Cmc05g0126371 (gene) Melon (Charmono) v1.1

Overview
NameCmc05g0126371
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCBS domain-containing protein with a domain of unknown function (DUF21)
LocationCMiso1.1chr05: 3580414 .. 3581482 (+)
RNA-Seq ExpressionCmc05g0126371
SyntenyCmc05g0126371
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTACCTATGTTTTAACATATGTTGTAAAAGAAAATGGTTGGTTTTCACTGACTTGCTTCATAATGCAGGAGGAAATTGTAGATGAGGCAGGCGTGTATGTGGATGCCCATAAAAGGTAAACAAATTTCCTTCCTTTTAGCATAAGTCTTATTTAGCTGATTATGTGGTTGAATGTAGAATGTTTCTCAAAATTGTAGGATCCGTGTTAGCTGCGGCTGCAGCTGTGGCACTAGCTCCATCAGCTCGTAGGCTGCCACTTGACAGGCCAAAAGTCCACCGTAAGTTAAAATTTGTCCAATTCCCAAGTTGTCGAGTATTTACTATTGTCTAGCTATTAGCAGCGTTTTTAAAAACAAAAAATTGATCCGACATCAAAGTATACATTTTTCTTGGTTTGTTCTGCTCAATTTTACAAGTCTTTTTCACCAATTATATCCATTTCGTCTGAGTTAAATCGTATAAGATTTTAAAAAATGAACTTCCAAGGTGGTGTTGCAATATCAAGAATACAGGGTAATATTAGGAAGTGCTTCGTTATTTCATGTTTGATTTTTGTCGTCTTTTGTTTTTCACTTTCTTTGCTTTGATAAACAGGCATGTTCAGTAACTCCATGTTTATTTTTTCTCATTACTATGAAAACTTTCCAAGATCTCTCTTCTGTTTCTTCTTCCAAAATAATAAGAAATAGGCGGAAAGGTAGCAAAAACGTTACCCAACGGAGTTTTATTTGCACTATTTGTTGACTAATAAACATGTCTCTAGTGTTGCGAATATATAAGTCTTATAATTAATTTGTAACTCACAGGGAGTTCAAAGTAGGAAAGTCAAGATCCAGGAAAGCTGCGGGAGATTATAGATCCAAATATTCAATGATATTTAAGGATAAGGAGTCACACTGGTACTTCAACCGAGTGATAAAAGATGAACGAATCAACCAAGTTTCCAAAGGAATTCTATTACGTGCGTCACCAAGCTTAAATTCTCCATCTTCTGTAGTTTCGATTATAATTTTTATTTTTAGCTTTAGAATAAATATCATCCTTTGGAAGCTCAGTTAAATGTTA

mRNA sequence

ATGCCTACCTATGTTTTAACATATGTTGTAAAAGAAAATGGTTGGTTTTCACTGACTTGCTTCATAATGCAGGAGGAAATTGTAGATGAGGCAGGCGTGTATGTGGATGCCCATAAAAGAATGTTTCTCAAAATTGTAGGATCCGTGTTAGCTGCGGCTGCAGCTGTGGCACTAGCTCCATCAGCTCGTAGGCTGCCACTTGACAGGCCAAAAGTCCACCGGAGTTCAAAGTAGGAAAGTCAAGATCCAGGAAAGCTGCGGGAGATTATAGATCCAAATATTCAATGATATTTAAGGATAAGGAGTCACACTGGTACTTCAACCGAGTGATAAAAGATGAACGAATCAACCAAGTTTCCAAAGGAATTCTATTACGTGCGTCACCAAGCTTAAATTCTCCATCTTCTGTAGTTTCGATTATAATTTTTATTTTTAGCTTTAGAATAAATATCATCCTTTGGAAGCTCAGTTAAATGTTA

Coding sequence (CDS)

ATGCCTACCTATGTTTTAACATATGTTGTAAAAGAAAATGGTTGGTTTTCACTGACTTGCTTCATAATGCAGGAGGAAATTGTAGATGAGGCAGGCGTGTATGTGGATGCCCATAAAAGAATGTTTCTCAAAATTGTAGGATCCGTGTTAGCTGCGGCTGCAGCTGTGGCACTAGCTCCATCAGCTCGTAGGCTGCCACTTGACAGGCCAAAAGTCCACCGGAGTTCAAAGTAG

Protein sequence

MPTYVLTYVVKENGWFSLTCFIMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK
Homology
[Close]
BLAST of Cmc05g0126371 vs. NCBI nr
Match: XP_038886933.1 (putative DUF21 domain-containing protein At1g03270 isoform X6 [Benincasa hispida])

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA++VA APSARRLPLDR KVHRSSK
Sbjct: 429 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSARRLPLDRSKVHRSSK 482

[Close]
BLAST of Cmc05g0126371 vs. NCBI nr
Match: XP_038886934.1 (putative DUF21 domain-containing protein At1g03270 isoform X7 [Benincasa hispida])

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA++VA APSARRLPLDR KVHRSSK
Sbjct: 427 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSARRLPLDRSKVHRSSK 480

[Close]
BLAST of Cmc05g0126371 vs. NCBI nr
Match: XP_022963505.1 (putative DUF21 domain-containing protein At1g03270 [Cucurbita moschata])

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-08
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA++VA APS RRLPLDR KVHRSSK
Sbjct: 432 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSTRRLPLDRSKVHRSSK 485

[Close]
BLAST of Cmc05g0126371 vs. NCBI nr
Match: XP_023553644.1 (putative DUF21 domain-containing protein At1g03270 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-08
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA++VA APS RRLPLDR KVHRSSK
Sbjct: 464 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSTRRLPLDRSKVHRSSK 517

[Close]
BLAST of Cmc05g0126371 vs. NCBI nr
Match: XP_038886930.1 (putative DUF21 domain-containing protein At1g03270 isoform X3 [Benincasa hispida])

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-08
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           I +EEIVDE  VYVD HKR  +++  +   AA++VA APSARRLPLDR KVHRSSK
Sbjct: 443 IYEEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSARRLPLDRSKVHRSSK 496

[Close]
BLAST of Cmc05g0126371 vs. ExPASy TrEMBL
Match: A0A6J1HI72 (putative DUF21 domain-containing protein At1g03270 OS=Cucurbita moschata OX=3662 GN=LOC111463815 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-08
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA++VA APS RRLPLDR KVHRSSK
Sbjct: 432 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSTRRLPLDRSKVHRSSK 485

[Close]
BLAST of Cmc05g0126371 vs. ExPASy TrEMBL
Match: A0A6J1HSD5 (putative DUF21 domain-containing protein At1g03270 OS=Cucurbita maxima OX=3661 GN=LOC111467005 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.1e-08
Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA++VA APS RRLPLDR KVHR+SK
Sbjct: 432 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAASSVARAPSTRRLPLDRSKVHRNSK 485

[Close]
BLAST of Cmc05g0126371 vs. ExPASy TrEMBL
Match: A0A6J1DS73 (putative DUF21 domain-containing protein At1g03270 OS=Momordica charantia OX=3673 GN=LOC111022702 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-07
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRLPLDRPKVHRSSK 78
           ++QEEIVDE  VYVD HKR  +++  +   AA +VA APSARRL LDR KVH SSK
Sbjct: 423 LLQEEIVDETDVYVDVHKR--IRVAAAAAVAATSVAWAPSARRLTLDRSKVHWSSK 476

[Close]
BLAST of Cmc05g0126371 vs. TAIR 10
Match: AT4G14230.1 (CBS domain-containing protein with a domain of unknown function (DUF21) )

HSP 1 Score: 40.8 bits (94), Expect = 5.8e-04
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 22  IMQEEIVDEAGVYVDAHKRMFLKIVGSVLAAAAAVALAPSARRL 66
           ++QEEIVDE   Y+D HKR+ +  V +V  A +++A APS RRL
Sbjct: 418 LLQEEIVDETDEYIDVHKRIRVATVAAV--AISSLARAPSGRRL 459

The following BLAST results are available for this feature:
BLAST of Cmc05g0126371 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886933.11.6e-0864.29putative DUF21 domain-containing protein At1g03270 isoform X6 [Benincasa hispida... [more]
XP_038886934.11.6e-0864.29putative DUF21 domain-containing protein At1g03270 isoform X7 [Benincasa hispida... [more]
XP_022963505.14.7e-0862.50putative DUF21 domain-containing protein At1g03270 [Cucurbita moschata][more]
XP_023553644.14.7e-0862.50putative DUF21 domain-containing protein At1g03270 [Cucurbita pepo subsp. pepo][more]
XP_038886930.14.7e-0864.29putative DUF21 domain-containing protein At1g03270 isoform X3 [Benincasa hispida... [more]
BLAST of Cmc05g0126371 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc05g0126371 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HI722.3e-0862.50putative DUF21 domain-containing protein At1g03270 OS=Cucurbita moschata OX=3662... [more]
A0A6J1HSD55.1e-0860.71putative DUF21 domain-containing protein At1g03270 OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1DS737.4e-0760.71putative DUF21 domain-containing protein At1g03270 OS=Momordica charantia OX=367... [more]
BLAST of Cmc05g0126371 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14230.15.8e-0450.00CBS domain-containing protein with a domain of unknown function (DUF21) [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc05g0126371.1Cmc05g0126371.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane