Cmc05g0125601 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATGATCCTTTCCTTTGCTGGTTGTCATAGTTCGAACAAATTGACCTTTTTGCTCTTGGCTTGGCGCTTTGTATCTAATATTTTCTTCTTCCTTAAGCTATAAGAAGAAACCGCAATAGGATCTCTCACTCTCAGCTTTTTGTAGACCTAGCCGGAGCCGCCACACCGATAACTAATAACAATGAGCAAGAGACCCTCTGGGACCACGCAAGCATTTTTCGTCTTCTCAGCCTTGGCGATGGGTTGGCTCGCCATTGAGATGGCTTTCAAACCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAAATCTGATCCCGCTCGGGATCCTGACGAACTTGTCGATAACCAATCCGATCACACCTCATCTGATGACGATCAAAGTACCATTGTCACTTCTTAAACCAGCAATCTCAAGGTACGCTTGACAGAGTGGGATGATGGTGAATGGTTTGCCCCCATCGTGTTCTGGTCTTACTGTACGAAATTTGGAATTTTAGATCTCACCCCTCTGTATCGTATAGGTTCAGTACTACCGTTTTAATTGAATTAATAGTGATTCAGTTTTTACTTTTAGAATTTGTGCCTCTACAATTGGTATGTGTTTGTTTTGGCTACTGTAAATCTAACTACAAGCTTGGAACTTGGAGATATATCGATTACCTGTTCGAGGAATGGTTTAAAAAGAAATAAGGTGTTTATAACATGTTTAATGTGGTAGGTTTGTGACAATGCAGCTACGTGTTGCACACTTCTGCATAAGAATGAACTGAATCAAAGCCCCTGCTCATGAGCTTTCTCATATACAAATTACTCTCTTTTGAAGATTAGTTTGGTAGAAACAAAGGCTTGTGTATTGGAAATCATTTTCTCTGGTGCCCACTGTAGAGTTAATTTTTAAATTAGATGTTGTCAAATGTTATTTGGGTGATTTGGCCTTATCATGACGATGTTGGAACTGACAACTCATATTAGACAACAAATTTGAGTAAAACCGGCAATTGACCCAAATTTGGTTATGCAATGACTCGAATTCTAAAATTAATGAAAGCTAACCTTTTACTTATGTCACAAGGCATTTAGATTGCTTTGGCTACTTTCTTTGGCCCTCATTTGTGCTCCTTCCCCATATCCTCGCGCTCATGTTTCTCATTCTCGTCTTCAAACATTGGAAGAAAAGCCATCCTCACATTTCTCTTTCAGATCACCGTAGTCGTGATAAACGGTTGAAAGGTGGCTAGAAGCACGATCATAACGGTTAGTTGGAGCAAGTGATGAATGGTCAGATGGTGGCTTGAAGCATGGTCATCGAAGGGGGTGATGAACACTCGGACAGAGCCCCAAGTGCGGGAGAGAGAGGGAGGGAAGAAGGAAGAAGCATGCGGGAGAAAGAGAGGGAAGAAGGCAGTGAGAGTGGGTGGGGGTGCGGGGGTAGTGCTACCTCAGCTTATTGCATAAGCCAAAGGTTAGTATTGAATTTATTGTTTTCAAAATTTGGGTCATACGACAGTAACACAATGCAGACTTGGGTCATACAACAGCAACACAATGCAGATTGGATCATCTGTACAAAAAAAACTCATAAACTACAATCCGTTAGCCTATTTCAGTTTTTGAAAATCCATCATCTGATATGTCTTCTCGTTTCCTTTTATTTCTTCGTGAAGGAGGGTGGCTCATCTGTTGGGACAAAAAGGAAGGAATGGAGAGACAACGATGCAAATGGTTGCATCTGAATTATTGAATAAACATGATCAAAGCGAGAGAGCTTTCATCTATCTGGGTGTAGCGTTTGGAAAAAAGAAAAAAAAGATTCTACAAAAAAACATTTTTCCAGCCAATCTTTGAGCTTCTTGTTCTAATTTCTGAAATGTTAAGATATGATTGCGAGATTTTTGTTTTCTGAATTAGAGTAACTCCAACATTAAACACGACTCATCTGCTTTGACTTAGTTGAACAACCATACATCTAACACTTGTTGCTTTTTCAAGCATCATATCATAGAAAAACACCAAACAGCATCCTGATATCTTCCTTTAAAAAGAAAAAGTAAAAAGACAATTCCCAGTCTGGACCAATCCAAATAAGACAAATGAAAGACAAGGAAGTGAATAACATTCAGACCACTAGTCTAATCATCGAATGGGTATTGCTCATACCTAATTGTACAGTCATTGAGCACTGAACGACCCCCAATTCTCTTTTGACACGAGCCCAACATGTTGTTCTCAGCAGCCTCAAGACAAGAAGTGCAGTCTGAGGTCGTGAGATTCTGGTTGCAGGAAGCATGACCATAAGCGAAGGCATTAGGATAAGGAGATATGTTGTAGAAATCATAGTTCTTTATAGTGGGAGTTGCACTCTGCAATTCTTTTAGAACGTAATCCAGACTCACTGCAAAAGGATCTCCCCCTGTGAAAGTTCCGGAATTGCACAAAACTGACCTCACTCCAGTGTTCGGAATGCTCACCACCATAATAGACACCGCAAAGAAAGCGAGAAAAGCCACTGAAATCTTCAGACTAGAACCAATCATCCTTCTTCTTCTCTTGATTTTGATCTGCTTTACGTTTAAAAAGGCATTTGACGTTGAAGCAGAAGGGGGTCCCTAGGTATTTTCTTGCGACAAATTGTTTGATGCTTTGTCTTGTTCTCTGGGTTTGACTTTGACCCATTCATTTGCCTTTGGTCTCTTCTATAAAGTTAATTTTTTTCTTAGTTTTCCAAGGAGAAAACAAAGAGTTCTATGCACAATTTTAACTTCTTTTGGTGTAATAATTGCATACTAATCAAAATAGTTCCCATGTAGATTTCTATTCATAAGAAAATAGGTACGTCTTTATTGTCATAGCCGTATAATTCCCTACATTCTGAAACTGGATTTTGAAGTAGTTAGAGTTTCATTTTGTAGGGTTCAAGTAACGGTATAACACTCGTTTTGTTTGTAATCTGGGTAGAAGCAAATTCTTATGAGCTAGAACCTTTAACCAATAGGATTTTCTCGACCTAATGGATAAACATTTGTTACAAATAGGAAATTCTTTCTCATATAAAATTGAAAATTAAAAATTGAGATGATTGAATCTGCTTCAAGAGAAATCATAAATTTGGGAAATTGTCATAAATAACCCAATAAAATTTCATCAAGCATAGGTAGGACAATTTTTGATAATTCATTATAATAGTTTTCTCGTTTCTTTCAACTCAAATTGATTTCAAGATTTGAATAAAAATGTTACTTTTTTTCATTATATATCCGAACCATAGACTTTTTTGGGCTGTCTTAGTGGAATTTCGGCTAGGATAAATACTAGGATCTTATTTCTCAAAATTGAACTTTTCTTTTTCTTGAAACAAAATCCAAGTTTTGAACACCCTAATATCCGATTTTCTTCTGGGGGGTTAATGAAGGATTCAGTAAACACTTTTGGAAACATAAAATGAGTGTAAAATTTGAGAATTTGTTGAAGATTTGAAAAAATTACATAAGATTCATAAGATTCGAAAAAAGATTATGTACAATCCTGGTCTTGTTTGTGATATAATCTTGGTTAGAGTTATGGTATGTGCACCAAATTACTATTAGTTATGTTATATTCTAGTAGAATGAGTGTTGGGTGATCCAGTAGCTTAGTAAATGACTCATTCCAAGTTGAATCAGTGGCTTGTTTGTAATGGAGACAGAGGTTGACATATTTCACTCACCTCTAGTAGACTTGGGGTTGCCATTGGAAAGCACCCAACTTCTGTCATTTAAGAAAAAAAGAAATACTTCCACTTCCTCCTTCACTCTTATCTCAAATCTCAAGCAAATATGCTTTGTGCCTCATTTGCAACTTTCTTAAGACAGTTTTTTTCAAAGCATTATAAGGTCAGTGAGAAAGTTCTTGAATGAAAAAAATTGTTGTTTTATCTAAAAGCTATAATCTATGGTAGATAATATCATAATCAACTCCTCATAAGTAATAAACGAATTTTCAACATAGCCCACATGGATAAAATCTTTGGAAGACAACTAAAAGTCTAAAAGTAATGATCCTTAAAGACTTTATGTAAACCAAAAGTTGTAAGACTATCACATATAGTAGGATTTGTAAAAGTTGTTAGAGATCTAGAGTGTACAAGTAACAACAATATCTCCATGGAGGAATTAAGAAACAAAACTATGTGGACTTAGGTTAGGTTTAAAAGCAAATACATGTTAACTTTAATTCTTAGTGAGCAATATTTTAATATTGTGAAGATACACTAAGATTTCTTGTCCTAACTCCCTCATCTCTCAGAGTTGCCTTATTAGGATGAAAATCCATGTTTATTACTTTATAGTTTTTAATATCTCAAAAAGATGCCTACTTTTTTTATCCTTCCAGATTGAATTTTCTTTTGTTTAAGTCTGCACTTATTTAAATGGATCCAACTGAGTGCAGAGCCATCTGCTACAATTCCTTTGTCAATTAACGTGTTTCTTCCACTCTGAGAAGAAACTGTTTTTGTTATTCATTCTCCTTCAAACCCACTTTTCCTTTTCAATTTTAATATTATATTATGCAGATAATCATAATATGGAGATCCTCAATACTATGAACCAATAAGGAAGAAGATTTTGGGGGCCAATATGGAGTCTTAGTATGTAGTTATAGTTTTACTTTTTGTGATGTGATTGCAATGGGAGCACTGGAACCTGTATATTGTAGTGTGATCACTTGAGACAGAGTTGTTGATTCAAAAGTTGAGATTGAGGGACCTTTAGCTAATTTCAGAAGAAACTAGAAATTCTAAAATCAAAGTCATCTGTTATTCTCTTATTTAACTATGTTGAAATGGTTTTGATCTCATCTCCTGTATCAAGTAAAAAGTTGGAAGTTGGAAAGTTATGTTCTCTAACAGTTTAGAAGCGAATTCTATGTCTGTTTGACGTGA TGATGATCCTTTCCTTTGCTGGTTGTCATAGTTCGAACAAATTGACCTTTTTGCTCTTGGCTTGGCGCTTTGTATCTAATATTTTCTTCTTCCTTAAGCTATAAGAAGAAACCGCAATAGGATCTCTCACTCTCAGCTTTTTGTAGACCTAGCCGGAGCCGCCACACCGATAACTAATAACAATGAGCAAGAGACCCTCTGGGACCACGCAAGCATTTTTCGTCTTCTCAGCCTTGGCGATGGGTTGGCTCGCCATTGAGATGGCTTTCAAACCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAAATCTGATCCCGCTCGGGATCCTGACGAACTTGTCGATAACCAATCCGATCACACCTCATCTGATGACGATCAAAGTACCATTGTCACTTCTTAAACCAGCAATCTCAAGGTACGCTTGACAGAGTGGGATGATGGTGAATGGTTTGCCCCCATCGTGTTCTGGTCTTACTGTACGAAATTTGGAATTTTAGATCTCACCCCTCTGTATCGTATAGGTTCAGTACTACCGTTTTAATTGAATTAATAGTGATTCAGTTTTTACTTTTAGAATTTGTGCCTCTACAATTGGTATGTGTTTGTTTTGGCTACTGTAAATCTAACTACAAGCTTGGAACTTGGAGATATATCGATTACCTGTTCGAGGAATGGTTTAAAAAGAAATAAGGTGTTTATAACATGTTTAATGTGGTAGGTTTGTGACAATGCAGCTACGTGTTGCACACTTCTGCATAAGAATGAACTGAATCAAAGCCCCTGCTCATGAGCTTTCTCATATACAAATTACTCTCTTTTGAAGATTAGTTTGGTAGAAACAAAGGCTTGTGTATTGGAAATCATTTTCTCTGGTGCCCACTGTAGAGTTAATTTTTAAATTAGATGTTGTCAAATGTTATTTGGGTGATTTGGCCTTATCATGACGATGTTGGAACTGACAACTCATATTAGACAACAAATTTGAGTAAAACCGGCAATTGACCCAAATTTGGTTATGCAATGACTCGAATTCTAAAATTAATGAAAGCTAACCTTTTACTTATGTCACAAGGCATTTAGATTGCTTTGGCTACTTTCTTTGGCCCTCATTTGTGCTCCTTCCCCATATCCTCGCGCTCATGTTTCTCATTCTCGTCTTCAAACATTGGAAGAAAAGCCATCCTCACATTTCTCTTTCAGATCACCGTAGTCGTGATAAACGGTTGAAAGGTGGCTAGAAGCACGATCATAACGGTTAGTTGGAGCAAGTGATGAATGGTCAGATGGTGGCTTGAAGCATGGTCATCGAAGGGGGTGATGAACACTCGGACAGAGCCCCAAGTGCGGGAGAGAGAGGGAGGGAAGAAGGAAGAAGCATGCGGGAGAAAGAGAGGGAAGAAGGCAGTGAGAGTGGGTGGGGGTGCGGGGGTAGTGCTACCTCAGCTTATTGCATAAGCCAAAGGTTAGTATTGAATTTATTGTTTTCAAAATTTGGGTCATACGACAGTAACACAATGCAGACTTGGGTCATACAACAGCAACACAATGCAGATTGGATCATCTGTACAAAAAAAACTCATAAACTACAATCCGTTAGCCTATTTCAGTTTTTGAAAATCCATCATCTGATATGTCTTCTCGTTTCCTTTTATTTCTTCGTGAAGGAGGGTGGCTCATCTGTTGGGACAAAAAGGAAGGAATGGAGAGACAACGATGCAAATGGTTGCATCTGAATTATTGAATAAACATGATCAAAGCGAGAGAGCTTTCATCTATCTGGGTGTAGCGTTTGGAAAAAAGAAAAAAAAGATTCTACAAAAAAACATTTTTCCAGCCAATCTTTGAGCTTCTTGTTCTAATTTCTGAAATGTTAAGATATGATTGCGAGATTTTTGTTTTCTGAATTAGAGTAACTCCAACATTAAACACGACTCATCTGCTTTGACTTAGTTGAACAACCATACATCTAACACTTGTTGCTTTTTCAAGCATCATATCATAGAAAAACACCAAACAGCATCCTGATATCTTCCTTTAAAAAGAAAAAGTAAAAAGACAATTCCCAGTCTGGACCAATCCAAATAAGACAAATGAAAGACAAGGAAGTGAATAACATTCAGACCACTAGTCTAATCATCGAATGGGTATTGCTCATACCTAATTGTACAGTCATTGAGCACTGAACGACCCCCAATTCTCTTTTGACACGAGCCCAACATGTTGTTCTCAGCAGCCTCAAGACAAGAAGTGCAGTCTGAGGTCGTGAGATTCTGGTTGCAGGAAGCATGACCATAAGCGAAGGCATTAGGATAAGGAGATATGTTGTAGAAATCATAGTTCTTTATAGTGGGAGTTGCACTCTGCAATTCTTTTAGAACGTAATCCAGACTCACTGCAAAAGGATCTCCCCCTGTGAAAGTTCCGGAATTGCACAAAACTGACCTCACTCCAGTGTTCGGAATGCTCACCACCATAATAGACACCGCAAAGAAAGCGAGAAAAGCCACTGAAATCTTCAGACTAGAACCAATCATCCTTCTTCTTCTCTTGATTTTGATCTGCTTTACGTTTAAAAAGGCATTTGACGTTGAAGCAGAAGGGGGTCCCTAGATAATCATAATATGGAGATCCTCAATACTATGAACCAATAAGGAAGAAGATTTTGGGGGCCAATATGGAGTCTTAGTATGTAGTTATAGTTTTACTTTTTGTGATGTGATTGCAATGGGAGCACTGGAACCTGTATATTGTAGTGTGATCACTTGAGACAGAGTTGTTGATTCAAAAGTTGAGATTGAGGGACCTTTAGCTAATTTCAGAAGAAACTAGAAATTCTAAAATCAAAGTCATCTGTTATTCTCTTATTTAACTATGTTGAAATGGTTTTGATCTCATCTCCTGTATCAAGTAAAAAGTTGGAAGTTGGAAAGTTATGTTCTCTAACAGTTTAGAAGCGAATTCTATGTCTGTTTGACGTGA ATGAGCAAGAGACCCTCTGGGACCACGCAAGCATTTTTCGTCTTCTCAGCCTTGGCGATGGGTTGGCTCGCCATTGAGATGGCTTTCAAACCCTTCCTCGATAAGGCCCGCTCCGCCATGGACAAATCTGATCCCGCTCGGGATCCTGACGAACTTGTCGATAACCAATCCGATCACACCTCATCTGATGACGATCAAAGTACCATTGTCACTTCTTAA MSKRPSGTTQAFFVFSALAMGWLAIEMAFKPFLDKARSAMDKSDPARDPDELVDNQSDHTSSDDDQSTIVTS Homology
BLAST of Cmc05g0125601 vs. NCBI nr
Match: KAA0057297.1 (6.7 kDa chloroplast outer envelope membrane protein [Cucumis melo var. makuwa] >TYK13436.1 6.7 kDa chloroplast outer envelope membrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc05g0125601 vs. NCBI nr
Match: XP_038888886.1 (outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888887.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888888.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888889.1 outer envelope membrane protein 7-like [Benincasa hispida]) HSP 1 Score: 114.8 bits (286), Expect = 3.1e-22 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Cmc05g0125601 vs. NCBI nr
Match: XP_022155586.1 (outer envelope membrane protein 7-like [Momordica charantia]) HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20 Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of Cmc05g0125601 vs. NCBI nr
Match: XP_023553591.1 (outer envelope membrane protein 7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of Cmc05g0125601 vs. NCBI nr
Match: XP_022967520.1 (outer envelope membrane protein 7-like [Cucurbita maxima] >XP_022967521.1 outer envelope membrane protein 7-like [Cucurbita maxima]) HSP 1 Score: 104.8 bits (260), Expect = 3.3e-19 Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of Cmc05g0125601 vs. ExPASy Swiss-Prot
Match: Q9SVC4 (Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 8.4e-10 Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of Cmc05g0125601 vs. ExPASy TrEMBL
Match: A0A5A7URM9 (6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00570 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.3e-29 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Cmc05g0125601 vs. ExPASy TrEMBL
Match: A0A6J1DS29 (outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC111022685 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.4e-21 Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of Cmc05g0125601 vs. ExPASy TrEMBL
Match: A0A6J1HUQ5 (outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111467002 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of Cmc05g0125601 vs. ExPASy TrEMBL
Match: A0A6J1HGS4 (outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111463949 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-19 Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of Cmc05g0125601 vs. ExPASy TrEMBL
Match: A0A0A0KJE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.3e-16 Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of Cmc05g0125601 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 ) HSP 1 Score: 63.9 bits (154), Expect = 5.9e-11 Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of Cmc05g0125601 vs. TAIR 10
Match: AT3G63160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04 Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|