IP C H+FHIDCIDIWLQ N+NCPLCRTS+S +             P + +P  R+ 
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNR 206

Query: 190 ALNTGIPISAGDENFVVIELGG----------NLD-RRQPPGLVSGEVA----------- 249
            L  G+ +  GD++FVVIELG           N+D   +   + S EV+           
Sbjct: 207 NLEPGL-VLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPL 266

Query: 250 ----------KSERKFKKVTSMGDECINMREKDEEF-IVQPIRRSFSMDSSGDRQLYMAV 307
                     K ERKF KVTSMGDECI+ R KD  F  +QPIRRS SMDSS DRQLY+AV
Sbjct: 267 PIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAV 326

[Close]

BLAST of Cmc05g0127881 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 15  SSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREDTLIL 74
           SS+  SSF  + +A+IGI  +A +LVSYY  + K C    +       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQQAEPR--GLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEEQLRKIPICSHLF 134
            Q+      GL+ S+I+SI +  YK   G    G +C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGDG-FVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNSNCPLCRTSISNQN 159
           H+ CID WL+++SNCPLCR  ++  N
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of Cmc05g0127881 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 6.9e-21
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 15  SSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLN---------WQRIEILRRFSLS 74
           +SNP  S P++ +A+ GI ATAFLL +YY  V K C N           R +I+   +  
Sbjct: 53  ASNPNLS-PLV-IAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSP 112

Query: 75  RRREDTLILRQQAEPRGLDPSIIQSIPLINYKK-PIGETTTGGECAVCLTEFQTEEQLRK 134
            R +       ++   GLD ++I+ I     KK   G    G +C++CL EF  +E LR 
Sbjct: 113 ERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRL 172

Query: 135 IPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALN 176
           +P C+H FH+ CID WL+++SNCPLCR  I     ++PT Q P    + +N
Sbjct: 173 LPKCNHTFHVVCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMN 216

[Close]

BLAST of Cmc05g0127881 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 7.6e-20
Identity = 79/249 (31.73%), Postives = 118/249 (47.39%), Query Frame = 0


Query: 20  SSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQR------IEILRRFSLSRRREDTLI 79
           S F  + +A+IGI A+AF+LVSYY  + K C   +          + R S     + T  
Sbjct: 54  SDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNN 113

Query: 80  LRQQAEPR-----------GLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEEQL 139
                              GLD S+I+SI +  Y+K  G      +C+VCL+EFQ  E L
Sbjct: 114 NNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDG-FVESSDCSVCLSEFQENESL 173

Query: 140 RKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPISA 199
           R +P C+H FH+ CID WL+++SNCPLCR  I   + +   D    +     N+   IS 
Sbjct: 174 RLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNS---IST 233

Query: 200 GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQPIR 252
           GD++ VV+    NLD       +    +++E   +  T    E  + R+ +E       R
Sbjct: 234 GDDSVVVV----NLD-------LENSRSRNETVNEGSTPKPPEMQDSRDGEE-------R 280

[Close]

BLAST of Cmc05g0127881 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 8.4e-171
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240
           SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Cmc05g0127881 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 8.4e-171
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240
           SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Cmc05g0127881 vs. ExPASy TrEMBL
Match: A0A0A0LNP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.2e-162
Identity = 295/307 (96.09%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQPLISPST+PLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGE-TTTGGECAVCLTEFQTE 120
           RFSLSRRRE TLILRQQAEPRGLDPS IQSIPLINYKKPI E TTTGGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPT+QAPS RDLALNT IP
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240
           ISAGDENFVVIELGGNLDR +PP LVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVREKSGGE+GVEVEGCSSRVKRSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 307
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of Cmc05g0127881 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.7e-134
Identity = 250/308 (81.17%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M +PLISPS +PLHSS  VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ A+PRGLDPS IQSIPLINYKKPI ET +GGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSIS QNWLIP DQAPS RDLALN+G  +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 SA--GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIV 240
            A   DENFVVIELG N DRR+PP             F KVTSMGDECI+MREKD+EF+V
Sbjct: 181 DATTADENFVVIELGRNPDRRRPP------------PFGKVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVR+  GGE+ VE EGCS+RV+RSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of Cmc05g0127881 vs. ExPASy TrEMBL
Match: A0A6J1H640 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 4.1e-133
Identity = 248/308 (80.52%), Postives = 265/308 (86.04%), Query Frame = 0


Query: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M +PLISPS +P HSS  VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ  EPRGLDPS IQSIPLINYKKPI ET++GGECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSIS QNWLIP DQAPS RDL LN+G  +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 SA--GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIV 240
           +A   DENFVVIELG N DRR+PP             F KVTSMGDECI+MREKD+EF+V
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPP------------PFGKVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAV++  GGE+ VE EGCS+RV+RSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of Cmc05g0127881 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-70
Identity = 165/353 (46.74%), Postives = 209/353 (59.21%), Query Frame = 0


Query: 15  SSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRR----ED 74
           +S+  +SFPI+AVAVIGI ATAFLLVSYY+FVIKCCLNW RI+IL RFSLSRRR    + 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  TLILRQQAEPRGLDPSIIQSIPLINYKKPIG-------------ETTTGGECAVCLTEFQ 134
            ++   +   RGLD S+I++IP+  +KK                E     EC+VCL+EFQ
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQ 146

Query: 135 TEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTD-QAPSRRDLALNT 194
            EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRT +S      P    APS        
Sbjct: 147 DEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSP----E 206

Query: 195 GIPISAGDENFVVIELGGNL--DR------------------------------RQPPGL 254
            + +  G+  +VVIELG ++  DR                                P  L
Sbjct: 207 NLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKL 266

Query: 255 VSGEVAKSERKFKKVTSMGDECINMRE-KDEEF-IVQPIRRSFSMDSSGDRQLYMAVQAA 307
             G + +  RK  K+TSMGDECI++R  KDE+F  +QPIRRS SMDSS DRQLY+AVQ A
Sbjct: 267 DRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEA 326

[Close]

BLAST of Cmc05g0127881 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-67
Identity = 161/356 (45.22%), Postives = 210/356 (58.99%), Query Frame = 0


Query: 10  TSPL--HSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRR 69
           TSP+   +S+  ++FPI+A+AVIGI ATAFLLVSYYIFVIKCCLNW +I+I RR   S  
Sbjct: 27  TSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD 86

Query: 70  REDTLILRQQAEPRGLDPSIIQSIPLINYKK------PIGETTTGGECAVCLTEFQTEEQ 129
           +   +I       RGLD S I++IP+  +KK         ++    EC+VCL EFQ +E+
Sbjct: 87  QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146

Query: 130 LRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLI---------PTDQAPSRRDL 189
           LR IP C H+FHIDCIDIWLQ N+NCPLCRTS+S +             P + +P  R+ 
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNR 206

Query: 190 ALNTGIPISAGDENFVVIELGG----------NLD-RRQPPGLVSGEVA----------- 249
            L  G+ +  GD++FVVIELG           N+D   +   + S EV+           
Sbjct: 207 NLEPGL-VLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSPL 266

Query: 250 ----------KSERKFKKVTSMGDECINMREKDEEF-IVQPIRRSFSMDSSGDRQLYMAV 307
                     K ERKF KVTSMGDECI+ R KD  F  +QPIRRS SMDSS DRQLY+AV
Sbjct: 267 PIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAV 326

[Close]

BLAST of Cmc05g0127881 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 9.9e-23
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 15  SSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREDTLIL 74
           SS+  SSF  + +A+IGI  +A +LVSYY  + K C    +       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQQAEPR--GLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEEQLRKIPICSHLF 134
            Q+      GL+ S+I+SI +  YK   G    G +C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGDG-FVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNSNCPLCRTSISNQN 159
           H+ CID WL+++SNCPLCR  ++  N
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of Cmc05g0127881 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.9e-22
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 15  SSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLN---------WQRIEILRRFSLS 74
           +SNP  S P++ +A+ GI ATAFLL +YY  V K C N           R +I+   +  
Sbjct: 53  ASNPNLS-PLV-IAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSP 112

Query: 75  RRREDTLILRQQAEPRGLDPSIIQSIPLINYKK-PIGETTTGGECAVCLTEFQTEEQLRK 134
            R +       ++   GLD ++I+ I     KK   G    G +C++CL EF  +E LR 
Sbjct: 113 ERGDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRL 172

Query: 135 IPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALN 176
           +P C+H FH+ CID WL+++SNCPLCR  I     ++PT Q P    + +N
Sbjct: 173 LPKCNHTFHVVCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMN 216

[Close]

BLAST of Cmc05g0127881 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 5.4e-21
Identity = 79/249 (31.73%), Postives = 118/249 (47.39%), Query Frame = 0


Query: 20  SSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQR------IEILRRFSLSRRREDTLI 79
           S F  + +A+IGI A+AF+LVSYY  + K C   +          + R S     + T  
Sbjct: 54  SDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNN 113

Query: 80  LRQQAEPR-----------GLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEEQL 139
                              GLD S+I+SI +  Y+K  G      +C+VCL+EFQ  E L
Sbjct: 114 NNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDG-FVESSDCSVCLSEFQENESL 173

Query: 140 RKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPISA 199
           R +P C+H FH+ CID WL+++SNCPLCR  I   + +   D    +     N+   IS 
Sbjct: 174 RLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNS---IST 233

Query: 200 GDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQPIR 252
           GD++ VV+    NLD       +    +++E   +  T    E  + R+ +E       R
Sbjct: 234 GDDSVVVV----NLD-------LENSRSRNETVNEGSTPKPPEMQDSRDGEE-------R 280

The following BLAST results are available for this feature:

BLAST of Cmc05g0127881 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460634.1	1.7e-170	100.00	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 fin...	[more]
XP_004142260.1	6.6e-162	96.09	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
XP_038875603.1	1.8e-151	90.20	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
KAE8651818.1	9.0e-135	90.07	hypothetical protein Csa_006040 [Cucumis sativus]	[more]
XP_023006323.1	3.4e-134	81.17	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]

BLAST of Cmc05g0127881 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	5.2e-69	46.74	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	5.4e-66	45.22	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.4e-21	39.04	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
P0C041	6.9e-21	36.84	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q9SRQ8	7.6e-20	31.73	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of Cmc05g0127881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEZ8	8.4e-171	100.00	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	8.4e-171	100.00	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A0A0LNP5	3.2e-162	96.09	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 P...	[more]
A0A6J1L4L0	1.7e-134	81.17	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]
A0A6J1H640	4.1e-133	80.52	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 ...	[more]

BLAST of Cmc05g0127881 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	3.7e-70	46.74	RING/U-box superfamily protein	[more]
AT1G04360.1	3.8e-67	45.22	RING/U-box superfamily protein	[more]
AT5G17600.1	9.9e-23	39.04	RING/U-box superfamily protein	[more]
AT4G17905.1	4.9e-22	36.84	RING/U-box superfamily protein	[more]
AT3G03550.1	5.4e-21	31.73	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 8.8E-6 score: 35.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..151 e-value: 3.1E-12 score: 46.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 12.25323
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 70..157 e-value: 6.2E-22 score: 79.1
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 10..305
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 10..305
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 108..151 e-value: 8.26066E-17 score: 70.7937
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 108..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0127881.1	Cmc05g0127881.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016020	membrane
molecular_function	GO:0016740	transferase activity