Cmc05g0126091 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc05g0126091
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	GCV_T domain-containing protein
Location	CMiso1.1chr05: 3087709 .. 3092716 (-)
RNA-Seq Expression	Cmc05g0126091
Synteny	Cmc05g0126091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGTTCAGAAAGGGTATCGGTGTTATTGTCCCAGTCTAAATAAATATCTTGCCTCTCTCAATGTCTCATTTTCTTAACATTTCTCCTTTAATTCCTCACAATATAACTTTTCGTATACGAGTGGGGAGCATAAGGTGTCAGAGGATGATTTACTTGTCTACAAATTTGTTTTTCCTTTTGGTCCTCTTCTAGATTCATCTCTACCTATGTCTACCTCCATTTGTCCATCTGTCATTAAGGTCTATGATTGATGACAACCTCCTTCGGATCCATGCCCTACACCTGAGGCTTCTTCCTCTCTTTTAGTTCCATGCCCTGTACCAGAGGCTTCTTCGTCATTGGATCTGAAAACGAACGAGGATCTTCCTATTGCTCTTCGTAAAGGTAACATAAGTGCACTAACCCTATTTCCTCTTTTGTTTCATAGAATCATTTGTTGTCTTCTCCATGTTCTTTCATTGCTTCATTAGAGTCTATATCCATCCTTAAAACTGTTCATGAAGCCTTGTCTCATCTTGGTTGGTGTGTTGCAATGGTGGAGGAGATGACTCATTTTAGATGACAATTGTACTTGGGATTTAGTCTTTTCCGGTAGGAAAGAAACACATGGGCTGTAAGTGGTTATTTGTGGTTAAAATTAATCTTGATGGTTTTTTCGTTGGGTTAAAAGCATGTCTTGTAGTGAAAGGCTACCCATAAGTCGTTGACTATGCTTATACTTTTTCTCTAGTACCAAAAATGATATTTGTGAGGTTGTTTATTTCGTTAGCTTCAATCAATTACTGAACTTTACACCAACTTGTTATTAAAAATGCATTTCTTCATGGTGACCTTTAAGAAGAGATGTACATGGAATGAACTTAGCTCAACTAGCATTTATTACAATACATTTTTAAAAAAAGAAGAGGTGTAGCCACCAGGATTTGTTGCTCAAGAGAAGAAGAGAATGATATGTTGCCTTCATAAATCTTTGTATGGTTTGAAATAGAGTCCACAGACTTGGTTTGGCAAATTTAGTCAGGTGATTGAAAGCTTTAGAATGCAAAAGAGCACGTTGGATCAATTGGTCTTTTTTAAGAGATTTGAGAGTGTTGTCATTCTGTTAGTTCTATATGTAGATGATATTGTGATTAATGGTGATGATGCTTTAGGTATCCAGTCCCTAAAGACTTTTCTCCGTTGCCAATTCCAAACAAAAAGTTTGGGCATGTTGAAATACTTCTTAGGAATTGAGGTAATAAGAAGCAAGAAAGGAATATTATTATTTACAAAGAGATGTACTTGACTTGTTGACCGAAACAAGGAAGCTAGGGCCTAAGCCATGTACTAAGTACCCCAATGATGCCTGACTTACAGCTCAAAAAAGATGAAGAATTGCTAAAAGATTCGGAAAGAAATAGGAGGTTAGTGGGAAAACTTAATTACCTTACAGTGACTTGACCCGACATAGCTTATTAAGTGAGAGTATTACGAGCTAGTATATGTCATGCCCCTCAGTTGATCGTTGGAGTGCTTGACAGATTTTGTGTTATCTGAAGGTTGTTCCTGAGTGTGGTTCGTTGTATAAGAATTATGGTCATATTAATATTGAATGTTTCTCAGACATCAATCGGGCAGGATCTAAGAAAGACAAAAAATTAAATTCAAGATATTGTGTTTCTGTTGATGGTAATTTGATTTCTTGAAAGACTAAGAAGCAAAATGTGGTGTCACATTCAAGTGTGGAATCAAAATATAGAGGAATGACACAGTCCATGTGTGAATTGATTTGGATAACTTCTTGTTGAGTTGAGATTTGAAATCACCACACTGACAAAATTTTGGTGTGATAATCAAACAACACTAAATATCGCATCTAATCCAATGTTCCATGAGAGGGGACTAAACATATTAAAGTTGATTGTAATTTTGTACGTAAGAAAATTCAACAAGGTCTGGTATCTACAGGATATGTGAAAATTGGAGAACAATTAGAAGAATCTTCACGAAACAATTGAATGGAACATGTATAGATTCTCTATGTTACAAGTTGGGCATGATTAACATATATGCTCCAACTTTAGGGGGTGTTATAATTCTAATATTAGTTATATTCTCTTATTGTAAATATCTTTGTTATATTTTCCTTTTGTGACTTTTTCTACACTTTCCTTCTTTGGTTACTCTTGTACCTTGTATATATATTTCTTTAGTGAATGCTATAAGCAATTTTGATTCTCTCGAACCTCAAGTGTTTTACGAGAATCAACAGTTTTATTAAATATTTATGAAAAGCATTATTGAAAGCATGACAGAAACTCTCCCCTATCTTGTAAGGGCTGAAAATATGAAAAACAAAAATTAAGTTTGTTCTATCAGTGCCAATTTAGATTAAAAAATTCCAGTGTGGAAATGTATGAGATAATAATTTTGGACTTTGTTATGCAGGTCAATGGCATGCCAATTACTGTGGGGGTGGGAAATGTCATTTCCGAAGAAGGCTTTTCACTGTTGATATCACCTGCTGTTGCTGGACCAGTTTGGAAAGCTTTAGTTTCTCTAGGTGCTGTTCCAATGGGCTCAAGGGCTTGGGAAAAGCTGAGGATATTTCAAGGTGTGCATTTTTTATGTTTTTCTGCTCTTTGATTTGCTGGTTCGCTATTGTCTCATGCACTTGAAATTTCAATGCCATATATGATCATATTGATTCTTTATGATGGATGAAGTTAATAGTGGAATTTACGTAACATGACTTTGCAATCTTTATATCATGATATCATGTTAAATATTCGGTTGAACCTGTCCTGTGTTTTGCAATATTTTTTTATTTTATAATGCTTGAGAGAAAAGTACGTTTAAACAGATAAGTACATCGCCCGAGGTATTAGTATCTGGTAGAGCATGAAGGTAGAATTCTCAAGAAGGTTAAACTTTTGTTTGGCAAATCCTTCATGAAAGAGTCAAGACGTTGTATTTGGTTTTGAAGAAGTCAATTAGTTTGATAGGCTGTAGTATTGTATCCTTGGATGGGGCTTAGGATGTTGACCTCTTCCTATGGAGATGTGGTTATGATTTTCCGACAGAGTTATTCTTTAGTTTATTTTGAATTTTGATATGTTTGGTTTCCTCTTAGATTAACCTAGAGGGCGTAGTTTTATAGTCATTTTCTTTGCCCTGTTGGCATTTATGACTTTGTGGTTCCTTCCGGAGGTTGGGAGGTGTTTGGAACTTTGAGTTAGAAGTCTAGAGTTAATGGGTAGAAGTCTGTATTTGGAGTGTAGAGTTGTTTAGTATGGAGGTAGGAGACATTAGAGGGAAGGGGGGAGAGAGAAAAATGAAGTTCTATGCAAACTTCAATAATAAACACTTTTGTAGTTATTGGAGTTGAGTTATTTAACGCTCATTTATGGAGCCGGTGGGCCAAACACTCCCAGAAAAGAATGTCTGGAGGGGTCAAGGGACACTGAATCTGTTAATCCCCTGTTCGATTACAATTTTCATGCATCCCTAAGTTTTGATGTTCAAGGATTTTTGTAGTTATTTGTTTGAACTTATTTTGCTTGATTAACTCCCTTCTTGTTTTATTTTGCTCCTTTTGTATGGAGTTTTATTTTATATTATTTTTTGTAATTTTTCAATTTTCTCTCCTATCAAAGAAAAACGATTTTGAAACTTGTGGTTAGAACGGAATGCTCAGATCTTCACTGGAAGCAACAAGACATCAATTGGTTCATTGAATCCGCGTATAGAAACACCTTTTGTCACCTTTTGTAATCATTAAGAATTAATCCCCCAGCTGCCTCCTTTCTGTAACTATAGTTTATCATCTATTTTCTATCATTTGGGGTATTGTTTATAATTATCCACATATAGAAACACCTTTTGTCTTCATTTCATGATAAAAATTTAAAAAGAAAAGAAAAGAAAAGAAAAAGTAAAACCATTTTATTTAATGCTGTTACTCCGGGAATCTTGGATGGCCTGATGATTGGCTCGAGTCTTGCAGGAATGCCATCTCCCCAGAAAGAGCTTACCGACGAATTCAATGTACTTGAAGCTGGTCTTTGGAATTCAATTTCTCTCAACAAGGGTACTCATTTCTTGCCTCTCTCTCTCTCTCTTTTTTATTTTATTTTATTTATTTTATTATTATTTTTGACCTATGATTGATCGAACACTCAAATTTTAATCTCTATAGGTTGTTACAAGGGACAAGAGACGATATCTCGATTAATAACTTATGATGGAGTGAAACAGAGATTGTGGGGACTTCAGCTATCAGATTCGGTGGAACCTGGCAGCCCAATAACCATTGATGGAAAAAGGGTACCTATTTCTTTCTATTTTAGATTTAATTTTTTTTATGGAAATTGAAATATTTTGTCAAATACTCCCCTAATCACGAACCTTCCTTTATTTTGTGAAGAGACTGATTATATAGGATTTGAATGTTCTCCAGAACTTCTCTCTGGAGTATTAAAATCTGATGAACTGTCACTGAAAGTTTTCTCCTCGCCTCGAACATCAAACTTCCAAACTCACTAACAGATTCTCCCCTCGACAGTATGAGCATGTTTTCGGTTGAATGTTTATGCATTTTGATCCATGCCAAGAAAATTTGTGTAGGTGGGAAAACTTACAAGCTATGCACCAGGAAGAAAAGAGTCGGAGCATTTTGGTCTTGGCTACATAAAGAAGAAAGCTGCTTCCATTGGAGATACTGTAATTGTTGGAGAAGACACCACTGGTATGGTGGTGGAAGTTCCATTTTTAGCTCGACAACAACCTCTATCCAACAGCTCACCAAGTAGCACTCCTGAAAGCAGTGCACAATAGTTGTTTTTTATTACTATTTCAATGGGGTTGAGTTGAACCACAGCTCTATATTTTCTTTAATAATTTTAGATATGGATGCTAAGGACGATGGTTTTTGAACCCTGTTTGTGCATATCATCAGGGGTTTTCTTTGTTGTTCAACCGTATTTTTAATGCAAAATCACATTTGGTGTATATATTGTAAGGTCTTC

mRNA sequence

TTGTGTTCAGAAAGGGTATCGGTGTTATTGTCCCAGTCTAAATAAATATCTTGCCTCTCTCAATGTCTCATTTTCTTAACATTTCTCCTTTAATTCCTCACAATATAACTTTTCGTATACGAGTGGGGAGCATAAGGTGTCAGAGGATGATTTACTTGTCTACAAATTTGTTTTTCCTTTTGGTCCTCTTCTAGATTCATCTCTACCTATGTCTACCTCCATTTGTCCATCTGTCATTAAGGTCTATGATTGATGACAACCTCCTTCGGATCCATGCCCTACACCTGAGGCTTCTTCCTCTCTTTTAGTTCCATGCCCTGTACCAGAGGCTTCTTCGTCATTGGATCTGAAAACGAACGAGGATCTTCCTATTGCTCTTCGTAAAGGTCAATGGCATGCCAATTACTGTGGGGGTGGGAAATGTCATTTCCGAAGAAGGCTTTTCACTGTTGATATCACCTGCTGTTGCTGGACCAGTTTGGAAAGCTTTAGTTTCTCTAGGTGCTGTTCCAATGGGCTCAAGGGCTTGGGAAAAGCTGAGGATATTTCAAGGAATGCCATCTCCCCAGAAAGAGCTTACCGACGAATTCAATGTACTTGAAGCTGGTCTTTGGAATTCAATTTCTCTCAACAAGGGTTGTTACAAGGGACAAGAGACGATATCTCGATTAATAACTTATGATGGAGTGAAACAGAGATTGTGGGGACTTCAGCTATCAGATTCGGTGGAACCTGGCAGCCCAATAACCATTGATGGAAAAAGGGTACCTATTTCTTTCTATTTTAGATTTAATTTTTTTTATGGAAATTGAAATATTTTGTCAAATACTCCCCTAATCACGAACCTTCCTTTATTTTGTGAAGAGACTGATTATATAGGATTTGAATGTTCTCCAGAACTTCTCTCTGGAGTATTAAAATCTGATGAACTGTCACTGAAAGTTTTCTCCTCGCCTCGAACATCAAACTTCCAAACTCACTAACAGATTCTCCCCTCGACAGTATGAGCATGTTTTCGGTTGAATGTTTATGCATTTTGATCCATGCCAAGAAAATTTGTGTAGGTGGGAAAACTTACAAGCTATGCACCAGGAAGAAAAGAGTCGGAGCATTTTGGTCTTGGCTACATAAAGAAGAAAGCTGCTTCCATTGGAGATACTGTAATTGTTGGAGAAGACACCACTGGTATGGTGGTGGAAGTTCCATTTTTAGCTCGACAACAACCTCTATCCAACAGCTCACCAAGTAGCACTCCTGAAAGCAGTGCACAATAGTTGTTTTTTATTACTATTTCAATGGGGTTGAGTTGAACCACAGCTCTATATTTTCTTTAATAATTTTAGATATGGATGCTAAGGACGATGGTTTTTGAACCCTGTTTGTGCATATCATCAGGGGTTTTCTTTGTTGTTCAACCGTATTTTTAATGCAAAATCACATTTGGTGTATATATTGTAAGGTCTTC

Coding sequence (CDS)

ATGCCAATTACTGTGGGGGTGGGAAATGTCATTTCCGAAGAAGGCTTTTCACTGTTGATATCACCTGCTGTTGCTGGACCAGTTTGGAAAGCTTTAGTTTCTCTAGGTGCTGTTCCAATGGGCTCAAGGGCTTGGGAAAAGCTGAGGATATTTCAAGGAATGCCATCTCCCCAGAAAGAGCTTACCGACGAATTCAATGTACTTGAAGCTGGTCTTTGGAATTCAATTTCTCTCAACAAGGGTTGTTACAAGGGACAAGAGACGATATCTCGATTAATAACTTATGATGGAGTGAAACAGAGATTGTGGGGACTTCAGCTATCAGATTCGGTGGAACCTGGCAGCCCAATAACCATTGATGGAAAAAGGGTACCTATTTCTTTCTATTTTAGATTTAATTTTTTTTATGGAAATTGA

Protein sequence

MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITIDGKRVPISFYFRFNFFYGN

Homology

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BLAST of Cmc05g0126091 vs. NCBI nr
Match: XP_008449403.1 (PREDICTED: putative transferase At1g60990, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 165 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 224

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 225 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 284

Query: 121 GKRV 125
           GKRV
Sbjct: 285 GKRV 288

[Close]

BLAST of Cmc05g0126091 vs. NCBI nr
Match: XP_008449404.1 (PREDICTED: putative transferase At1g60990, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 127 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 186

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 187 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 246

Query: 121 GKRV 125
           GKRV
Sbjct: 247 GKRV 250

[Close]

BLAST of Cmc05g0126091 vs. NCBI nr
Match: KAA0057343.1 (putative transferase [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 139 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 198

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 199 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 258

Query: 121 GKRV 125
           GKRV
Sbjct: 259 GKRV 262

[Close]

BLAST of Cmc05g0126091 vs. NCBI nr
Match: XP_008449402.1 (PREDICTED: putative transferase At1g60990, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 221 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 280

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 281 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 340

Query: 121 GKRV 125
           GKRV
Sbjct: 341 GKRV 344

[Close]

BLAST of Cmc05g0126091 vs. NCBI nr
Match: TYK13394.1 (putative transferase [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 254 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 313

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 314 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 373

Query: 121 GKRV 125
           GKRV
Sbjct: 374 GKRV 377

[Close]

BLAST of Cmc05g0126091 vs. ExPASy Swiss-Prot
Match: Q681Y3 (Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g60990 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-48
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG++IS+EGF++L+SP  A  VWK L++ GA+PMGS AWEKLRI QG P+P++E
Sbjct: 249 MPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERE 308

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           L+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+D
Sbjct: 309 LSKEFNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVD 368

Query: 121 GKRV 125
           GK+V
Sbjct: 369 GKKV 372

[Close]

BLAST of Cmc05g0126091 vs. ExPASy Swiss-Prot
Match: Q1AR89 (Aminomethyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=gcvT PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.1e-09
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 13  EEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKELTDEFNVLEAGL 72
           E+GF + + PA A  +W+ LV  GA P G  A + LR+  GM     EL +E   LEAG+
Sbjct: 198 EDGFEVFLRPAEAPSLWRRLVEAGAAPAGLGARDTLRLEAGMCLYGNELDEETTPLEAGI 257

Query: 73  WNSISLNK-GCYKGQETISRLITYDGVKQRLWGLQLSDS--VEPGSPITIDGKRVPI 127
             ++ L+K   + GQ  + R     G++++L G +L        G P+ + G+R  +
Sbjct: 258 SFAVHLHKEEEFVGQRALQRQ-RERGLRKKLVGFELEGRGIARHGYPVAVGGERAGV 313

[Close]

BLAST of Cmc05g0126091 vs. ExPASy Swiss-Prot
Match: Q67N36 (Aminomethyltransferase OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=gcvT PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.8e-08
Identity = 36/119 (30.25%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 13  EEGFSLLISPAVAGPVWKALVSL----GAVPMGSRAWEKLRIFQGMPSPQKELTDEFNVL 72
           E+GF + +       +W+AL+      G +P G  A + LR    +P    E++D+ N L
Sbjct: 201 EDGFEIYVKAEDVAALWEALLEAGDEQGLLPCGLGARDTLRFEAKLPLYGHEISDQHNPL 260

Query: 73  EAGLWNSISLNKGC-YKGQETISRLITYDGVKQRLWGLQLSDSVEP--GSPITIDGKRV 125
           EAGL  ++ L KG  + G++ ++R I   G  ++L G+++ D   P  G P+ + G+ V
Sbjct: 261 EAGLGFAVKLKKGVDFIGRDALAR-IKEQGPTRKLVGIEMIDRGVPRQGYPVAVGGEVV 318

[Close]

BLAST of Cmc05g0126091 vs. ExPASy Swiss-Prot
Match: Q1INT8 (Aminomethyltransferase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=gcvT PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 12  SEEGFSLLI--SPAVAGPVWKALV----SLGAVPMGSRAWEKLRIFQGMPSPQKELTDEF 71
           +E+GF + I    A +  VW  L+      G VP G  +   LR+   +P    E++DE 
Sbjct: 202 AEDGFEIYIPSDAATSDRVWNELLQAGKEFGVVPAGLGSRNTLRLEGKLPLYGHEISDEI 261

Query: 72  NVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSP------ITI 125
           NV EAGL   + ++KG + G+  + +    DGVK+ L GL   +++E G P      + +
Sbjct: 262 NVWEAGLDRFLKMDKGDFIGRAALEK-AKNDGVKRALVGL---ETIERGIPRDGYKVLDL 321

[Close]

BLAST of Cmc05g0126091 vs. ExPASy Swiss-Prot
Match: B0KD95 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=gcvT PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.3e-06
Identity = 30/118 (25.42%), Postives = 61/118 (51.69%), Query Frame = 0


Query: 13  EEGFSLLISPAVAGPVWKALVSL----GAVPMGSRAWEKLRIFQGMPSPQKELTDEFNVL 72
           E+GF + +    A  +W+ ++ +    G  P G  A + LR   G+P    EL++E   L
Sbjct: 195 EDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLGARDTLRFEAGLPLYGNELSEEITPL 254

Query: 73  EAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEP--GSPITIDGKRV 125
           EAG    +  +KG + G++ + +    +G+K+++ G ++ D+  P  G  +  D +++
Sbjct: 255 EAGFEFFVKFDKGNFIGKDALLKQ-KEEGLKRKIVGFEMIDNGIPRHGYEVRADNQKI 311

[Close]

BLAST of Cmc05g0126091 vs. ExPASy TrEMBL
Match: A0A5A7UN60 (Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G001980 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 139 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 198

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 199 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 258

Query: 121 GKRV 125
           GKRV
Sbjct: 259 GKRV 262

[Close]

BLAST of Cmc05g0126091 vs. ExPASy TrEMBL
Match: A0A5D3CQT8 (Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00010 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 254 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 313

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 314 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 373

Query: 121 GKRV 125
           GKRV
Sbjct: 374 GKRV 377

[Close]

BLAST of Cmc05g0126091 vs. ExPASy TrEMBL
Match: A0A1S3BML1 (putative transferase At1g60990, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491300 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 165 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 224

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 225 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 284

Query: 121 GKRV 125
           GKRV
Sbjct: 285 GKRV 288

[Close]

BLAST of Cmc05g0126091 vs. ExPASy TrEMBL
Match: A0A1S3BMW1 (putative transferase At1g60990, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491300 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 127 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 186

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 187 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 246

Query: 121 GKRV 125
           GKRV
Sbjct: 247 GKRV 250

[Close]

BLAST of Cmc05g0126091 vs. ExPASy TrEMBL
Match: A0A1S3BLY7 (putative transferase At1g60990, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491300 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG+VISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE
Sbjct: 221 MPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 280

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID
Sbjct: 281 LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 340

Query: 121 GKRV 125
           GKRV
Sbjct: 341 GKRV 344

[Close]

BLAST of Cmc05g0126091 vs. TAIR 10
Match: AT1G60990.1 (Glycine cleavage T-protein family )

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG++IS+EGF++L+SP  A  VWK L++ GA+PMGS AWEKLRI QG P+P++E
Sbjct: 249 MPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERE 308

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           L+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+D
Sbjct: 309 LSKEFNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVD 368

Query: 121 GKRV 125
           GK+V
Sbjct: 369 GKKV 372

[Close]

BLAST of Cmc05g0126091 vs. TAIR 10
Match: AT1G60990.2 (Glycine cleavage T-protein family )

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG++IS+EGF++L+SP  A  VWK L++ GA+PMGS AWEKLRI QG P+P++E
Sbjct: 249 MPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERE 308

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           L+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+D
Sbjct: 309 LSKEFNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVD 368

Query: 121 GKRV 125
           GK+V
Sbjct: 369 GKKV 372

[Close]

BLAST of Cmc05g0126091 vs. TAIR 10
Match: AT1G60990.3 (Glycine cleavage T-protein family )

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-49
Identity = 90/124 (72.58%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRIFQGMPSPQKE 60
           MPITVGVG++IS+EGF++L+SP  A  VWK L++ GA+PMGS AWEKLRI QG P+P++E
Sbjct: 249 MPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERE 308

Query: 61  LTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITID 120
           L+ EFNVLEAGLWNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+D
Sbjct: 309 LSKEFNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVD 368

Query: 121 GKRV 125
           GK+V
Sbjct: 369 GKKV 372

The following BLAST results are available for this feature:

BLAST of Cmc05g0126091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449403.1	8.3e-64	99.19	PREDICTED: putative transferase At1g60990, chloroplastic isoform X2 [Cucumis mel...	[more]
XP_008449404.1	8.3e-64	99.19	PREDICTED: putative transferase At1g60990, chloroplastic isoform X3 [Cucumis mel...	[more]
KAA0057343.1	8.3e-64	99.19	putative transferase [Cucumis melo var. makuwa]	[more]
XP_008449402.1	8.3e-64	99.19	PREDICTED: putative transferase At1g60990, chloroplastic isoform X1 [Cucumis mel...	[more]
TYK13394.1	8.3e-64	99.19	putative transferase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc05g0126091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681Y3	2.3e-48	72.58	Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q1AR89	6.1e-09	32.48	Aminomethyltransferase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129...	[more]
Q67N36	8.8e-08	30.25	Aminomethyltransferase OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX...	[more]
Q1INT8	2.6e-07	31.20	Aminomethyltransferase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=g...	[more]
B0KD95	6.3e-06	25.42	Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223...	[more]

BLAST of Cmc05g0126091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UN60	4.0e-64	99.19	Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280...	[more]
A0A5D3CQT8	4.0e-64	99.19	Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496...	[more]
A0A1S3BML1	4.0e-64	99.19	putative transferase At1g60990, chloroplastic isoform X2 OS=Cucumis melo OX=3656...	[more]
A0A1S3BMW1	4.0e-64	99.19	putative transferase At1g60990, chloroplastic isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A1S3BLY7	4.0e-64	99.19	putative transferase At1g60990, chloroplastic isoform X1 OS=Cucumis melo OX=3656...	[more]

BLAST of Cmc05g0126091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60990.1	1.6e-49	72.58	Glycine cleavage T-protein family	[more]
AT1G60990.2	1.6e-49	72.58	Glycine cleavage T-protein family	[more]
AT1G60990.3	1.6e-49	72.58	Glycine cleavage T-protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017703	YgfZ/GcvT conserved site	TIGRFAM	TIGR03317	TIGR03317	coord: 44..106 e-value: 2.2E-19 score: 67.2
IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1	GENE3D	3.30.1360.120	Probable tRNA modification gtpase trme; domain 1	coord: 4..126 e-value: 1.9E-26 score: 95.1
IPR006222	Aminomethyltransferase, folate-binding domain	PFAM	PF01571	GCV_T	coord: 11..72 e-value: 5.5E-8 score: 32.5
None	No IPR available	PANTHER	PTHR13847	SARCOSINE DEHYDROGENASE-RELATED	coord: 1..124
None	No IPR available	PANTHER	PTHR13847:SF262	MALATE:QUINONE OXIDOREDUCTASE	coord: 1..124
None	No IPR available	SUPERFAMILY	103025	Folate-binding domain	coord: 4..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc05g0126091.1	Cmc05g0126091.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding