Cmc05g0127261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0127261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr05: 4551836 .. 4553014 (+)
RNA-Seq Expression	Cmc05g0127261
Synteny	Cmc05g0127261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCATCAAGGGGTTTCCCAAATCACACGGGTGGGAGGTGATACTGGTAGTAGTAGACCGGCCGAGCAAATACGCTCATTTTCTCACATTGAAACACCCATATACTGCCAAGACAGTGGCCGAAGTGTTTGTCAAGGAAATAGTAAAGCTACATGGGTACCCCAAGTCGATAGTTTCAGACAGGGACAAAATCTTTCTCAGCCACTTTTGGACCGAAATGTTTAGATTAGCTGGCACTAAGTTGAACCGGAGTTCCTCCTATCATCCTCAAACGGATGGGCAGACCGAGGTGGTTAACAAAAGTGTAGAAGCCTATTTGAGGTGTTTTTGCGGGGAGAAACCGAGGGAGTGGAGCCAATGGTTACACTGGGCCGAATATTGGTACAACACCACCTACCATGGGTCAATTGGAATCAGTCCATTTCAAGCGGTATACGGAAGACTCCCACCTCCTTTGATCCAATACGGGGACATGGAAACACCCAACTCCACGCTTGATCAGCAACTAAGGGACAGAGAAACTGTATTGGGAACATTGAAGGAACAATTGCAGGTGGCTCAAGAGAGAATGAAAAGATTTGCAGATACGAAAAGAAGAGATGTGGAGTTTCAAACAGGGGATCATGTGTTCCTCAAACTAAGGCCCTACGGACAAACATCCCTTCAGAAGAAACGCAATGAAAAACTATCACCAAAATACTTCGGGCCCTACGGAATTATAGAAAGAATTGGGACAGTGGCATACAAACTGGAATTACCCAGTACTGCAGCCATTCATCCGGTGTTTCATGTATCTCAGCTCAAGAAGGCAATAAGGAACGTCAAAGAAACCCAGCCCCTTGATCCACATGTAAATGAATGTCATGAGTGGATTACACAACCAAAGGAAGTCTATGCGTATCGAAAGAATCAGGCCACCAAGAAATGGGAGGTATTGGTAAGCTGGAAAGGACTACCCCCGCACAAAGCGACCTGGGAAAATTGTGCAGATCTGAAAGTACAATTCCCTAAGTTCCACCTTGAGGACAAGGCGGATTTAGAGGAGGAAAGTGATGCTAGACCTCCAATTTTATTCACCTATAACCGAAGGAAGAAGGACAGTAATAAGGGGACACGTGGAAGCAGTGAGGAAAGCAAGGAGACTGGGGACCAGTCAGGGGGGGCCACGAGTTAG

mRNA sequence

ATGGATTTCATCAAGGGGTTTCCCAAATCACACGGGTGGGAGGTGATACTGGTAGTAGTAGACCGGCCGAGCAAATACGCTCATTTTCTCACATTGAAACACCCATATACTGCCAAGACAGTGGCCGAAGTGTTTGTCAAGGAAATAGTAAAGCTACATGGGTACCCCAAGTCGATAGTTTCAGACAGGGACAAAATCTTTCTCAGCCACTTTTGGACCGAAATGTTTAGATTAGCTGGCACTAAGTTGAACCGGAGTTCCTCCTATCATCCTCAAACGGATGGGCAGACCGAGGTGGTTAACAAAAGTGTAGAAGCCTATTTGAGGTGTTTTTGCGGGGAGAAACCGAGGGAGTGGAGCCAATGGTTACACTGGGCCGAATATTGGTACAACACCACCTACCATGGGTCAATTGGAATCAGTCCATTTCAAGCGGTATACGGAAGACTCCCACCTCCTTTGATCCAATACGGGGACATGGAAACACCCAACTCCACGCTTGATCAGCAACTAAGGGACAGAGAAACTGTATTGGGAACATTGAAGGAACAATTGCAGGTGGCTCAAGAGAGAATGAAAAGATTTGCAGATACGAAAAGAAGAGATGTGGAGTTTCAAACAGGGGATCATGTGTTCCTCAAACTAAGGCCCTACGGACAAACATCCCTTCAGAAGAAACGCAATGAAAAACTATCACCAAAATACTTCGGGCCCTACGGAATTATAGAAAGAATTGGGACAGTGGCATACAAACTGGAATTACCCAGTACTGCAGCCATTCATCCGGTGTTTCATGTATCTCAGCTCAAGAAGGCAATAAGGAACGTCAAAGAAACCCAGCCCCTTGATCCACATGTAAATGAATGTCATGAGTGGATTACACAACCAAAGGAAGTCTATGCGTATCGAAAGAATCAGGCCACCAAGAAATGGGAGGTATTGGTAAGCTGGAAAGGACTACCCCCGCACAAAGCGACCTGGGAAAATTGTGCAGATCTGAAAGTACAATTCCCTAAGTTCCACCTTGAGGACAAGGCGGATTTAGAGGAGGAAAGTGATGCTAGACCTCCAATTTTATTCACCTATAACCGAAGGAAGAAGGACAGTAATAAGGGGACACGTGGAAGCAGTGAGGAAAGCAAGGAGACTGGGGACCAGTCAGGGGGGGCCACGAGTTAG

Coding sequence (CDS)

ATGGATTTCATCAAGGGGTTTCCCAAATCACACGGGTGGGAGGTGATACTGGTAGTAGTAGACCGGCCGAGCAAATACGCTCATTTTCTCACATTGAAACACCCATATACTGCCAAGACAGTGGCCGAAGTGTTTGTCAAGGAAATAGTAAAGCTACATGGGTACCCCAAGTCGATAGTTTCAGACAGGGACAAAATCTTTCTCAGCCACTTTTGGACCGAAATGTTTAGATTAGCTGGCACTAAGTTGAACCGGAGTTCCTCCTATCATCCTCAAACGGATGGGCAGACCGAGGTGGTTAACAAAAGTGTAGAAGCCTATTTGAGGTGTTTTTGCGGGGAGAAACCGAGGGAGTGGAGCCAATGGTTACACTGGGCCGAATATTGGTACAACACCACCTACCATGGGTCAATTGGAATCAGTCCATTTCAAGCGGTATACGGAAGACTCCCACCTCCTTTGATCCAATACGGGGACATGGAAACACCCAACTCCACGCTTGATCAGCAACTAAGGGACAGAGAAACTGTATTGGGAACATTGAAGGAACAATTGCAGGTGGCTCAAGAGAGAATGAAAAGATTTGCAGATACGAAAAGAAGAGATGTGGAGTTTCAAACAGGGGATCATGTGTTCCTCAAACTAAGGCCCTACGGACAAACATCCCTTCAGAAGAAACGCAATGAAAAACTATCACCAAAATACTTCGGGCCCTACGGAATTATAGAAAGAATTGGGACAGTGGCATACAAACTGGAATTACCCAGTACTGCAGCCATTCATCCGGTGTTTCATGTATCTCAGCTCAAGAAGGCAATAAGGAACGTCAAAGAAACCCAGCCCCTTGATCCACATGTAAATGAATGTCATGAGTGGATTACACAACCAAAGGAAGTCTATGCGTATCGAAAGAATCAGGCCACCAAGAAATGGGAGGTATTGGTAAGCTGGAAAGGACTACCCCCGCACAAAGCGACCTGGGAAAATTGTGCAGATCTGAAAGTACAATTCCCTAAGTTCCACCTTGAGGACAAGGCGGATTTAGAGGAGGAAAGTGATGCTAGACCTCCAATTTTATTCACCTATAACCGAAGGAAGAAGGACAGTAATAAGGGGACACGTGGAAGCAGTGAGGAAAGCAAGGAGACTGGGGACCAGTCAGGGGGGGCCACGAGTTAG

Protein sequence

MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS

Homology

[Close]

BLAST of Cmc05g0127261 vs. NCBI nr
Match: KAA0057462.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK30159.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 726.1 bits (1873), Expect = 1.6e-205
Identity = 351/353 (99.43%), Postives = 352/353 (99.72%), Query Frame = 0


Query: 40   TVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEV 99
            TVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEV
Sbjct: 887  TVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEV 946

Query: 100  VNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGD 159
            VNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGD
Sbjct: 947  VNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGD 1006

Query: 160  METPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYG 219
            METPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYG
Sbjct: 1007 METPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYG 1066

Query: 220  QTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKET 279
            QTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAI NVKET
Sbjct: 1067 QTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIGNVKET 1126

Query: 280  QPLDPHVNECHEWITQPKEVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPK 339
            QPLDPHVNECHEWITQP+EVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPK
Sbjct: 1127 QPLDPHVNECHEWITQPEEVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPK 1186

Query: 340  FHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS 393
            FHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS
Sbjct: 1187 FHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS 1239

[Close]

BLAST of Cmc05g0127261 vs. NCBI nr
Match: KAA0051400.1 (putative retroelement pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 724.5 bits (1869), Expect = 4.7e-205
Identity = 346/390 (88.72%), Postives = 368/390 (94.36%), Query Frame = 0


Query: 1   MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
           MDFI+G PKSHGWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKEIVKLHG+PKSIV
Sbjct: 361 MDFIEGLPKSHGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGFPKSIV 420

Query: 61  SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
           SDRDKIFLSHFW+EMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS
Sbjct: 421 SDRDKIFLSHFWSEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 480

Query: 121 QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
           QWLHW EYWYNTTYHGSIGISPFQ VYGRLPPPLIQYGDMETPNSTLDQQLRD++ +LG 
Sbjct: 481 QWLHWVEYWYNTTYHGSIGISPFQPVYGRLPPPLIQYGDMETPNSTLDQQLRDKDVILGA 540

Query: 181 LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
           LKE L+VAQERMK+FAD KRRD+EFQTGD+VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 541 LKEHLRVAQERMKKFADLKRRDMEFQTGDYVFLKLRPYRQTSLRKKRNEKLSPKYFGPYR 600

Query: 241 IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
           I+ERIGTVAYKL+LPS AAIHPVFHVSQLKKAI N+KETQPLDP+VNECHEWITQP+E+Y
Sbjct: 601 ILERIGTVAYKLKLPSAAAIHPVFHVSQLKKAIGNIKETQPLDPYVNECHEWITQPEEIY 660

Query: 301 AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
           AYRKNQATK+WE LVSWKGLPPH+ATWEN  DLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 661 AYRKNQATKEWEALVSWKGLPPHEATWENYVDLKVQFPEFHLEDKVDLEEESDARPPILF 720

Query: 361 TYNRRKKDSNKGTRGSSEESKETG-DQSGG 390
           TYNRRKKD  KGTRG++EESKE G  Q GG
Sbjct: 721 TYNRRKKD--KGTRGNNEESKELGTSQEGG 748

[Close]

BLAST of Cmc05g0127261 vs. NCBI nr
Match: KAA0063300.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 720.7 bits (1859), Expect = 6.8e-204
Identity = 344/389 (88.43%), Postives = 364/389 (93.57%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFIKG PKSHGWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKE+V+LHG+PKSIV
Sbjct: 1040 MDFIKGLPKSHGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIV 1099

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            SDRDKIFLSHFW+EMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFC EKPREWS
Sbjct: 1100 SDRDKIFLSHFWSEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCREKPREWS 1159

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
            QWLHWAEYWYNTTYH SIGISPFQAVYGRLPPPLIQYG+M+TPNSTLDQQLRDR+ +LG 
Sbjct: 1160 QWLHWAEYWYNTTYHESIGISPFQAVYGRLPPPLIQYGEMKTPNSTLDQQLRDRDVILGA 1219

Query: 181  LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
            LKE L+VAQERMK+FAD KRRDVEFQTGD VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 1220 LKEHLRVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYR 1279

Query: 241  IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
            I+ERIGTVAYKLELPS AAIHPVFHVSQLKKAI N+KE QPLDP+VNECHEWITQP+E+Y
Sbjct: 1280 ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQPLDPYVNECHEWITQPEEIY 1339

Query: 301  AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
            AYRKNQATK+WE LV WKGLPPH+ATWEN ADLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 1340 AYRKNQATKEWEALVHWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILF 1399

Query: 361  TYNRRKKDSNKGTRGSSEESKETGDQSGG 390
            TYNRRKKD  KGTRG+ EESKE G   GG
Sbjct: 1400 TYNRRKKD--KGTRGNGEESKELGPAKGG 1426

[Close]

BLAST of Cmc05g0127261 vs. NCBI nr
Match: KAA0041253.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 719.2 bits (1855), Expect = 2.0e-203
Identity = 344/389 (88.43%), Postives = 364/389 (93.57%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI+G PKS+GWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKE+V+LHG+PKSIV
Sbjct: 632  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIV 691

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
             DRDKIFLSHFW+EMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFC EKPREWS
Sbjct: 692  LDRDKIFLSHFWSEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCREKPREWS 751

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
            QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYG+METPNSTLDQQLRDR+ VLG 
Sbjct: 752  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGA 811

Query: 181  LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
            LKE LQVAQERMK+FAD KRRDVEFQTGD VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 812  LKEHLQVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYR 871

Query: 241  IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
            I+ERIGTVAYKLELPS AAIHPVFHVSQLKKAI ++KE QPLDP+VNECHEWITQP+E+Y
Sbjct: 872  ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGDIKEVQPLDPYVNECHEWITQPEEIY 931

Query: 301  AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
            AYRKNQATK+WE LV WKGLPPH+ATWEN ADLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 932  AYRKNQATKEWEALVHWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILF 991

Query: 361  TYNRRKKDSNKGTRGSSEESKETGDQSGG 390
            TYNRRKKD  KGTRG+ EESKE G   GG
Sbjct: 992  TYNRRKKD--KGTRGNGEESKELGPAKGG 1018

[Close]

BLAST of Cmc05g0127261 vs. NCBI nr
Match: KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 715.7 bits (1846), Expect = 2.2e-202
Identity = 340/386 (88.08%), Postives = 363/386 (94.04%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI+G PKS+GWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKE+V+LHG+PKSIV
Sbjct: 1178 MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIV 1237

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            SDRDKIF+SHFW+EMF+LAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPR+WS
Sbjct: 1238 SDRDKIFISHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPRDWS 1297

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
            QWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYG+METPNSTLDQQLRDR+ VLG 
Sbjct: 1298 QWLHWAEYWYNTTYHGSIGITPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGA 1357

Query: 181  LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
            LKE L+VAQERMK+FAD KRRDVEFQTGD VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 1358 LKEHLRVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYK 1417

Query: 241  IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
            I+ERIGTVAYKLELPS AAIHPVFHVSQLKKAI N++ETQ LDP VNECHEWITQP+E+Y
Sbjct: 1418 ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIQETQSLDPFVNECHEWITQPEEIY 1477

Query: 301  AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
            AYRKNQATK+WE LV WKGLPPH+ATWEN ADLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 1478 AYRKNQATKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILF 1537

Query: 361  TYNRRKKDSNKGTRGSSEESKETGDQ 387
            TYNRRKKD  KGTRG  EESKE G Q
Sbjct: 1538 TYNRRKKD--KGTRGDGEESKEGGPQ 1561

[Close]

BLAST of Cmc05g0127261 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37
Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI   P+S G+  + VVVDR SK A  +      TA+  A +F + ++   G PK I+
Sbjct: 989  MDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEII 1048

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            +D D IF S  W +        +  S  Y PQTDGQTE  N++VE  LRC C   P  W 
Sbjct: 1049 ADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETP--NSTLDQQLRDRETVL 180
              +   +  YN   H +  ++PF+ V+ R  P L     +E P  +   D+  ++   V 
Sbjct: 1109 DHISLVQQSYNNAIHSATQMTPFEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVF 1168

Query: 181  GTLKEQLQVAQERMKRFADTKRRDV-EFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFG 240
             T+KE L     +MK++ D K +++ EFQ GD V +K     +T    K N KL+P + G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSN-KLAPSFAG 1228

Query: 241  PYGIIERIGTVAYKLELPSTA--AIHPVFHVSQLKKAIRN 276
            P+ ++++ G   Y+L+LP +        FHVS L+K   N
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHN 1260

[Close]

BLAST of Cmc05g0127261 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37
Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI   P+S G+  + VVVDR SK A  +      TA+  A +F + ++   G PK I+
Sbjct: 989  MDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEII 1048

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            +D D IF S  W +        +  S  Y PQTDGQTE  N++VE  LRC C   P  W 
Sbjct: 1049 ADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETP--NSTLDQQLRDRETVL 180
              +   +  YN   H +  ++PF+ V+ R  P L     +E P  +   D+  ++   V 
Sbjct: 1109 DHISLVQQSYNNAIHSATQMTPFEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVF 1168

Query: 181  GTLKEQLQVAQERMKRFADTKRRDV-EFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFG 240
             T+KE L     +MK++ D K +++ EFQ GD V +K     +T    K N KL+P + G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSN-KLAPSFAG 1228

Query: 241  PYGIIERIGTVAYKLELPSTA--AIHPVFHVSQLKKAIRN 276
            P+ ++++ G   Y+L+LP +        FHVS L+K   N
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHN 1260

[Close]

BLAST of Cmc05g0127261 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37
Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI   P+S G+  + VVVDR SK A  +      TA+  A +F + ++   G PK I+
Sbjct: 989  MDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEII 1048

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            +D D IF S  W +        +  S  Y PQTDGQTE  N++VE  LRC C   P  W 
Sbjct: 1049 ADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETP--NSTLDQQLRDRETVL 180
              +   +  YN   H +  ++PF+ V+ R  P L     +E P  +   D+  ++   V 
Sbjct: 1109 DHISLVQQSYNNAIHSATQMTPFEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVF 1168

Query: 181  GTLKEQLQVAQERMKRFADTKRRDV-EFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFG 240
             T+KE L     +MK++ D K +++ EFQ GD V +K     +T    K N KL+P + G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSN-KLAPSFAG 1228

Query: 241  PYGIIERIGTVAYKLELPSTA--AIHPVFHVSQLKKAIRN 276
            P+ ++++ G   Y+L+LP +        FHVS L+K   N
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHN 1260

[Close]

BLAST of Cmc05g0127261 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37
Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI   P+S G+  + VVVDR SK A  +      TA+  A +F + ++   G PK I+
Sbjct: 989  MDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEII 1048

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            +D D IF S  W +        +  S  Y PQTDGQTE  N++VE  LRC C   P  W 
Sbjct: 1049 ADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETP--NSTLDQQLRDRETVL 180
              +   +  YN   H +  ++PF+ V+ R  P L     +E P  +   D+  ++   V 
Sbjct: 1109 DHISLVQQSYNNAIHSATQMTPFEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVF 1168

Query: 181  GTLKEQLQVAQERMKRFADTKRRDV-EFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFG 240
             T+KE L     +MK++ D K +++ EFQ GD V +K     +T    K N KL+P + G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSN-KLAPSFAG 1228

Query: 241  PYGIIERIGTVAYKLELPSTA--AIHPVFHVSQLKKAIRN 276
            P+ ++++ G   Y+L+LP +        FHVS L+K   N
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHN 1260

[Close]

BLAST of Cmc05g0127261 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-37
Identity = 96/280 (34.29%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI   P+S G+  + VVVDR SK A  +      TA+  A +F + ++   G PK I+
Sbjct: 989  MDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEII 1048

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            +D D IF S  W +        +  S  Y PQTDGQTE  N++VE  LRC C   P  W 
Sbjct: 1049 ADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWV 1108

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETP--NSTLDQQLRDRETVL 180
              +   +  YN   H +  ++PF+ V+ R  P L     +E P  +   D+  ++   V 
Sbjct: 1109 DHISLVQQSYNNAIHSATQMTPFEIVH-RYSPAL---SPLELPSFSDKTDENSQETIQVF 1168

Query: 181  GTLKEQLQVAQERMKRFADTKRRDV-EFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFG 240
             T+KE L     +MK++ D K +++ EFQ GD V +K     +T    K N KL+P + G
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRT---KTGFLHKSN-KLAPSFAG 1228

Query: 241  PYGIIERIGTVAYKLELPSTA--AIHPVFHVSQLKKAIRN 276
            P+ ++++ G   Y+L+LP +        FHVS L+K   N
Sbjct: 1229 PFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHN 1260

[Close]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL
Match: A0A5A7UNM4 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001460 PE=4 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 7.9e-206
Identity = 351/353 (99.43%), Postives = 352/353 (99.72%), Query Frame = 0


Query: 40   TVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEV 99
            TVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEV
Sbjct: 887  TVAEVFVKEIVKLHGYPKSIVSDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEV 946

Query: 100  VNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGD 159
            VNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGD
Sbjct: 947  VNKSVEAYLRCFCGEKPREWSQWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGD 1006

Query: 160  METPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYG 219
            METPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYG
Sbjct: 1007 METPNSTLDQQLRDRETVLGTLKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYG 1066

Query: 220  QTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKET 279
            QTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAI NVKET
Sbjct: 1067 QTSLQKKRNEKLSPKYFGPYGIIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIGNVKET 1126

Query: 280  QPLDPHVNECHEWITQPKEVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPK 339
            QPLDPHVNECHEWITQP+EVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPK
Sbjct: 1127 QPLDPHVNECHEWITQPEEVYAYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPK 1186

Query: 340  FHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS 393
            FHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS
Sbjct: 1187 FHLEDKADLEEESDARPPILFTYNRRKKDSNKGTRGSSEESKETGDQSGGATS 1239

[Close]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL
Match: A0A5A7U8A5 (Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001420 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 346/390 (88.72%), Postives = 368/390 (94.36%), Query Frame = 0


Query: 1   MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
           MDFI+G PKSHGWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKEIVKLHG+PKSIV
Sbjct: 361 MDFIEGLPKSHGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGFPKSIV 420

Query: 61  SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
           SDRDKIFLSHFW+EMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS
Sbjct: 421 SDRDKIFLSHFWSEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 480

Query: 121 QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
           QWLHW EYWYNTTYHGSIGISPFQ VYGRLPPPLIQYGDMETPNSTLDQQLRD++ +LG 
Sbjct: 481 QWLHWVEYWYNTTYHGSIGISPFQPVYGRLPPPLIQYGDMETPNSTLDQQLRDKDVILGA 540

Query: 181 LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
           LKE L+VAQERMK+FAD KRRD+EFQTGD+VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 541 LKEHLRVAQERMKKFADLKRRDMEFQTGDYVFLKLRPYRQTSLRKKRNEKLSPKYFGPYR 600

Query: 241 IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
           I+ERIGTVAYKL+LPS AAIHPVFHVSQLKKAI N+KETQPLDP+VNECHEWITQP+E+Y
Sbjct: 601 ILERIGTVAYKLKLPSAAAIHPVFHVSQLKKAIGNIKETQPLDPYVNECHEWITQPEEIY 660

Query: 301 AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
           AYRKNQATK+WE LVSWKGLPPH+ATWEN  DLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 661 AYRKNQATKEWEALVSWKGLPPHEATWENYVDLKVQFPEFHLEDKVDLEEESDARPPILF 720

Query: 361 TYNRRKKDSNKGTRGSSEESKETG-DQSGG 390
           TYNRRKKD  KGTRG++EESKE G  Q GG
Sbjct: 721 TYNRRKKD--KGTRGNNEESKELGTSQEGG 748

[Close]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL
Match: A0A5A7V7S9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001230 PE=4 SV=1)

HSP 1 Score: 720.7 bits (1859), Expect = 3.3e-204
Identity = 344/389 (88.43%), Postives = 364/389 (93.57%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFIKG PKSHGWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKE+V+LHG+PKSIV
Sbjct: 1040 MDFIKGLPKSHGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIV 1099

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            SDRDKIFLSHFW+EMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFC EKPREWS
Sbjct: 1100 SDRDKIFLSHFWSEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCREKPREWS 1159

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
            QWLHWAEYWYNTTYH SIGISPFQAVYGRLPPPLIQYG+M+TPNSTLDQQLRDR+ +LG 
Sbjct: 1160 QWLHWAEYWYNTTYHESIGISPFQAVYGRLPPPLIQYGEMKTPNSTLDQQLRDRDVILGA 1219

Query: 181  LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
            LKE L+VAQERMK+FAD KRRDVEFQTGD VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 1220 LKEHLRVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYR 1279

Query: 241  IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
            I+ERIGTVAYKLELPS AAIHPVFHVSQLKKAI N+KE QPLDP+VNECHEWITQP+E+Y
Sbjct: 1280 ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIKEVQPLDPYVNECHEWITQPEEIY 1339

Query: 301  AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
            AYRKNQATK+WE LV WKGLPPH+ATWEN ADLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 1340 AYRKNQATKEWEALVHWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILF 1399

Query: 361  TYNRRKKDSNKGTRGSSEESKETGDQSGG 390
            TYNRRKKD  KGTRG+ EESKE G   GG
Sbjct: 1400 TYNRRKKD--KGTRGNGEESKELGPAKGG 1426

[Close]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL
Match: A0A5A7TDM4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002330 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 9.6e-204
Identity = 344/389 (88.43%), Postives = 364/389 (93.57%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI+G PKS+GWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKE+V+LHG+PKSIV
Sbjct: 632  MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIV 691

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
             DRDKIFLSHFW+EMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFC EKPREWS
Sbjct: 692  LDRDKIFLSHFWSEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCREKPREWS 751

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
            QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYG+METPNSTLDQQLRDR+ VLG 
Sbjct: 752  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGA 811

Query: 181  LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
            LKE LQVAQERMK+FAD KRRDVEFQTGD VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 812  LKEHLQVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYR 871

Query: 241  IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
            I+ERIGTVAYKLELPS AAIHPVFHVSQLKKAI ++KE QPLDP+VNECHEWITQP+E+Y
Sbjct: 872  ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGDIKEVQPLDPYVNECHEWITQPEEIY 931

Query: 301  AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
            AYRKNQATK+WE LV WKGLPPH+ATWEN ADLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 932  AYRKNQATKEWEALVHWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILF 991

Query: 361  TYNRRKKDSNKGTRGSSEESKETGDQSGG 390
            TYNRRKKD  KGTRG+ EESKE G   GG
Sbjct: 992  TYNRRKKD--KGTRGNGEESKELGPAKGG 1018

[Close]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL
Match: A0A5A7U6J3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001310 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.1e-202
Identity = 340/386 (88.08%), Postives = 363/386 (94.04%), Query Frame = 0


Query: 1    MDFIKGFPKSHGWEVILVVVDRPSKYAHFLTLKHPYTAKTVAEVFVKEIVKLHGYPKSIV 60
            MDFI+G PKS+GWEVILVVVDR SKYAHFLTLKHPYTAKTVAEVFVKE+V+LHG+PKSIV
Sbjct: 1178 MDFIEGLPKSYGWEVILVVVDRLSKYAHFLTLKHPYTAKTVAEVFVKEVVRLHGFPKSIV 1237

Query: 61   SDRDKIFLSHFWTEMFRLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPREWS 120
            SDRDKIF+SHFW+EMF+LAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPR+WS
Sbjct: 1238 SDRDKIFISHFWSEMFKLAGTKLNRSSSYHPQTDGQTEVVNKSVEAYLRCFCGEKPRDWS 1297

Query: 121  QWLHWAEYWYNTTYHGSIGISPFQAVYGRLPPPLIQYGDMETPNSTLDQQLRDRETVLGT 180
            QWLHWAEYWYNTTYHGSIGI+PFQAVYGRLPPPLIQYG+METPNSTLDQQLRDR+ VLG 
Sbjct: 1298 QWLHWAEYWYNTTYHGSIGITPFQAVYGRLPPPLIQYGEMETPNSTLDQQLRDRDVVLGA 1357

Query: 181  LKEQLQVAQERMKRFADTKRRDVEFQTGDHVFLKLRPYGQTSLQKKRNEKLSPKYFGPYG 240
            LKE L+VAQERMK+FAD KRRDVEFQTGD VFLKLRPY QTSL+KKRNEKLSPKYFGPY 
Sbjct: 1358 LKEHLRVAQERMKKFADLKRRDVEFQTGDFVFLKLRPYRQTSLRKKRNEKLSPKYFGPYK 1417

Query: 241  IIERIGTVAYKLELPSTAAIHPVFHVSQLKKAIRNVKETQPLDPHVNECHEWITQPKEVY 300
            I+ERIGTVAYKLELPS AAIHPVFHVSQLKKAI N++ETQ LDP VNECHEWITQP+E+Y
Sbjct: 1418 ILERIGTVAYKLELPSNAAIHPVFHVSQLKKAIGNIQETQSLDPFVNECHEWITQPEEIY 1477

Query: 301  AYRKNQATKKWEVLVSWKGLPPHKATWENCADLKVQFPKFHLEDKADLEEESDARPPILF 360
            AYRKNQATK+WE LV WKGLPPH+ATWEN ADLKVQFP+FHLEDK DLEEESDARPPILF
Sbjct: 1478 AYRKNQATKEWEALVQWKGLPPHEATWENYADLKVQFPEFHLEDKVDLEEESDARPPILF 1537

Query: 361  TYNRRKKDSNKGTRGSSEESKETGDQ 387
            TYNRRKKD  KGTRG  EESKE G Q
Sbjct: 1538 TYNRRKKD--KGTRGDGEESKEGGPQ 1561

The following BLAST results are available for this feature:

BLAST of Cmc05g0127261 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057462.1	1.6e-205	99.43	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK30159.1 Tran...	[more]
KAA0051400.1	4.7e-205	88.72	putative retroelement pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0063300.1	6.8e-204	88.43	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0041253.1	2.0e-203	88.43	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049776.1	2.2e-202	88.08	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0127261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	6.7e-37	34.29	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	6.7e-37	34.29	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	6.7e-37	34.29	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	6.7e-37	34.29	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	6.7e-37	34.29	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNM4	7.9e-206	99.43	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7U8A5	2.3e-205	88.72	Putative retroelement pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7V7S9	3.3e-204	88.43	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TDM4	9.6e-204	88.43	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U6J3	1.1e-202	88.08	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc05g0127261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 178..198
None	No IPR available	GENE3D	2.40.50.40		coord: 294..344 e-value: 2.0E-5 score: 26.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..392
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 51..327
None	No IPR available	PANTHER	PTHR46148:SF38	PROTEIN NYNRIN-LIKE	coord: 51..327
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..195 e-value: 8.0E-49 score: 167.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..150 score: 18.98317
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 259..339
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0127261.1	Cmc05g0127261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003676	nucleic acid binding